RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 A0A1B0GW15 77 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 HIGD1CA8MV81 97 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 HSBP1L1C9JCN9 74 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 M0R296 226 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 CDX4O14627 284 aaPredicted RBP8.91□□□□□ -0.98
LIMS1-207ENST00000422797 MYOD1P15172 320 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 GATA2P23769 480 aaPredicted RBP8.91□□□□□ -0.98
LIMS1-207ENST00000422797 LGALS7P47929 136 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 CCL11P51671 97 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 ZNF137PP52743 207 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 UBE2V1Q13404 147 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 ASCL5Q7RTU5 278 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 MOB3BQ86TA1 216 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 FDCSPQ8NFU4 85 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 TMEM191AQ9H0A3 160 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 RNF24Q9Y225 148 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 ZNF318Q5VUA4 2279 aa8.91□□□□□ -0.98
LIMS1-207ENST00000422797 C2orf70A6NJV1 201 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 K7EP13 123 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 TCF21O43680 179 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 NDUFB8O95169 186 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 P01737 135 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 HLA-DRB1P01911 266 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 SLC25A5P05141 298 aaKnown RBP8.9□□□□□ -0.98
LIMS1-207ENST00000422797 LIPFP07098 398 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 CRYGCP07315 174 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 PTTG1IPP53801 180 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 PLP1P60201 277 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 PET117Q6UWS5 81 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 RBPMS2Q6ZRY4 209 aaKnown RBP8.9□□□□□ -0.98
LIMS1-207ENST00000422797 FAM19A2Q8N3H0 131 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 OR2T6Q8NHC8 308 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 NPIPB3Q92617 1050 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 DAZAP1Q96EP5 407 aaKnown RBP8.9□□□□□ -0.98
LIMS1-207ENST00000422797 CCL13Q99616 98 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 PMCHL2Q9BQD1 86 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 MLST8Q9BVC4 326 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 PRSS22Q9GZN4 317 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 WNT10AQ9GZT5 417 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 MS4A6AQ9H2W1 248 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 ASCL3Q9NQ33 180 aa8.9□□□□□ -0.98
LIMS1-207ENST00000422797 TRAV5A0A0B4J249 113 aa8.9□□□□□ -0.99
LIMS1-207ENST00000422797 IGLC7A0M8Q6 106 aa8.9□□□□□ -0.99
LIMS1-207ENST00000422797 FSTL3O95633 263 aa8.9□□□□□ -0.99
LIMS1-207ENST00000422797 LTAP01374 205 aa8.9□□□□□ -0.99
LIMS1-207ENST00000422797 TFPI2P48307 235 aa8.9□□□□□ -0.99
LIMS1-207ENST00000422797 EBLN2Q6P2I7 272 aa8.9□□□□□ -0.99
LIMS1-207ENST00000422797 PATE2Q6UY27 113 aa8.9□□□□□ -0.99
LIMS1-207ENST00000422797 LINC00305Q7Z4B0 112 aa8.9□□□□□ -0.99
LIMS1-207ENST00000422797 FAM216BQ8N7L0 139 aa8.9□□□□□ -0.99
LIMS1-207ENST00000422797 OR10W1Q8NGF6 305 aa8.9□□□□□ -0.99
LIMS1-207ENST00000422797 NDFIP1Q9BT67 221 aa8.9□□□□□ -0.99
LIMS1-207ENST00000422797 SSBP3Q9BWW4 388 aaPredicted RBP8.9□□□□□ -0.99
LIMS1-207ENST00000422797 HSPB8Q9UJY1 196 aa8.9□□□□□ -0.99
LIMS1-207ENST00000422797 IGKV1D-37A0A075B6S9 117 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 C19orf71A6NCJ1 209 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 CA1P00915 261 aaPredicted RBP8.89□□□□□ -0.99
LIMS1-207ENST00000422797 PYYP10082 97 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 Q56UQ5 140 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 LRRC10Q5BKY1 277 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 C1orf185Q5T7R7 199 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 GDF5OSQ5U4N7 250 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 C12orf54Q6X4T0 127 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 ZADH2Q8N4Q0 377 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 TEX45Q8NA69 505 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 FAM168AQ92567 244 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 TNFRSF14Q92956 283 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 OTORQ9NRC9 128 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 TMEM14CQ9P0S9 112 aa8.89□□□□□ -0.99
LIMS1-207ENST00000422797 NPIPB6E9PJ23 425 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 CEACAM4O75871 244 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 NBEAP1P0C6P0 100 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 WT1-ASQ06250 92 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 SPRNQ5BIV9 151 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 UTF1Q5T230 341 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 MORN5Q5VZ52 161 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 Q6AWC8 147 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 PRR27Q6MZM9 219 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 VHLLQ6RSH7 139 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 ZNF474Q6S9Z5 364 aaPredicted RBP8.88□□□□□ -0.99
LIMS1-207ENST00000422797 IGF2-ASQ6U949 168 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 S100A7AQ86SG5 101 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 TMEM116Q8NCL8 245 aa8.88□□□□□ -0.99
LIMS1-207ENST00000422797 FNDC4Q9H6D8 234 aaPredicted RBP8.88□□□□□ -0.99
LIMS1-207ENST00000422797 DIDO1Q9BTC0 2240 aaKnown RBP8.88□□□□□ -0.99
LIMS1-207ENST00000422797 DOCK7Q96N67 2140 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 LAMA1P25391 3075 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 TRAV30A0A087WSZ9 112 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 IGHV2-70DA0A0C4DH43 119 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 PGPA6NDG6 321 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 OR4C46A6NHA9 309 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 VSTM5A8MXK1 200 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 SYS1-DBNDD2H3BUS1 97 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 CHEK1O14757 476 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 LEPROTL1O95214 131 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 IGLL1P15814 213 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 HINT1P49773 126 aaPredicted RBP8.87□□□□□ -0.99
LIMS1-207ENST00000422797 CAMPP49913 170 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 SLC25A34Q6PIV7 304 aa8.87□□□□□ -0.99
LIMS1-207ENST00000422797 SEM1Q6ZVN7 128 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms