RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 PRSS54Q6PEW0 395 aa12.79□□□□□ -0.36
UBE3D-204ENST00000430071 CACNG8Q8WXS5 425 aa12.79□□□□□ -0.36
UBE3D-204ENST00000430071 ZNF414Q96IQ9 312 aa12.79□□□□□ -0.36
UBE3D-204ENST00000430071 IGHV3-35A0A0C4DH35 117 aa12.78□□□□□ -0.36
UBE3D-204ENST00000430071 RPS10-NUDT3A0A1W2PQS6 291 aa12.78□□□□□ -0.36
UBE3D-204ENST00000430071 ZNF785A8K8V0 405 aa12.78□□□□□ -0.36
UBE3D-204ENST00000430071 TSC22D2O75157 780 aa12.78□□□□□ -0.36
UBE3D-204ENST00000430071 CCNKO75909 580 aa12.78□□□□□ -0.36
UBE3D-204ENST00000430071 RRAS2P62070 204 aaPredicted RBP12.78□□□□□ -0.36
UBE3D-204ENST00000430071 CYCSP99999 105 aaKnown RBP12.78□□□□□ -0.36
UBE3D-204ENST00000430071 CD300EQ496F6 205 aaPredicted RBP12.78□□□□□ -0.36
UBE3D-204ENST00000430071 LRRC37A5PQ49AS3 106 aa12.78□□□□□ -0.36
UBE3D-204ENST00000430071 SPSB3Q6PJ21 355 aa12.78□□□□□ -0.36
UBE3D-204ENST00000430071 TMEM14EPQ6UXP3 125 aa12.78□□□□□ -0.36
UBE3D-204ENST00000430071 SLC16A13Q7RTY0 426 aa12.78□□□□□ -0.36
UBE3D-204ENST00000430071 OR4X1Q8NH49 305 aa12.78□□□□□ -0.36
UBE3D-204ENST00000430071 SIGLEC8Q9NYZ4 499 aa12.78□□□□□ -0.36
UBE3D-204ENST00000430071 C2orf70A6NJV1 201 aa12.77□□□□□ -0.37
UBE3D-204ENST00000430071 PMS2P5A8MQ11 134 aa12.77□□□□□ -0.37
UBE3D-204ENST00000430071 H0YIZ8 118 aa12.77□□□□□ -0.37
UBE3D-204ENST00000430071 L7N2F9 121 aa12.77□□□□□ -0.37
UBE3D-204ENST00000430071 DEDDO75618 318 aa12.77□□□□□ -0.37
UBE3D-204ENST00000430071 METTL15P1P0C7V9 234 aa12.77□□□□□ -0.37
UBE3D-204ENST00000430071 SLC25A4P12235 298 aa12.77□□□□□ -0.37
UBE3D-204ENST00000430071 NPBWR1P48145 328 aa12.77□□□□□ -0.37
UBE3D-204ENST00000430071 RND2P52198 227 aa12.77□□□□□ -0.37
UBE3D-204ENST00000430071 VAMP2P63027 116 aa12.77□□□□□ -0.37
UBE3D-204ENST00000430071 PPP1R1CQ8WVI7 109 aa12.77□□□□□ -0.37
UBE3D-204ENST00000430071 GNG7O60262 68 aa12.76□□□□□ -0.37
UBE3D-204ENST00000430071 CLN5O75503 358 aa12.76□□□□□ -0.37
UBE3D-204ENST00000430071 GPX4P36969 197 aaPredicted RBP12.76□□□□□ -0.37
UBE3D-204ENST00000430071 ETFRF1Q6IPR1 90 aa12.76□□□□□ -0.37
UBE3D-204ENST00000430071 GPHB5Q86YW7 130 aa12.76□□□□□ -0.37
UBE3D-204ENST00000430071 TMEM116Q8NCL8 245 aa12.76□□□□□ -0.37
UBE3D-204ENST00000430071 ACY3Q96HD9 319 aa12.76□□□□□ -0.37
UBE3D-204ENST00000430071 TM2D3Q9BRN9 247 aa12.76□□□□□ -0.37
UBE3D-204ENST00000430071 WFDC10AQ9H1F0 79 aa12.76□□□□□ -0.37
UBE3D-204ENST00000430071 GAR1Q9NY12 217 aaKnown RBP12.76□□□□□ -0.37
UBE3D-204ENST00000430071 OR5AC2Q9NZP5 309 aa12.76□□□□□ -0.37
UBE3D-204ENST00000430071 CSMD3Q7Z407 3707 aa12.76□□□□□ -0.37
UBE3D-204ENST00000430071 TENM2Q9NT68 2774 aa12.76□□□□□ -0.37
UBE3D-204ENST00000430071 NUPL2O15504 423 aaKnown RBP12.75□□□□□ -0.37
UBE3D-204ENST00000430071 CD7P09564 240 aa12.75□□□□□ -0.37
UBE3D-204ENST00000430071 FOLR2P14207 255 aa12.75□□□□□ -0.37
UBE3D-204ENST00000430071 PVALBP20472 110 aaPredicted RBP12.75□□□□□ -0.37
UBE3D-204ENST00000430071 ARL16Q0P5N6 197 aa12.75□□□□□ -0.37
UBE3D-204ENST00000430071 GAMTQ14353 236 aa12.75□□□□□ -0.37
UBE3D-204ENST00000430071 DEFB114Q30KQ6 69 aa12.75□□□□□ -0.37
UBE3D-204ENST00000430071 OR8G2PQ6IF36 304 aa12.75□□□□□ -0.37
UBE3D-204ENST00000430071 LCN12Q6JVE5 192 aa12.75□□□□□ -0.37
UBE3D-204ENST00000430071 UNQ9165/PRO28630Q6UXU0 137 aa12.75□□□□□ -0.37
UBE3D-204ENST00000430071 NPIPB3Q92617 1050 aa12.75□□□□□ -0.37
UBE3D-204ENST00000430071 ZNF436Q9C0F3 470 aaPredicted RBP12.75□□□□□ -0.37
UBE3D-204ENST00000430071 PEMTQ9UBM1 199 aa12.75□□□□□ -0.37
UBE3D-204ENST00000430071 FAM24AA6NFZ4 105 aa12.74□□□□□ -0.37
UBE3D-204ENST00000430071 A8MZ25 164 aa12.74□□□□□ -0.37
UBE3D-204ENST00000430071 IGKV1-17P01599 117 aa12.74□□□□□ -0.37
UBE3D-204ENST00000430071 IGLC1P0CG04 106 aa12.74□□□□□ -0.37
UBE3D-204ENST00000430071 BCAP31P51572 246 aa12.74□□□□□ -0.37
UBE3D-204ENST00000430071 CAV2P51636 162 aa12.74□□□□□ -0.37
UBE3D-204ENST00000430071 ACOT7LQ6ZUV0 252 aa12.74□□□□□ -0.37
UBE3D-204ENST00000430071 RNF126Q9BV68 326 aa12.74□□□□□ -0.37
UBE3D-204ENST00000430071 IGSF23A1L1A6 192 aa12.73□□□□□ -0.37
UBE3D-204ENST00000430071 TMEM213A2RRL7 107 aa12.73□□□□□ -0.37
UBE3D-204ENST00000430071 LGALS9O00182 355 aa12.73□□□□□ -0.37
UBE3D-204ENST00000430071 MPC2O95563 127 aa12.73□□□□□ -0.37
UBE3D-204ENST00000430071 HAGHQ16775 308 aa12.73□□□□□ -0.37
UBE3D-204ENST00000430071 TIGITQ495A1 244 aa12.73□□□□□ -0.37
UBE3D-204ENST00000430071 FAM106AQ4KMX7 169 aa12.73□□□□□ -0.37
UBE3D-204ENST00000430071 TM4SF20Q53R12 229 aa12.73□□□□□ -0.37
UBE3D-204ENST00000430071 SLC35E1Q96K37 410 aa12.73□□□□□ -0.37
UBE3D-204ENST00000430071 LYRM2Q9NU23 88 aaPredicted RBP12.73□□□□□ -0.37
UBE3D-204ENST00000430071 ZNF320A2RRD8 509 aa12.72□□□□□ -0.37
UBE3D-204ENST00000430071 NDUFA4O00483 81 aa12.72□□□□□ -0.37
UBE3D-204ENST00000430071 CST7O76096 145 aa12.72□□□□□ -0.37
UBE3D-204ENST00000430071 RLN2P04090 185 aa12.72□□□□□ -0.37
UBE3D-204ENST00000430071 OR10J1P30954 320 aa12.72□□□□□ -0.37
UBE3D-204ENST00000430071 Q6ZNX1 250 aa12.72□□□□□ -0.37
UBE3D-204ENST00000430071 TMEM252Q8N6L7 170 aa12.72□□□□□ -0.37
UBE3D-204ENST00000430071 DYNLRB2Q8TF09 96 aa12.72□□□□□ -0.37
UBE3D-204ENST00000430071 TMEM190Q8WZ59 177 aa12.72□□□□□ -0.37
UBE3D-204ENST00000430071 MLXQ9UH92 298 aa12.72□□□□□ -0.37
UBE3D-204ENST00000430071 STARD9Q9P2P6 4700 aa12.72□□□□□ -0.37
UBE3D-204ENST00000430071 DYNC2H1Q8NCM8 4307 aaKnown RBP12.71□□□□□ -0.37
UBE3D-204ENST00000430071 IGKV1D-37A0A075B6S9 117 aa12.71□□□□□ -0.37
UBE3D-204ENST00000430071 IGKV1OR2-108A0A075B7D4 117 aa12.71□□□□□ -0.37
UBE3D-204ENST00000430071 IGHV3OR16-8A0A075B7F1 116 aa12.71□□□□□ -0.37
UBE3D-204ENST00000430071 TRAV14DV4A0A0A6YYC5 116 aa12.71□□□□□ -0.37
UBE3D-204ENST00000430071 E5RGE8 158 aa12.71□□□□□ -0.37
UBE3D-204ENST00000430071 GIPP09681 153 aaPredicted RBP12.71□□□□□ -0.37
UBE3D-204ENST00000430071 CBLN1P23435 193 aa12.71□□□□□ -0.37
UBE3D-204ENST00000430071 CD81P60033 236 aa12.71□□□□□ -0.37
UBE3D-204ENST00000430071 RELQ04864 619 aaPredicted RBP12.71□□□□□ -0.37
UBE3D-204ENST00000430071 DEFB125Q8N687 156 aa12.71□□□□□ -0.37
UBE3D-204ENST00000430071 OR10P1Q8NGE3 313 aa12.71□□□□□ -0.37
UBE3D-204ENST00000430071 CHAC2Q8WUX2 184 aa12.71□□□□□ -0.37
UBE3D-204ENST00000430071 ZMAT4Q9H898 229 aa12.71□□□□□ -0.37
UBE3D-204ENST00000430071 RETNQ9HD89 108 aa12.71□□□□□ -0.37
UBE3D-204ENST00000430071 TRAV30A0A087WSZ9 112 aa12.7□□□□□ -0.38
UBE3D-204ENST00000430071 A8MWP6 167 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms