RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 TMEM250H0YL14 139 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 XRCC2O43543 280 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 ANGPTL7O43827 346 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 NTN1O95631 604 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 CYB5AP00167 134 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 MT-ND6P03923 174 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 CATP04040 527 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 OR9G9P0C7N8 305 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 HIST1H1EP10412 219 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 MMP9P14780 707 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF17P17021 662 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF43P17038 809 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 AADACP22760 399 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 CDK2P24941 298 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 GRPRP30550 384 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 SLC6A6P31641 620 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 ADRA1AP35348 466 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 PGGT1BP53609 377 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 B3GALT5-AS1P59052 145 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 RND3P61587 244 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 SLC35B1P78383 322 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 EGFEM1PQ0D2K5 195 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 PSG7Q13046 419 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 CDK5R1Q15078 307 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 OR1Q1Q15612 314 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 OR8B8Q15620 311 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 MSMO1Q15800 293 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 LRRC75BQ2VPJ9 315 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 OR10J3Q5JRS4 329 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 FAM162BQ5T6X4 162 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 CPTPQ5TA50 214 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 MFSD12Q6NUT3 480 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 Q6ZT83 130 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 HAPLN4Q86UW8 402 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 TMEM86BQ8N661 226 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF615Q8N8J6 731 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 OR2K2Q8NGT1 345 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 OR2G3Q8NGZ4 309 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 OR2T10Q8NGZ9 312 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 OR4K13Q8NH42 304 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNRF2Q8NHG8 242 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 SYNPRQ8TBG9 265 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 OR51E1Q8TCB6 317 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 EMG1Q92979 244 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 SDF2Q99470 211 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 SPIN2AQ99865 258 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 ASCL2Q99929 193 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 SPIN2BQ9BPZ2 258 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 HSPB9Q9BQS6 159 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 GGTLC1Q9BX51 225 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 C16orf95Q9H693 158 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 MAP6D1Q9H9H5 199 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 RPRMQ9NS64 109 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 TVP23BQ9NYZ1 205 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 EHFQ9NZC4 300 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 MSRB1Q9NZV6 116 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 SLC2A6Q9UGQ3 507 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 RABAC1Q9UI14 185 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 V9GY05 133 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 FRAS1Q86XX4 4008 aa4.4□□□□□ -1.71
ECHDC1-206ENST00000417628 DUXBA0A1W2PPF3 345 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 GAGE12JA6NER3 117 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 FABP5P3A8MUU1 101 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 H7C1C5 153 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 ERI3O43414 337 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 ZIC3O60481 467 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 DEDDO75618 318 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 GAGE7O76087 117 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 ORM1P02763 201 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 WNT2P09544 360 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 GAGE12FP0CL80 117 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 GAGE12GP0CL81 117 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 GAGE12IP0CL82 117 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 HIST1H1CP16403 213 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 ALOX5APP20292 161 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 RPL12P30050 165 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 PRSS3P35030 304 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 PTGDSP41222 190 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 APOBEC1P41238 236 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 GALR1P47211 349 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 PAX9P55771 341 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 RPS28P62857 69 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 GNB2P62879 340 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 RPL8P62917 257 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 GAGE4Q13068 117 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 PPP1R1AQ13522 171 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 RBMY1FQ15415 496 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 MPV17LQ2QL34 196 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 HLA-DRB5Q30154 266 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 LRRC37A5PQ49AS3 106 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 FFAR4Q5NUL3 377 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 GLYATL3Q5SZD4 288 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 RPS27LQ71UM5 84 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 ZCCHC24Q8N2G6 241 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 KRTCAP2Q8N6L1 136 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF676Q8N7Q3 588 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 CYB561D1Q8N8Q1 229 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 CDRT4Q8N9R6 151 aa4.39□□□□□ -1.71
ECHDC1-206ENST00000417628 DEFB108BQ8NET1 73 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms