RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 HTR2BP41595 481 aa11.06□□□□□ -0.64
UBXN4-203ENST00000416538 DEFB131AP59861 70 aa11.06□□□□□ -0.64
UBXN4-203ENST00000416538 KLF9Q13886 244 aaPredicted RBP11.06□□□□□ -0.64
UBXN4-203ENST00000416538 RBMS2Q15434 407 aaKnown RBP11.06□□□□□ -0.64
UBXN4-203ENST00000416538 ZNF79Q15937 498 aa11.06□□□□□ -0.64
UBXN4-203ENST00000416538 MCFD2Q8NI22 146 aa11.06□□□□□ -0.64
UBXN4-203ENST00000416538 LINC00476Q8WZB0 136 aa11.06□□□□□ -0.64
UBXN4-203ENST00000416538 HEYLQ9NQ87 328 aaPredicted RBP11.06□□□□□ -0.64
UBXN4-203ENST00000416538 RABL2AQ9UBK7 228 aaPredicted RBP11.06□□□□□ -0.64
UBXN4-203ENST00000416538 RABL2BQ9UNT1 228 aa11.06□□□□□ -0.64
UBXN4-203ENST00000416538 U3KQE9 123 aa11.06□□□□□ -0.64
UBXN4-203ENST00000416538 CEBPZOSA8MTT3 80 aa11.05□□□□□ -0.64
UBXN4-203ENST00000416538 K7EQG2 157 aa11.05□□□□□ -0.64
UBXN4-203ENST00000416538 P2RY1P47900 373 aa11.05□□□□□ -0.64
UBXN4-203ENST00000416538 USF2Q15853 346 aaPredicted RBP11.05□□□□□ -0.64
UBXN4-203ENST00000416538 LYZL2Q7Z4W2 148 aa11.05□□□□□ -0.64
UBXN4-203ENST00000416538 IL22RA2Q969J5 263 aa11.05□□□□□ -0.64
UBXN4-203ENST00000416538 CSTL1Q9H114 145 aa11.05□□□□□ -0.64
UBXN4-203ENST00000416538 MCUBQ9NWR8 336 aa11.05□□□□□ -0.64
UBXN4-203ENST00000416538 PGPEP1Q9NXJ5 209 aa11.05□□□□□ -0.64
UBXN4-203ENST00000416538 RSL24D1Q9UHA3 163 aaKnown RBP11.05□□□□□ -0.64
UBXN4-203ENST00000416538 TRAV2A0A0B4J234 112 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 FABP12A6NFH5 140 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 MPTX1A8MV57 137 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 GIG44P09565 113 aaPredicted RBP11.04□□□□□ -0.64
UBXN4-203ENST00000416538 SULT1A3P0DMM9 295 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 SULT1A4P0DMN0 295 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 AKR1C4P17516 323 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 NPPCP23582 126 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 NPY1RP25929 384 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 STXBP6Q8NFX7 210 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 OR1S2Q8NGQ3 325 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 DCANP1Q8TF63 244 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 GLMPQ8WWB7 406 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 METTL26Q96S19 204 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 HSPB7Q9UBY9 170 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 RABAC1Q9UI14 185 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 SCP2D1Q9UJQ7 156 aa11.04□□□□□ -0.64
UBXN4-203ENST00000416538 KMT2AQ03164 3969 aa11.03□□□□□ -0.64
UBXN4-203ENST00000416538 A0A0B4J2A0 478 aa11.03□□□□□ -0.64
UBXN4-203ENST00000416538 CA1P00915 261 aaPredicted RBP11.03□□□□□ -0.64
UBXN4-203ENST00000416538 ZNF688P0C7X2 276 aa11.03□□□□□ -0.64
UBXN4-203ENST00000416538 ATF4P18848 351 aaPredicted RBP11.03□□□□□ -0.64
UBXN4-203ENST00000416538 C4BPBP20851 252 aa11.03□□□□□ -0.64
UBXN4-203ENST00000416538 OR10J1P30954 320 aa11.03□□□□□ -0.64
UBXN4-203ENST00000416538 RPL11P62913 178 aaKnown RBP11.03□□□□□ -0.64
UBXN4-203ENST00000416538 RNASEH2CQ8TDP1 164 aaKnown RBP11.03□□□□□ -0.64
UBXN4-203ENST00000416538 RBM38Q9H0Z9 239 aaKnown RBP11.03□□□□□ -0.64
UBXN4-203ENST00000416538 SHPKQ9UHJ6 478 aa11.03□□□□□ -0.64
UBXN4-203ENST00000416538 RPS10-NUDT3A0A1W2PQS6 291 aa11.02□□□□□ -0.65
UBXN4-203ENST00000416538 NUPR2A6NF83 97 aa11.02□□□□□ -0.65
UBXN4-203ENST00000416538 DNASE2O00115 360 aaPredicted RBP11.02□□□□□ -0.65
UBXN4-203ENST00000416538 CD5P06127 495 aa11.02□□□□□ -0.65
UBXN4-203ENST00000416538 PAFAH1B2P68402 229 aa11.02□□□□□ -0.65
UBXN4-203ENST00000416538 SMCO1Q147U7 214 aa11.02□□□□□ -0.65
UBXN4-203ENST00000416538 CEMP1Q6PRD7 247 aaPredicted RBP11.02□□□□□ -0.65
UBXN4-203ENST00000416538 TRPT1Q86TN4 253 aaKnown RBP11.02□□□□□ -0.65
UBXN4-203ENST00000416538 NPIPB3Q92617 1050 aa11.02□□□□□ -0.65
UBXN4-203ENST00000416538 ACY3Q96HD9 319 aa11.02□□□□□ -0.65
UBXN4-203ENST00000416538 RBKSQ9H477 322 aa11.02□□□□□ -0.65
UBXN4-203ENST00000416538 TMEM231Q9H6L2 316 aa11.02□□□□□ -0.65
UBXN4-203ENST00000416538 TRAV30A0A087WSZ9 112 aa11.01□□□□□ -0.65
UBXN4-203ENST00000416538 KNCNA6PVL3 124 aa11.01□□□□□ -0.65
UBXN4-203ENST00000416538 DEFB4AO15263 64 aa11.01□□□□□ -0.65
UBXN4-203ENST00000416538 SLC25A4P12235 298 aa11.01□□□□□ -0.65
UBXN4-203ENST00000416538 LORP23490 312 aaPredicted RBP11.01□□□□□ -0.65
UBXN4-203ENST00000416538 CCR6P51684 374 aa11.01□□□□□ -0.65
UBXN4-203ENST00000416538 CMC4P56277 68 aaPredicted RBP11.01□□□□□ -0.65
UBXN4-203ENST00000416538 YPEL3P61236 119 aaPredicted RBP11.01□□□□□ -0.65
UBXN4-203ENST00000416538 C16orf54Q6UWD8 224 aa11.01□□□□□ -0.65
UBXN4-203ENST00000416538 LINC00528Q8N1L1 170 aa11.01□□□□□ -0.65
UBXN4-203ENST00000416538 OR11H2Q8NH07 326 aa11.01□□□□□ -0.65
UBXN4-203ENST00000416538 DTD1Q8TEA8 209 aa11.01□□□□□ -0.65
UBXN4-203ENST00000416538 GATAD1Q8WUU5 269 aa11.01□□□□□ -0.65
UBXN4-203ENST00000416538 GRAMD2BQ96HH9 432 aa11.01□□□□□ -0.65
UBXN4-203ENST00000416538 RARRES2Q99969 163 aa11.01□□□□□ -0.65
UBXN4-203ENST00000416538 IGKV1D-37A0A075B6S9 117 aa11□□□□□ -0.65
UBXN4-203ENST00000416538 A0A1W2PS18 150 aa11□□□□□ -0.65
UBXN4-203ENST00000416538 PITX3O75364 302 aa11□□□□□ -0.65
UBXN4-203ENST00000416538 IL4P05112 153 aa11□□□□□ -0.65
UBXN4-203ENST00000416538 HNRNPCP07910 306 aaKnown RBP eCLIP11□□□□□ -0.653e-7■■■□□ 14.6
UBXN4-203ENST00000416538 NANOS2P60321 138 aaKnown RBP11□□□□□ -0.65
UBXN4-203ENST00000416538 TMED4Q7Z7H5 227 aa11□□□□□ -0.65
UBXN4-203ENST00000416538 C11orf68Q9H3H3 251 aaKnown RBP11□□□□□ -0.65
UBXN4-203ENST00000416538 KCNIP3Q9Y2W7 256 aa11□□□□□ -0.65
UBXN4-203ENST00000416538 CCDC160A6NGH7 325 aa10.99□□□□□ -0.65
UBXN4-203ENST00000416538 TOMM40O96008 361 aa10.99□□□□□ -0.65
UBXN4-203ENST00000416538 IFNA10P01566 189 aa10.99□□□□□ -0.65
UBXN4-203ENST00000416538 PSG1P11464 419 aa10.99□□□□□ -0.65
UBXN4-203ENST00000416538 PYDC2Q56P42 97 aa10.99□□□□□ -0.65
UBXN4-203ENST00000416538 GSG1LQ6UXU4 331 aa10.99□□□□□ -0.65
UBXN4-203ENST00000416538 CCDC190Q86UF4 302 aa10.99□□□□□ -0.65
UBXN4-203ENST00000416538 LGI3Q8N145 548 aa10.99□□□□□ -0.65
UBXN4-203ENST00000416538 Q8NAQ8 132 aa10.99□□□□□ -0.65
UBXN4-203ENST00000416538 PHLDA1Q8WV24 401 aaPredicted RBP10.99□□□□□ -0.65
UBXN4-203ENST00000416538 SCGB3A2Q96PL1 93 aa10.99□□□□□ -0.65
UBXN4-203ENST00000416538 FRAS1Q86XX4 4008 aa10.98□□□□□ -0.65
UBXN4-203ENST00000416538 LY6G6CO95867 125 aa10.98□□□□□ -0.65
UBXN4-203ENST00000416538 OR51G1Q8NGK1 321 aa10.98□□□□□ -0.65
UBXN4-203ENST00000416538 Q8WTZ3 238 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms