RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 CCL22O00626 93 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 S1PR2O95136 353 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 WISP3O95389 354 aaPredicted RBP3□□□□□ -1.93
HMGB3-203ENST00000430118 CGAP01215 116 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 TYMSP04818 313 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 CSN2P05814 226 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 CXCL1P09341 107 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 RPS4Y1P22090 263 aaKnown RBP3□□□□□ -1.93
HMGB3-203ENST00000430118 CTRLP40313 264 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 MTPNP58546 118 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 SELENOWP63302 87 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 PAFAH1B2P68402 229 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 CRADDP78560 199 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 GGTLC2Q14390 218 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 POU2AF1Q16633 256 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 C14orf177Q52M58 125 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 GCSAMLQ5JQS6 135 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 UBE2NLQ5JXB2 153 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 C1orf100Q5SVJ3 147 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 Q6ZN92 141 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 NEGR1Q7Z3B1 354 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 VN1R4Q7Z5H5 301 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 APRG1Q8IVJ8 170 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 FER1L6-AS1Q8NA97 138 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 OR4K17Q8NGC6 315 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 RHEBL1Q8TAI7 183 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 PTH2Q96A98 100 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 SLAMF6Q96DU3 332 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 VSIG2Q96IQ7 327 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 AQP10Q96PS8 301 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 ATP5SQ99766 215 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 ARHGDIGQ99819 225 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 GINS3Q9BRX5 216 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 RSG1Q9BU20 258 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 LINC00470Q9BZP3 86 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 OR11A1Q9GZK7 315 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 GFRA4Q9GZZ7 299 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 TXNIPQ9H3M7 391 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 BANF2Q9H503 90 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 POPDC3Q9HBV1 291 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 CYTL1Q9NRR1 136 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 MRPL16Q9NX20 251 aaKnown RBP3□□□□□ -1.93
HMGB3-203ENST00000430118 MED29Q9NX70 200 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF586Q9NXT0 402 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 CLCF1Q9UBD9 225 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 HHLA2Q9UM44 414 aa3□□□□□ -1.93
HMGB3-203ENST00000430118 DSCAMO60469 2012 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 IGLC7A0M8Q6 106 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 TMEM189A5PLL7 270 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 SRRM5B3KS81 715 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 C9JQL5 133 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 FTCDNL1E5RQL4 147 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 J3QR89 54 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 AGPAT2O15120 278 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 TRAF3IP2O43734 574 aaPredicted RBP2.99□□□□□ -1.93
HMGB3-203ENST00000430118 GNG7O60262 68 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 OR1I1O60431 355 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 HBZP02008 142 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 HSPB1P04792 205 aaKnown RBP2.99□□□□□ -1.93
HMGB3-203ENST00000430118 CTSDP07339 412 aaPredicted RBP2.99□□□□□ -1.93
HMGB3-203ENST00000430118 PET100P0DJ07 73 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 MPC1LP0DKB6 136 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 IGLC2P0DOY2 106 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 IGLC3P0DOY3 106 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 PSG2P11465 335 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 PPIBP23284 216 aaKnown RBP2.99□□□□□ -1.93
HMGB3-203ENST00000430118 OMGP23515 440 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 ATP6V0CP27449 155 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 KDELR2P33947 212 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 LPAR6P43657 344 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 NPBWR2P48146 333 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 GNG4P50150 75 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 TAS2R43P59537 309 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 LTC4SQ16873 150 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 ARHGAP11BQ3KRB8 267 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 CCSMST1Q4G0I0 132 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 PDZD11Q5EBL8 140 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 SOHLH1Q5JUK2 328 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 AADACL3Q5VUY0 350 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 MRPL54Q6P161 138 aaKnown RBP2.99□□□□□ -1.93
HMGB3-203ENST00000430118 FOXI2Q6ZQN5 318 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 GTF2H5Q6ZYL4 71 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 BOD1L2Q8IYS8 172 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 CA13Q8N1Q1 262 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 C8orf31Q8N9H6 132 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 OR5A1Q8NGJ0 315 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 OR9G4Q8NGQ1 327 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 OR4X1Q8NH49 305 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 NT5CQ8TCD5 201 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 C10orf105Q8TEF2 133 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 APH1AQ96BI3 265 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 GALMQ96C23 342 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 PPCDCQ96CD2 204 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 STARD4Q96DR4 205 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 SLC25A38Q96DW6 304 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 SLC35G5Q96KT7 338 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 GPR82Q96P67 336 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 TSSK6Q9BXA6 273 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 NMES1Q9C002 83 aa2.99□□□□□ -1.93
HMGB3-203ENST00000430118 TAF9BQ9HBM6 251 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms