RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 HTR2BP41595 481 aa11.31□□□□□ -0.6
USB1-202ENST00000423271 DTD1Q8TEA8 209 aa11.31□□□□□ -0.6
USB1-202ENST00000423271 PINX1Q96BK5 328 aaKnown RBP11.31□□□□□ -0.6
USB1-202ENST00000423271 LOC102724200A0A096LPH7 203 aaPredicted RBP11.3□□□□□ -0.6
USB1-202ENST00000423271 LCE6AA0A183 80 aa11.3□□□□□ -0.6
USB1-202ENST00000423271 INMT-MINDY4F8WBC2 141 aa11.3□□□□□ -0.6
USB1-202ENST00000423271 CCSO14618 274 aa11.3□□□□□ -0.6
USB1-202ENST00000423271 SUB1P53999 127 aaKnown RBP eCLIP11.3□□□□□ -0.6
USB1-202ENST00000423271 MFAP4P55083 255 aa11.3□□□□□ -0.6
USB1-202ENST00000423271 ODF3L2Q3SX64 289 aa11.3□□□□□ -0.6
USB1-202ENST00000423271 PVRIGQ6DKI7 326 aa11.3□□□□□ -0.6
USB1-202ENST00000423271 C12orf45Q8N5I9 185 aaPredicted RBP11.3□□□□□ -0.6
USB1-202ENST00000423271 SLC24A4Q8NFF2 622 aa11.3□□□□□ -0.6
USB1-202ENST00000423271 TMEM170AQ8WVE7 144 aa11.3□□□□□ -0.6
USB1-202ENST00000423271 OR10C1Q96KK4 312 aa11.3□□□□□ -0.6
USB1-202ENST00000423271 IGHV3-49A0A0A0MS15 119 aa11.29□□□□□ -0.6
USB1-202ENST00000423271 C15orf62A8K5M9 175 aa11.29□□□□□ -0.6
USB1-202ENST00000423271 FAM90A26D6RGX4 464 aa11.29□□□□□ -0.6
USB1-202ENST00000423271 K7EMT4 169 aa11.29□□□□□ -0.6
USB1-202ENST00000423271 NUPL2O15504 423 aaKnown RBP11.29□□□□□ -0.6
USB1-202ENST00000423271 FCGR2BP31994 310 aaPredicted RBP11.29□□□□□ -0.6
USB1-202ENST00000423271 RELQ04864 619 aaPredicted RBP11.29□□□□□ -0.6
USB1-202ENST00000423271 MARVELD1Q9BSK0 173 aa11.29□□□□□ -0.6
USB1-202ENST00000423271 MAGT1Q9H0U3 335 aa11.29□□□□□ -0.6
USB1-202ENST00000423271 IGHV7-4-1A0A0J9YVY3 117 aa11.28□□□□□ -0.6
USB1-202ENST00000423271 CORTO00230 105 aa11.28□□□□□ -0.6
USB1-202ENST00000423271 YIF1AO95070 293 aa11.28□□□□□ -0.6
USB1-202ENST00000423271 IAPPP10997 89 aa11.28□□□□□ -0.6
USB1-202ENST00000423271 NPY1RP25929 384 aa11.28□□□□□ -0.6
USB1-202ENST00000423271 IAH1Q2TAA2 248 aaPredicted RBP11.28□□□□□ -0.6
USB1-202ENST00000423271 C2orf83Q53S99 150 aa11.28□□□□□ -0.6
USB1-202ENST00000423271 LAMTOR1Q6IAA8 161 aa11.28□□□□□ -0.6
USB1-202ENST00000423271 ZBTB8BQ8NAP8 495 aaPredicted RBP11.28□□□□□ -0.6
USB1-202ENST00000423271 OR4D5Q8NGN0 318 aa11.28□□□□□ -0.6
USB1-202ENST00000423271 RNF2Q99496 336 aa11.28□□□□□ -0.6
USB1-202ENST00000423271 TXN2Q99757 166 aa11.28□□□□□ -0.6
USB1-202ENST00000423271 OVOL2Q9BRP0 275 aa11.28□□□□□ -0.6
USB1-202ENST00000423271 GPN1Q9HCN4 374 aaPredicted RBP11.28□□□□□ -0.6
USB1-202ENST00000423271 SMPXQ9UHP9 88 aa11.28□□□□□ -0.6
USB1-202ENST00000423271 IGHV3OR16-13A0A075B7E8 117 aa11.27□□□□□ -0.61
USB1-202ENST00000423271 IGHV3-74A0A0B4J1X5 117 aa11.27□□□□□ -0.61
USB1-202ENST00000423271 CHEK1O14757 476 aa11.27□□□□□ -0.61
USB1-202ENST00000423271 SYNGR2O43760 224 aa11.27□□□□□ -0.61
USB1-202ENST00000423271 GNG7O60262 68 aa11.27□□□□□ -0.61
USB1-202ENST00000423271 PRAF2O60831 178 aa11.27□□□□□ -0.61
USB1-202ENST00000423271 MED6O75586 246 aa11.27□□□□□ -0.61
USB1-202ENST00000423271 IFNA10P01566 189 aa11.27□□□□□ -0.61
USB1-202ENST00000423271 MLANAQ16655 118 aa11.27□□□□□ -0.61
USB1-202ENST00000423271 TMEM116Q8NCL8 245 aa11.27□□□□□ -0.61
USB1-202ENST00000423271 RHPN1-AS1Q9BWJ2 59 aa11.27□□□□□ -0.61
USB1-202ENST00000423271 FNDC4Q9H6D8 234 aaPredicted RBP11.27□□□□□ -0.61
USB1-202ENST00000423271 BIRC6Q9NR09 4857 aa11.26□□□□□ -0.61
USB1-202ENST00000423271 OR4C46A6NHA9 309 aa11.26□□□□□ -0.61
USB1-202ENST00000423271 FAM25EA8MYX2 175 aa11.26□□□□□ -0.61
USB1-202ENST00000423271 WRBO00258 174 aa11.26□□□□□ -0.61
USB1-202ENST00000423271 SCGB1D2O95969 90 aa11.26□□□□□ -0.61
USB1-202ENST00000423271 PTTG1O95997 202 aa11.26□□□□□ -0.61
USB1-202ENST00000423271 OPRK1P41145 380 aa11.26□□□□□ -0.61
USB1-202ENST00000423271 NKX2-1P43699 371 aaPredicted RBP11.26□□□□□ -0.61
USB1-202ENST00000423271 POLR2GP62487 172 aaKnown RBP eCLIP11.26□□□□□ -0.61
USB1-202ENST00000423271 ID3Q02535 119 aa11.26□□□□□ -0.61
USB1-202ENST00000423271 MRPL36Q9P0J6 103 aaKnown RBP11.26□□□□□ -0.61
USB1-202ENST00000423271 GSKIPQ9P0R6 139 aa11.26□□□□□ -0.61
USB1-202ENST00000423271 U3KQ87 197 aa11.26□□□□□ -0.61
USB1-202ENST00000423271 IGKV3-7A0A075B6H7 116 aa11.25□□□□□ -0.61
USB1-202ENST00000423271 C5orf51A6NDU8 294 aa11.25□□□□□ -0.61
USB1-202ENST00000423271 SNRPGP15A8MWD9 76 aa11.25□□□□□ -0.61
USB1-202ENST00000423271 TFPI2P48307 235 aa11.25□□□□□ -0.61
USB1-202ENST00000423271 ZNF124Q15973 351 aa11.25□□□□□ -0.61
USB1-202ENST00000423271 TOMM20LQ6UXN7 152 aa11.25□□□□□ -0.61
USB1-202ENST00000423271 NOXA1Q86UR1 476 aa11.25□□□□□ -0.61
USB1-202ENST00000423271 RNASEH2CQ8TDP1 164 aaKnown RBP11.25□□□□□ -0.61
USB1-202ENST00000423271 CIB3Q96Q77 187 aaPredicted RBP11.25□□□□□ -0.61
USB1-202ENST00000423271 TRAV14DV4A0A0A6YYC5 116 aa11.24□□□□□ -0.61
USB1-202ENST00000423271 RPL35AP18077 110 aaKnown RBP11.24□□□□□ -0.61
USB1-202ENST00000423271 NPBWR1P48145 328 aa11.24□□□□□ -0.61
USB1-202ENST00000423271 DEFB135Q30KP9 77 aa11.24□□□□□ -0.61
USB1-202ENST00000423271 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
USB1-202ENST00000423271 IL17DQ8TAD2 202 aa11.24□□□□□ -0.61
USB1-202ENST00000423271 ZFAND3Q9H8U3 227 aa11.24□□□□□ -0.61
USB1-202ENST00000423271 PAIP2BQ9ULR5 123 aaKnown RBP11.24□□□□□ -0.61
USB1-202ENST00000423271 RPS10-NUDT3A0A1W2PQS6 291 aa11.23□□□□□ -0.61
USB1-202ENST00000423271 H3BP45 60 aa11.23□□□□□ -0.61
USB1-202ENST00000423271 SSSCA1O60232 199 aa11.23□□□□□ -0.61
USB1-202ENST00000423271 MBPP02686 304 aaPredicted RBP11.23□□□□□ -0.61
USB1-202ENST00000423271 APOHP02749 345 aaPredicted RBP11.23□□□□□ -0.61
USB1-202ENST00000423271 IFNA4P05014 189 aa11.23□□□□□ -0.61
USB1-202ENST00000423271 APOC4P55056 127 aa11.23□□□□□ -0.61
USB1-202ENST00000423271 FAM90A2PQ658T7 463 aa11.23□□□□□ -0.61
USB1-202ENST00000423271 ZNF600Q6ZNG1 722 aa11.23□□□□□ -0.61
USB1-202ENST00000423271 LILRB2Q8N423 598 aa11.23□□□□□ -0.61
USB1-202ENST00000423271 GBGT1Q8N5D6 347 aa11.23□□□□□ -0.61
USB1-202ENST00000423271 ST8SIA2Q92186 375 aa11.23□□□□□ -0.61
USB1-202ENST00000423271 C2orf50Q96LR7 162 aa11.23□□□□□ -0.61
USB1-202ENST00000423271 RCL1Q9Y2P8 373 aaKnown RBP11.23□□□□□ -0.61
USB1-202ENST00000423271 PUS1Q9Y606 427 aaKnown RBP eCLIP11.23□□□□□ -0.61
USB1-202ENST00000423271 IGHV3-66A0A0C4DH42 116 aa11.22□□□□□ -0.61
USB1-202ENST00000423271 GOSR2O14653 212 aa11.22□□□□□ -0.61
USB1-202ENST00000423271 TMEM50AO95807 157 aa11.22□□□□□ -0.61
USB1-202ENST00000423271 ATP5IP56385 69 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms