RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 RNF151Q2KHN1 245 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 OR5R1Q8NH85 324 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 NRN1Q9NPD7 142 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 RNF24Q9Y225 148 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 SLC25A15Q9Y619 301 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 TRGV8A0A0C4DH27 118 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 SERTM2A0A1B0GWG4 89 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 ISLRO14498 428 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 TMEM183BQ1AE95 376 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 C17orf58Q2M2W7 97 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 KLF17Q5JT82 389 aaPredicted RBP10.88□□□□□ -0.67
USP42-203ENST00000426246 LINC00305Q7Z4B0 112 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 RAXQ9Y2V3 346 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 RNF114Q9Y508 228 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 NDUFB3O43676 98 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 YPEL1O60688 119 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 HNRNPA3P51991 378 aaKnown RBP10.88□□□□□ -0.67
USP42-203ENST00000426246 GFRALQ6UXV0 394 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 RITA1Q96K30 269 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 YPEL2Q96QA6 119 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 FBXL7Q9UJT9 491 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 BSPH1Q075Z2 132 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 LURAP1LQ8IV03 231 aa10.88□□□□□ -0.67
USP42-203ENST00000426246 BRS3P32247 399 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 PRR30Q53SZ7 412 aaPredicted RBP10.87□□□□□ -0.67
USP42-203ENST00000426246 FAM222BQ8WU58 562 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 NOL4LQ96MY1 436 aaPredicted RBP10.87□□□□□ -0.67
USP42-203ENST00000426246 DNAJC4Q9NNZ3 241 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 PRNDQ9UKY0 176 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 PRRG2O14669 202 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 FAM87AP0C7U9 286 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 C8orf88P0DMB2 117 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 CD40P25942 277 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 GLRXP35754 106 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 PRNTQ86SH4 94 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 MUC15Q8N387 334 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 CORO2AQ92828 525 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 ZNF714Q96N38 554 aa10.87□□□□□ -0.67
USP42-203ENST00000426246 LOC389332A0A1B0GUA5 103 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 MPDU1O75352 247 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 TMEM108Q6UXF1 575 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 OR1L4Q8NGR5 311 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 ONECUT1Q9UBC0 465 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 NPSP0C0P6 89 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 TMPRSS3P57727 454 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 C11orf42Q8N5U0 333 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 OR1L8Q8NGR8 309 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 LINC01560Q8TB33 94 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 SLC25A33Q9BSK2 321 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 MRPL36Q9P0J6 103 aaKnown RBP10.86□□□□□ -0.67
USP42-203ENST00000426246 FOSL1P15407 271 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 AREGP15514 252 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 LCN2P80188 198 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 ZNF124Q15973 351 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 WFDC3Q8IUB2 231 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 TMEM167BQ9NRX6 74 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 SONP18583 2426 aaKnown RBP10.86□□□□□ -0.67
USP42-203ENST00000426246 MYO18BQ8IUG5 2567 aa10.86□□□□□ -0.67
USP42-203ENST00000426246 HIGD1CA8MV81 97 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 SSX8Q7RTT4 187 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 PDPNQ86YL7 162 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 OR52E5Q8NH55 327 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 FBXL15Q9H469 300 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 TNFRSF19Q9NS68 423 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 DLL1O00548 723 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 RPL15P61313 204 aaKnown RBP10.85□□□□□ -0.67
USP42-203ENST00000426246 SLAQ13239 276 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 FAM169BQ8N8A8 192 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 OR8B2Q96RD0 313 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 DIRC2Q96SL1 478 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 ZNF430Q9H8G1 570 aaPredicted RBP10.85□□□□□ -0.67
USP42-203ENST00000426246 DSCAML1Q8TD84 2053 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 WNK1Q9H4A3 2382 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 PPIAL4EA0A075B759 164 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 PPIAL4DF5H284 164 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 PPIAL4FP0DN26 164 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 Q8N7P7 452 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 SFXN3Q9BWM7 321 aa10.85□□□□□ -0.67
USP42-203ENST00000426246 USP9XQ93008 2570 aaPredicted RBP10.84□□□□□ -0.67
USP42-203ENST00000426246 UPK2O00526 184 aa10.84□□□□□ -0.67
USP42-203ENST00000426246 CHEK1O14757 476 aa10.84□□□□□ -0.67
USP42-203ENST00000426246 LRRC10Q5BKY1 277 aa10.84□□□□□ -0.67
USP42-203ENST00000426246 EXOC3-AS1Q8N2X6 119 aa10.84□□□□□ -0.67
USP42-203ENST00000426246 C22orf15Q8WYQ4 148 aa10.84□□□□□ -0.67
USP42-203ENST00000426246 TNFRSF1AP19438 455 aa10.84□□□□□ -0.67
USP42-203ENST00000426246 IGFL4Q6B9Z1 124 aa10.84□□□□□ -0.67
USP42-203ENST00000426246 GAFA1Q96PS6 74 aa10.84□□□□□ -0.67
USP42-203ENST00000426246 RNF2Q99496 336 aa10.84□□□□□ -0.67
USP42-203ENST00000426246 J3KRW8 73 aa10.84□□□□□ -0.67
USP42-203ENST00000426246 P0C879 139 aa10.84□□□□□ -0.67
USP42-203ENST00000426246 CCDC168Q8NDH2 2452 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 A0A0G2JNJ9 132 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 NCBP2LA6PVI3 153 aaKnown RBP10.83□□□□□ -0.68
USP42-203ENST00000426246 C16orf97H3BN30 126 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 RPLP1P05386 114 aaKnown RBP10.83□□□□□ -0.68
USP42-203ENST00000426246 NUTF2P61970 127 aaKnown RBP10.83□□□□□ -0.68
USP42-203ENST00000426246 TMEM177Q53S58 311 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 FNDC4Q9H6D8 234 aaPredicted RBP10.83□□□□□ -0.68
USP42-203ENST00000426246 LPAR2Q9HBW0 351 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 Q9UFV3 132 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms