RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 COPZ2Q9P299 210 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 VPS13DQ5THJ4 4388 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 A0A1W2PS18 150 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 ZNF705EA8MWA4 302 aaPredicted RBP7.27□□□□□ -1.25
GACAT3-201ENST00000426539 NXPH3O95157 252 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 RAB3DO95716 219 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 TAS2R19P59542 299 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 SPCS3P61009 180 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 SCGB2B2Q4G0G5 96 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 STEAP1BQ6NZ63 245 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 PRSS54Q6PEW0 395 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 SELENOHQ8IZQ5 122 aaKnown RBP7.27□□□□□ -1.25
GACAT3-201ENST00000426539 CCDC71LQ8N9Z2 235 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 CSNK1G2-AS1Q8NCQ2 148 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 OR52E5Q8NH55 327 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 ZFAND1Q8TCF1 268 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 GLMPQ8WWB7 406 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 TMEM230Q96A57 120 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 GPR146Q96CH1 333 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 RRNAD1Q96FB5 475 aaKnown RBP7.27□□□□□ -1.25
GACAT3-201ENST00000426539 TMEM222Q9H0R3 208 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 HRH4Q9H3N8 390 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 ENY2Q9NPA8 101 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 CLEC5AQ9NY25 188 aa7.27□□□□□ -1.25
GACAT3-201ENST00000426539 TEX13DA0A0J9YY54 714 aaPredicted RBP7.26□□□□□ -1.25
GACAT3-201ENST00000426539 IGLL5B9A064 214 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 B3GALNT1O75752 331 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 SPP1P10451 314 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 HLA-DMBP28068 263 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 HTR2BP41595 481 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 RND2P52198 227 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 TCTAP57738 103 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 MEF2DQ14814 521 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 USF2Q15853 346 aaPredicted RBP7.26□□□□□ -1.25
GACAT3-201ENST00000426539 C2orf83Q53S99 150 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 ACTL10Q5JWF8 245 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 MORN3Q6PF18 240 aaPredicted RBP7.26□□□□□ -1.25
GACAT3-201ENST00000426539 C16orf54Q6UWD8 224 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 AP3S1Q92572 193 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 RAB40CQ96S21 281 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 NAA60Q9H7X0 242 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.26□□□□□ -1.25
GACAT3-201ENST00000426539 CACNG5Q9UF02 275 aa7.26□□□□□ -1.25
GACAT3-201ENST00000426539 AGRNO00468 2067 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 TRAV30A0A087WSZ9 112 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 GABARAPH6UMI1 98 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 CTDSP2O14595 271 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 MIFP14174 115 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 OR10J1P30954 320 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 YPEL3P61236 119 aaPredicted RBP7.25□□□□□ -1.25
GACAT3-201ENST00000426539 DHODHQ02127 395 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 DHRS2Q13268 280 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 TMEM41BQ5BJD5 291 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 GPR107Q5VW38 600 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 Q6ZTC4 211 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 FAM219AQ8IW50 185 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 SLC24A4Q8NFF2 622 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 OR1S2Q8NGQ3 325 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 RNASE11Q8TAA1 199 aaKnown RBP7.25□□□□□ -1.25
GACAT3-201ENST00000426539 RBPMSQ93062 196 aaKnown RBP7.25□□□□□ -1.25
GACAT3-201ENST00000426539 CELA1Q9UNI1 258 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 GPR132Q9UNW8 380 aa7.25□□□□□ -1.25
GACAT3-201ENST00000426539 RPS10-NUDT3A0A1W2PQS6 291 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 CRYM-AS1A6NIL9 109 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 C11orf94C9JXX5 98 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 HNRNPCP07910 306 aaKnown RBP eCLIP7.24□□□□□ -1.25
GACAT3-201ENST00000426539 SLC25A4P12235 298 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 SURF2Q15527 256 aaPredicted RBP7.24□□□□□ -1.25
GACAT3-201ENST00000426539 PSMG4Q5JS54 123 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 TMEM268Q5VZI3 342 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 OR4C16Q8NGL9 310 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 RNASEH2CQ8TDP1 164 aaKnown RBP7.24□□□□□ -1.25
GACAT3-201ENST00000426539 Q8WTZ3 238 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 C15orf40Q8WUR7 153 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 NPIPB3Q92617 1050 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 NARS2Q96I59 477 aaKnown RBP7.24□□□□□ -1.25
GACAT3-201ENST00000426539 HEYLQ9NQ87 328 aaPredicted RBP7.24□□□□□ -1.25
GACAT3-201ENST00000426539 PRR13Q9NZ81 148 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 TBC1D24Q9ULP9 559 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 C14orf166Q9Y224 244 aaKnown RBP7.24□□□□□ -1.25
GACAT3-201ENST00000426539 TMEM56-RWDD3S4R434 201 aa7.24□□□□□ -1.25
GACAT3-201ENST00000426539 IGHV4-4A0A075B6R2 117 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 TRAV10A0A0B4J240 114 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 HELTA6NFD8 242 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 CEBPZOSA8MTT3 80 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 FAM90A26D6RGX4 464 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 BUB3O43684 328 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 SCGB2A1O75556 95 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 IL4P05112 153 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 ID3Q02535 119 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 SSBP1Q04837 148 aaKnown RBP7.23□□□□□ -1.25
GACAT3-201ENST00000426539 SPCS2Q15005 226 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 C12orf74Q32Q52 190 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 NMSQ5H8A3 153 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 ZNF767PQ75MW2 155 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 SMIM4Q8WVI0 70 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 SCRT1Q9BWW7 348 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 DNAH6Q9C0G6 4158 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 KIAA1109Q2LD37 5005 aa7.23□□□□□ -1.25
GACAT3-201ENST00000426539 DISC1C4P0D8 188 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms