RNA–Protein interactions for RNA: ENST00000417004.5

PTPN20-209, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 5

Gene PTPN20, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-209	ENST00000417004	RND2	P52198	227 aa		13.96	□□□□□ -0.17
PTPN20-209	ENST00000417004	C2orf83	Q53S99	150 aa		13.96	□□□□□ -0.17
PTPN20-209	ENST00000417004	SLC24A4	Q8NFF2	622 aa		13.96	□□□□□ -0.17
PTPN20-209	ENST00000417004	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.96	□□□□□ -0.17
PTPN20-209	ENST00000417004	RAB2B	Q8WUD1	216 aa		13.96	□□□□□ -0.17
PTPN20-209	ENST00000417004	DIRAS2	Q96HU8	199 aa		13.96	□□□□□ -0.17
PTPN20-209	ENST00000417004	PRRT1	Q99946	306 aa		13.96	□□□□□ -0.17
PTPN20-209	ENST00000417004	BCL7B	Q9BQE9	202 aa		13.96	□□□□□ -0.17
PTPN20-209	ENST00000417004	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN20-209	ENST00000417004	RABL2B	Q9UNT1	228 aa		13.96	□□□□□ -0.17
PTPN20-209	ENST00000417004	GPR132	Q9UNW8	380 aa		13.96	□□□□□ -0.17
PTPN20-209	ENST00000417004	CTDSPL	O15194	276 aa		13.95	□□□□□ -0.18
PTPN20-209	ENST00000417004	DEFB4A	O15263	64 aa		13.95	□□□□□ -0.18
PTPN20-209	ENST00000417004	ZNF688	P0C7X2	276 aa		13.95	□□□□□ -0.18
PTPN20-209	ENST00000417004	IGLC1	P0CG04	106 aa		13.95	□□□□□ -0.18
PTPN20-209	ENST00000417004	OR10J1	P30954	320 aa		13.95	□□□□□ -0.18
PTPN20-209	ENST00000417004	TMBIM6	P55061	237 aa		13.95	□□□□□ -0.18
PTPN20-209	ENST00000417004	PRSS54	Q6PEW0	395 aa		13.95	□□□□□ -0.18
PTPN20-209	ENST00000417004	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPN20-209	ENST00000417004		Q8WTZ3	238 aa		13.95	□□□□□ -0.18
PTPN20-209	ENST00000417004	CACFD1	Q9UGQ2	172 aa		13.95	□□□□□ -0.18
PTPN20-209	ENST00000417004	TMEM56-RWDD3	S4R434	201 aa		13.95	□□□□□ -0.18
PTPN20-209	ENST00000417004	FRAS1	Q86XX4	4008 aa		13.94	□□□□□ -0.18
PTPN20-209	ENST00000417004	HELT	A6NFD8	242 aa		13.94	□□□□□ -0.18
PTPN20-209	ENST00000417004	NXPH3	O95157	252 aa		13.94	□□□□□ -0.18
PTPN20-209	ENST00000417004	TMEM41B	Q5BJD5	291 aa		13.94	□□□□□ -0.18
PTPN20-209	ENST00000417004	ETFRF1	Q6IPR1	90 aa		13.94	□□□□□ -0.18
PTPN20-209	ENST00000417004	TRPT1	Q86TN4	253 aa	Known RBP	13.94	□□□□□ -0.18
PTPN20-209	ENST00000417004	OR51S1	Q8NGJ8	323 aa		13.94	□□□□□ -0.18
PTPN20-209	ENST00000417004	DCANP1	Q8TF63	244 aa		13.94	□□□□□ -0.18
PTPN20-209	ENST00000417004	CCDC59	Q9P031	241 aa	Known RBP	13.94	□□□□□ -0.18
PTPN20-209	ENST00000417004	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
PTPN20-209	ENST00000417004	SULT1A3	P0DMM9	295 aa		13.93	□□□□□ -0.18
PTPN20-209	ENST00000417004	SULT1A4	P0DMN0	295 aa		13.93	□□□□□ -0.18
PTPN20-209	ENST00000417004	SPP1	P10451	314 aa		13.93	□□□□□ -0.18
PTPN20-209	ENST00000417004	NPY1R	P25929	384 aa		13.93	□□□□□ -0.18
PTPN20-209	ENST00000417004	YPEL3	P61236	119 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN20-209	ENST00000417004	DHRS2	Q13268	280 aa		13.93	□□□□□ -0.18
PTPN20-209	ENST00000417004	LGALS9C	Q6DKI2	356 aa		13.93	□□□□□ -0.18
PTPN20-209	ENST00000417004	MORN3	Q6PF18	240 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN20-209	ENST00000417004	NOXA1	Q86UR1	476 aa		13.93	□□□□□ -0.18
PTPN20-209	ENST00000417004	RPP25L	Q8N5L8	163 aa	Known RBP	13.93	□□□□□ -0.18
PTPN20-209	ENST00000417004	KCNIP3	Q9Y2W7	256 aa		13.93	□□□□□ -0.18
PTPN20-209	ENST00000417004	KNCN	A6PVL3	124 aa		13.92	□□□□□ -0.18
PTPN20-209	ENST00000417004	AP2S1	P53680	142 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN20-209	ENST00000417004	IL22RA2	Q969J5	263 aa		13.92	□□□□□ -0.18
PTPN20-209	ENST00000417004	ACY3	Q96HD9	319 aa		13.92	□□□□□ -0.18
PTPN20-209	ENST00000417004	SCP2D1	Q9UJQ7	156 aa		13.92	□□□□□ -0.18
PTPN20-209	ENST00000417004		U3KQE9	123 aa		13.92	□□□□□ -0.18
PTPN20-209	ENST00000417004	ANKRD20A5P	A0PJZ0	165 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	NOL3	O60936	208 aa	Known RBP	13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	IL4	P05112	153 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	GIG44	P09565	113 aa	Predicted RBP	13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	NMS	Q5H8A3	153 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	ACTL10	Q5JWF8	245 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	C16orf54	Q6UWD8	224 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004		Q8NAQ8	132 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	DYNC2LI1	Q8TCX1	351 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	C2CD4C	Q8TF44	421 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	TMEM170A	Q8WVE7	144 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	GLMP	Q8WWB7	406 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	NPIPB3	Q92617	1050 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	SCGB3A2	Q96PL1	93 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	PRR13	Q9NZ81	148 aa		13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	RSL24D1	Q9UHA3	163 aa	Known RBP	13.91	□□□□□ -0.18
PTPN20-209	ENST00000417004	GSTZ1	O43708	216 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN20-209	ENST00000417004	DEDD	O75618	318 aa		13.9	□□□□□ -0.18
PTPN20-209	ENST00000417004	IFNA10	P01566	189 aa		13.9	□□□□□ -0.18
PTPN20-209	ENST00000417004	C4BPB	P20851	252 aa		13.9	□□□□□ -0.18
PTPN20-209	ENST00000417004	USF2	Q15853	346 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN20-209	ENST00000417004	PSMG4	Q5JS54	123 aa		13.9	□□□□□ -0.18
PTPN20-209	ENST00000417004	MCUB	Q9NWR8	336 aa		13.9	□□□□□ -0.18
PTPN20-209	ENST00000417004	IGHV4-28	A0A0C4DH34	117 aa		13.89	□□□□□ -0.19
PTPN20-209	ENST00000417004	TOMM40	O96008	361 aa		13.89	□□□□□ -0.19
PTPN20-209	ENST00000417004	RD3L	P0DJH9	198 aa		13.89	□□□□□ -0.19
PTPN20-209	ENST00000417004	MIF	P14174	115 aa		13.89	□□□□□ -0.19
PTPN20-209	ENST00000417004	AKR1C4	P17516	323 aa		13.89	□□□□□ -0.19
PTPN20-209	ENST00000417004	CCR6	P51684	374 aa		13.89	□□□□□ -0.19
PTPN20-209	ENST00000417004	HRH4	Q9H3N8	390 aa		13.89	□□□□□ -0.19
PTPN20-209	ENST00000417004		H3BMQ9	156 aa		13.88	□□□□□ -0.19
PTPN20-209	ENST00000417004	ANXA3	P12429	323 aa		13.88	□□□□□ -0.19
PTPN20-209	ENST00000417004	TCTA	P57738	103 aa		13.88	□□□□□ -0.19
PTPN20-209	ENST00000417004	SNRPD3	P62318	126 aa	Known RBP	13.88	□□□□□ -0.19
PTPN20-209	ENST00000417004	SMCO1	Q147U7	214 aa		13.88	□□□□□ -0.19
PTPN20-209	ENST00000417004	DTD1	Q8TEA8	209 aa		13.88	□□□□□ -0.19
PTPN20-209	ENST00000417004	RAB40C	Q96S21	281 aa		13.88	□□□□□ -0.19
PTPN20-209	ENST00000417004	HSPB7	Q9UBY9	170 aa		13.88	□□□□□ -0.19
PTPN20-209	ENST00000417004		U3KQ87	197 aa		13.88	□□□□□ -0.19
PTPN20-209	ENST00000417004		A0A0B4J2A0	478 aa		13.87	□□□□□ -0.19
PTPN20-209	ENST00000417004	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.87	□□□□□ -0.19
PTPN20-209	ENST00000417004	C11orf94	C9JXX5	98 aa		13.87	□□□□□ -0.19
PTPN20-209	ENST00000417004	RBMY1A1	P0DJD3	496 aa	Known RBP	13.87	□□□□□ -0.19
PTPN20-209	ENST00000417004	RBMY1C	P0DJD4	496 aa		13.87	□□□□□ -0.19
PTPN20-209	ENST00000417004	RBMY1F	Q15415	496 aa	Known RBP	13.87	□□□□□ -0.19
PTPN20-209	ENST00000417004	SIGLEC15	Q6ZMC9	328 aa		13.87	□□□□□ -0.19
PTPN20-209	ENST00000417004	LYZL2	Q7Z4W2	148 aa		13.87	□□□□□ -0.19
PTPN20-209	ENST00000417004	LGI3	Q8N145	548 aa		13.87	□□□□□ -0.19
PTPN20-209	ENST00000417004	CENPS	Q8N2Z9	138 aa		13.87	□□□□□ -0.19
PTPN20-209	ENST00000417004	RBKS	Q9H477	322 aa		13.87	□□□□□ -0.19
PTPN20-209	ENST00000417004	NRN1	Q9NPD7	142 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms