RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 RABAC1Q9UI14 185 aa13.53□□□□□ -0.24
VPS16-204ENST00000417508 IGHV3-66A0A0C4DH42 116 aa13.52□□□□□ -0.25
VPS16-204ENST00000417508 SULT1A3P0DMM9 295 aa13.52□□□□□ -0.25
VPS16-204ENST00000417508 SULT1A4P0DMN0 295 aa13.52□□□□□ -0.25
VPS16-204ENST00000417508 P2RY1P47900 373 aa13.52□□□□□ -0.25
VPS16-204ENST00000417508 TMEM187Q14656 261 aa13.52□□□□□ -0.25
VPS16-204ENST00000417508 TIGITQ495A1 244 aa13.52□□□□□ -0.25
VPS16-204ENST00000417508 PRSS54Q6PEW0 395 aa13.52□□□□□ -0.25
VPS16-204ENST00000417508 SLC24A4Q8NFF2 622 aa13.52□□□□□ -0.25
VPS16-204ENST00000417508 LINC00476Q8WZB0 136 aa13.52□□□□□ -0.25
VPS16-204ENST00000417508 SOSTQ9BQB4 213 aa13.52□□□□□ -0.25
VPS16-204ENST00000417508 K7EQG2 157 aa13.51□□□□□ -0.25
VPS16-204ENST00000417508 NOL3O60936 208 aaKnown RBP13.51□□□□□ -0.25
VPS16-204ENST00000417508 IGLC1P0CG04 106 aa13.51□□□□□ -0.25
VPS16-204ENST00000417508 AP2S1P53680 142 aaPredicted RBP13.51□□□□□ -0.25
VPS16-204ENST00000417508 ATP5IP56385 69 aaPredicted RBP13.51□□□□□ -0.25
VPS16-204ENST00000417508 TMEM41BQ5BJD5 291 aa13.51□□□□□ -0.25
VPS16-204ENST00000417508 NMSQ5H8A3 153 aa13.51□□□□□ -0.25
VPS16-204ENST00000417508 STHQ8IWL8 128 aa13.51□□□□□ -0.25
VPS16-204ENST00000417508 OR11H2Q8NH07 326 aa13.51□□□□□ -0.25
VPS16-204ENST00000417508 U3KQ87 197 aa13.51□□□□□ -0.25
VPS16-204ENST00000417508 U3KQE9 123 aa13.51□□□□□ -0.25
VPS16-204ENST00000417508 A0A0B4J2A0 478 aa13.5□□□□□ -0.25
VPS16-204ENST00000417508 HELTA6NFD8 242 aa13.5□□□□□ -0.25
VPS16-204ENST00000417508 FABP12A6NFH5 140 aa13.5□□□□□ -0.25
VPS16-204ENST00000417508 ANXA3P12429 323 aa13.5□□□□□ -0.25
VPS16-204ENST00000417508 OR10J1P30954 320 aa13.5□□□□□ -0.25
VPS16-204ENST00000417508 TNFSF8P32971 234 aa13.5□□□□□ -0.25
VPS16-204ENST00000417508 CCR6P51684 374 aa13.5□□□□□ -0.25
VPS16-204ENST00000417508 RND2P52198 227 aa13.5□□□□□ -0.25
VPS16-204ENST00000417508 STXBP6Q8NFX7 210 aa13.5□□□□□ -0.25
VPS16-204ENST00000417508 SLIRPQ9GZT3 109 aaKnown RBP13.5□□□□□ -0.25
VPS16-204ENST00000417508 MFFQ9GZY8 342 aa13.5□□□□□ -0.25
VPS16-204ENST00000417508 C11orf68Q9H3H3 251 aaKnown RBP13.5□□□□□ -0.25
VPS16-204ENST00000417508 SHPKQ9UHJ6 478 aa13.5□□□□□ -0.25
VPS16-204ENST00000417508 AGRNO00468 2067 aa13.5□□□□□ -0.25
VPS16-204ENST00000417508 LY6G6CO95867 125 aa13.49□□□□□ -0.25
VPS16-204ENST00000417508 CA1P00915 261 aaPredicted RBP13.49□□□□□ -0.25
VPS16-204ENST00000417508 NPY1RP25929 384 aa13.49□□□□□ -0.25
VPS16-204ENST00000417508 SRPXP78539 464 aa13.49□□□□□ -0.25
VPS16-204ENST00000417508 LEMD1Q68G75 181 aa13.49□□□□□ -0.25
VPS16-204ENST00000417508 MCUBQ9NWR8 336 aa13.49□□□□□ -0.25
VPS16-204ENST00000417508 HNRNPCP07910 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
VPS16-204ENST00000417508 AKR1C4P17516 323 aa13.48□□□□□ -0.25
VPS16-204ENST00000417508 FAUP35544 74 aaKnown RBP13.48□□□□□ -0.25
VPS16-204ENST00000417508 SMCO1Q147U7 214 aa13.48□□□□□ -0.25
VPS16-204ENST00000417508 RBMS2Q15434 407 aaKnown RBP13.48□□□□□ -0.25
VPS16-204ENST00000417508 MORN3Q6PF18 240 aaPredicted RBP13.48□□□□□ -0.25
VPS16-204ENST00000417508 LGI3Q8N145 548 aa13.48□□□□□ -0.25
VPS16-204ENST00000417508 FAM24BQ8N5W8 94 aa13.48□□□□□ -0.25
VPS16-204ENST00000417508 PHLDA1Q8WV24 401 aaPredicted RBP13.48□□□□□ -0.25
VPS16-204ENST00000417508 HSPB7Q9UBY9 170 aa13.48□□□□□ -0.25
VPS16-204ENST00000417508 H3BMQ9 156 aa13.47□□□□□ -0.25
VPS16-204ENST00000417508 IFNA10P01566 189 aa13.47□□□□□ -0.25
VPS16-204ENST00000417508 SPP1P10451 314 aa13.47□□□□□ -0.25
VPS16-204ENST00000417508 C16orf54Q6UWD8 224 aa13.47□□□□□ -0.25
VPS16-204ENST00000417508 MCFD2Q8NI22 146 aa13.47□□□□□ -0.25
VPS16-204ENST00000417508 C11orf45Q8TAV5 145 aa13.47□□□□□ -0.25
VPS16-204ENST00000417508 DCANP1Q8TF63 244 aa13.47□□□□□ -0.25
VPS16-204ENST00000417508 TMEM170AQ8WVE7 144 aa13.47□□□□□ -0.25
VPS16-204ENST00000417508 NPIPB3Q92617 1050 aa13.47□□□□□ -0.25
VPS16-204ENST00000417508 SEPSECSQ9HD40 501 aaKnown RBP13.47□□□□□ -0.25
VPS16-204ENST00000417508 IFNA4P05014 189 aa13.46□□□□□ -0.25
VPS16-204ENST00000417508 RD3LP0DJH9 198 aa13.46□□□□□ -0.25
VPS16-204ENST00000417508 AP3S2P59780 193 aa13.46□□□□□ -0.25
VPS16-204ENST00000417508 SUPT4H1P63272 117 aaKnown RBP13.46□□□□□ -0.25
VPS16-204ENST00000417508 TRPT1Q86TN4 253 aaKnown RBP13.46□□□□□ -0.25
VPS16-204ENST00000417508 DTD1Q8TEA8 209 aa13.46□□□□□ -0.25
VPS16-204ENST00000417508 DEDD2Q8WXF8 326 aa13.46□□□□□ -0.25
VPS16-204ENST00000417508 PFDN2Q9UHV9 154 aa13.46□□□□□ -0.25
VPS16-204ENST00000417508 DUXBA0A1W2PPF3 345 aa13.45□□□□□ -0.26
VPS16-204ENST00000417508 TOMM40O96008 361 aa13.45□□□□□ -0.26
VPS16-204ENST00000417508 IL4P05112 153 aa13.45□□□□□ -0.26
VPS16-204ENST00000417508 GPX4P36969 197 aaPredicted RBP13.45□□□□□ -0.26
VPS16-204ENST00000417508 DHRS2Q13268 280 aa13.45□□□□□ -0.26
VPS16-204ENST00000417508 LYZL2Q7Z4W2 148 aa13.45□□□□□ -0.26
VPS16-204ENST00000417508 GLMPQ8WWB7 406 aa13.45□□□□□ -0.26
VPS16-204ENST00000417508 ZNF688P0C7X2 276 aa13.44□□□□□ -0.26
VPS16-204ENST00000417508 NUP62P37198 522 aaPredicted RBP13.44□□□□□ -0.26
VPS16-204ENST00000417508 KLF9Q13886 244 aaPredicted RBP13.44□□□□□ -0.26
VPS16-204ENST00000417508 PLECQ15149 4684 aaKnown RBP13.44□□□□□ -0.26
VPS16-204ENST00000417508 TMEM128Q5BJH2 165 aa13.44□□□□□ -0.26
VPS16-204ENST00000417508 ACY3Q96HD9 319 aa13.44□□□□□ -0.26
VPS16-204ENST00000417508 RBKSQ9H477 322 aa13.44□□□□□ -0.26
VPS16-204ENST00000417508 BUB3O43684 328 aa13.43□□□□□ -0.26
VPS16-204ENST00000417508 NXPH3O95157 252 aa13.43□□□□□ -0.26
VPS16-204ENST00000417508 TCTAP57738 103 aa13.43□□□□□ -0.26
VPS16-204ENST00000417508 SNRPD3P62318 126 aaKnown RBP13.43□□□□□ -0.26
VPS16-204ENST00000417508 USF2Q15853 346 aaPredicted RBP13.43□□□□□ -0.26
VPS16-204ENST00000417508 TOMM5Q8N4H5 51 aa13.43□□□□□ -0.26
VPS16-204ENST00000417508 OR51G1Q8NGK1 321 aa13.43□□□□□ -0.26
VPS16-204ENST00000417508 OR1S1Q8NH92 325 aa13.43□□□□□ -0.26
VPS16-204ENST00000417508 SLC25A21Q9BQT8 299 aaPredicted RBP13.43□□□□□ -0.26
VPS16-204ENST00000417508 HRH4Q9H3N8 390 aa13.43□□□□□ -0.26
VPS16-204ENST00000417508 PRR13Q9NZ81 148 aa13.43□□□□□ -0.26
VPS16-204ENST00000417508 HYDINQ4G0P3 5121 aa13.42□□□□□ -0.26
VPS16-204ENST00000417508 FABP1P07148 127 aa13.42□□□□□ -0.26
VPS16-204ENST00000417508 GIG44P09565 113 aaPredicted RBP13.42□□□□□ -0.26
VPS16-204ENST00000417508 PSG1P11464 419 aa13.42□□□□□ -0.26
VPS16-204ENST00000417508 SLC25A6P12236 298 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms