RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 MRGPRG-AS1Q2M3A8 158 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 ACTL10Q5JWF8 245 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 Q8N6K4 173 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 OR5B12Q96R08 314 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 QTRT1Q9BXR0 403 aaKnown RBP12.37□□□□□ -0.43
SHMT2-202ENST00000414700 FKBP11Q9NYL4 201 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 MAST4O15021 2626 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 PIGBOS1A0A0B4J2F0 54 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 KBTBD11O94819 623 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 SLC25A6P12236 298 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 BRS3P32247 399 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 LGALS7P47929 136 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 EBI3Q14213 229 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 PSG5Q15238 335 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 SPINK9Q5DT21 86 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 GBGT1Q8N5D6 347 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 OR2T10Q8NGZ9 312 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 FBXL15Q9H469 300 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 BET1LQ9NYM9 111 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 LY6G6DO95868 133 aa12.36□□□□□ -0.43
SHMT2-202ENST00000414700 SCGB1D1O95968 90 aa12.36□□□□□ -0.43
SHMT2-202ENST00000414700 GALR1P47211 349 aa12.36□□□□□ -0.43
SHMT2-202ENST00000414700 ADIRFQ15847 76 aa12.36□□□□□ -0.43
SHMT2-202ENST00000414700 CYP2G1PQ6ZSU1 146 aa12.36□□□□□ -0.43
SHMT2-202ENST00000414700 CENPVQ7Z7K6 275 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-202ENST00000414700 TMEM219Q86XT9 240 aa12.36□□□□□ -0.43
SHMT2-202ENST00000414700 TMEM217Q8N7C4 229 aa12.36□□□□□ -0.43
SHMT2-202ENST00000414700 OR51G1Q8NGK1 321 aa12.36□□□□□ -0.43
SHMT2-202ENST00000414700 MBD3L1Q8WWY6 194 aa12.36□□□□□ -0.43
SHMT2-202ENST00000414700 ZNF48Q96MX3 618 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-202ENST00000414700 TMUB1Q9BVT8 246 aa12.36□□□□□ -0.43
SHMT2-202ENST00000414700 H3BUX3 64 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 UPK2O00526 184 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 IFNA1P01562 189 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 IFNA5P01569 189 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 FAM106CPP0CH98 169 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 TMEM11P17152 192 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 OR10J1P30954 320 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 BPIFB3P59826 476 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 ID3Q02535 119 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 Q71RC1 249 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-202ENST00000414700 OR4A16Q8NH70 328 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 ZNF430Q9H8G1 570 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-202ENST00000414700 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-202ENST00000414700 NAGKQ9UJ70 344 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 SIGLEC9Q9Y336 463 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 C15orf61A6NNL5 157 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 E7EUB6 86 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 H7BYZ3 331 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 FCN1O00602 326 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 CRYGBP07316 175 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 C10orf55Q5SWW7 151 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 C9orf139Q6ZV77 190 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 TMEM167AQ8TBQ9 72 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 ZDHHC16Q969W1 377 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 TMEM14BQ9NUH8 114 aa12.35□□□□□ -0.43
SHMT2-202ENST00000414700 NCBP2LA6PVI3 153 aaKnown RBP12.34□□□□□ -0.43
SHMT2-202ENST00000414700 RRHO14718 337 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 NBR2O15453 112 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 TMEM50AO95807 157 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 CD99P14209 185 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 RPL29P47914 159 aaKnown RBP12.34□□□□□ -0.43
SHMT2-202ENST00000414700 ELLP55199 621 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-202ENST00000414700 LY6EQ16553 131 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 TMEM241Q24JQ0 296 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 LRRC75BQ2VPJ9 315 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 VMA21Q3ZAQ7 101 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 NECAP1Q8NC96 275 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 NPBQ8NG41 125 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 RNF5Q99942 180 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 SMIM7Q9BQ49 75 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 FUT9Q9Y231 359 aa12.34□□□□□ -0.43
SHMT2-202ENST00000414700 CEBPZOSA8MTT3 80 aa12.33□□□□□ -0.43
SHMT2-202ENST00000414700 NDUFA3O95167 84 aa12.33□□□□□ -0.43
SHMT2-202ENST00000414700 IGHV4-59P01825 116 aa12.33□□□□□ -0.43
SHMT2-202ENST00000414700 TYMSP04818 313 aa12.33□□□□□ -0.43
SHMT2-202ENST00000414700 SSBP2P81877 361 aaPredicted RBP12.33□□□□□ -0.43
SHMT2-202ENST00000414700 BSXQ3C1V8 233 aa12.33□□□□□ -0.43
SHMT2-202ENST00000414700 SLC25A24Q6NUK1 477 aa12.33□□□□□ -0.43
SHMT2-202ENST00000414700 PPP1R27Q86WC6 154 aa12.33□□□□□ -0.43
SHMT2-202ENST00000414700 TMEM37Q8WXS4 190 aa12.33□□□□□ -0.43
SHMT2-202ENST00000414700 RPRMQ9NS64 109 aa12.33□□□□□ -0.43
SHMT2-202ENST00000414700 HSPB7Q9UBY9 170 aa12.33□□□□□ -0.43
SHMT2-202ENST00000414700 RPL8P62917 257 aaKnown RBP12.33□□□□□ -0.44
SHMT2-202ENST00000414700 AARDQ4LEZ3 155 aa12.33□□□□□ -0.44
SHMT2-202ENST00000414700 ARSJQ5FYB0 599 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-202ENST00000414700 LCN15Q6UWW0 184 aa12.33□□□□□ -0.44
SHMT2-202ENST00000414700 ZNF705AQ6ZN79 300 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-202ENST00000414700 TEX45Q8NA69 505 aa12.33□□□□□ -0.44
SHMT2-202ENST00000414700 VSTM2AQ8TAG5 236 aa12.33□□□□□ -0.44
SHMT2-202ENST00000414700 GSX1Q9H4S2 264 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-202ENST00000414700 FOXA2Q9Y261 457 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-202ENST00000414700 TEP1Q99973 2627 aaKnown RBP12.33□□□□□ -0.44
SHMT2-202ENST00000414700 FN1P02751 2386 aaKnown RBP12.33□□□□□ -0.44
SHMT2-202ENST00000414700 CHST1O43916 411 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 PLGLAQ15195 96 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 ZNF726P1Q15940 193 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 Q8N9W7 124 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 TNFRSF19Q9NS68 423 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 NIPBLQ6KC79 2804 aaeCLIP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms