RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 CTDSP2O14595 271 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 IFNA4P05014 189 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 SPP1P10451 314 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 OR10J1P30954 320 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 ALDH3B2P48448 385 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 RND2P52198 227 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 NANOS2P60321 138 aaKnown RBP8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 YPEL3P61236 119 aaPredicted RBP8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 SPCS2Q15005 226 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 LGALS9CQ6DKI2 356 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 ETFRF1Q6IPR1 90 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 PRSS54Q6PEW0 395 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 MORN3Q6PF18 240 aaPredicted RBP8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 TRPT1Q86TN4 253 aaKnown RBP8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 NOXA1Q86UR1 476 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 OR4C16Q8NGL9 310 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 IL22RA2Q969J5 263 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 FBXL17Q9UF56 701 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 GPR132Q9UNW8 380 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 TMEM56-RWDD3S4R434 201 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 HNRNPCP07910 306 aaKnown RBP eCLIP8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 ZNF688P0C7X2 276 aa8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 NPY1RP25929 384 aa8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 TCTAP57738 103 aa8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 IL18Q14116 193 aa8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 MLANAQ16655 118 aa8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 DCANP1Q8TF63 244 aa8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 Q8WTZ3 238 aa8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 RAB2BQ8WUD1 216 aa8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 GPR146Q96CH1 333 aa8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 DIRAS2Q96HU8 199 aa8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 BCL7BQ9BQE9 202 aa8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 U3KQE9 123 aa8.43□□□□□ -1.06
SQSTM1-203ENST00000422245 GSTZ1O43708 216 aaPredicted RBP8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 SULT1A3P0DMM9 295 aa8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 SULT1A4P0DMN0 295 aa8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 AP2S1P53680 142 aaPredicted RBP8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 NMSQ5H8A3 153 aa8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 CLVS1Q8IUQ0 354 aaPredicted RBP8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 Q8NAQ8 132 aa8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 OR51S1Q8NGJ8 323 aa8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 GLMPQ8WWB7 406 aa8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 SCGB3A2Q96PL1 93 aa8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 HRH4Q9H3N8 390 aa8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 RSL24D1Q9UHA3 163 aaKnown RBP8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 SCP2D1Q9UJQ7 156 aa8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 KCNIP3Q9Y2W7 256 aa8.42□□□□□ -1.06
SQSTM1-203ENST00000422245 ANKRD20A5PA0PJZ0 165 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 C11orf94C9JXX5 98 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 DEFB4AO15263 64 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 IL4P05112 153 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 GIG44P09565 113 aaPredicted RBP8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 MIFP14174 115 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 C4BPBP20851 252 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 NUP62P37198 522 aaPredicted RBP8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 CCR6P51684 374 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 SNRPD3P62318 126 aaKnown RBP8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 SRPXP78539 464 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 DHRS2Q13268 280 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 ACTL10Q5JWF8 245 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 C16orf54Q6UWD8 224 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 RPP25LQ8N5L8 163 aaKnown RBP8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 DYNC2LI1Q8TCX1 351 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 C2CD4CQ8TF44 421 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 TMEM170AQ8WVE7 144 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 ACY3Q96HD9 319 aa8.41□□□□□ -1.06
SQSTM1-203ENST00000422245 A0A0B4J2A0 478 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 PIGBOS1A0A0B4J2F0 54 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 IGHV4-28A0A0C4DH34 117 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 KNCNA6PVL3 124 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 ZNF705EA8MWA4 302 aaPredicted RBP8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 NOL3O60936 208 aaKnown RBP8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 TOMM40O96008 361 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 IFNA10P01566 189 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 RD3LP0DJH9 198 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 ANXA3P12429 323 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 TMBIM6P55061 237 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 SMCO1Q147U7 214 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 USF2Q15853 346 aaPredicted RBP8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 PSMG4Q5JS54 123 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 DTD1Q8TEA8 209 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 NPIPB3Q92617 1050 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 SEPSECSQ9HD40 501 aaKnown RBP8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 NRN1Q9NPD7 142 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 HSPB7Q9UBY9 170 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 SHPKQ9UHJ6 478 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 U3KQ87 197 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 AGRNO00468 2067 aa8.4□□□□□ -1.06
SQSTM1-203ENST00000422245 FAM90A26D6RGX4 464 aa8.39□□□□□ -1.07
SQSTM1-203ENST00000422245 DEDDO75618 318 aa8.39□□□□□ -1.07
SQSTM1-203ENST00000422245 NXPH3O95157 252 aa8.39□□□□□ -1.07
SQSTM1-203ENST00000422245 ATP5IP56385 69 aaPredicted RBP8.39□□□□□ -1.07
SQSTM1-203ENST00000422245 LGI3Q8N145 548 aa8.39□□□□□ -1.07
SQSTM1-203ENST00000422245 CENPSQ8N2Z9 138 aa8.39□□□□□ -1.07
SQSTM1-203ENST00000422245 MCUBQ9NWR8 336 aa8.39□□□□□ -1.07
SQSTM1-203ENST00000422245 PFDN2Q9UHV9 154 aa8.39□□□□□ -1.07
SQSTM1-203ENST00000422245 TBC1D24Q9ULP9 559 aa8.39□□□□□ -1.07
SQSTM1-203ENST00000422245 KMT2AQ03164 3969 aa8.38□□□□□ -1.07
SQSTM1-203ENST00000422245 BUB3O43684 328 aa8.38□□□□□ -1.07
SQSTM1-203ENST00000422245 RBMY1A1P0DJD3 496 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms