RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CLCF1Q9UBD9 225 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 INTS1Q8N201 2190 aaKnown RBP7.66□□□□□ -1.18
SNHG3-201ENST00000413987 CTXND1A0A1B0GTU2 59 aa7.65□□□□□ -1.18
SNHG3-201ENST00000413987 SPINT2O43291 252 aa7.65□□□□□ -1.18
SNHG3-201ENST00000413987 TMEM267Q0VDI3 215 aaPredicted RBP7.65□□□□□ -1.18
SNHG3-201ENST00000413987 MSMO1Q15800 293 aa7.65□□□□□ -1.18
SNHG3-201ENST00000413987 HLA-DRB5Q30154 266 aa7.65□□□□□ -1.18
SNHG3-201ENST00000413987 OR4C13Q8NGP0 309 aa7.65□□□□□ -1.18
SNHG3-201ENST00000413987 NABP1Q96AH0 204 aa7.65□□□□□ -1.18
SNHG3-201ENST00000413987 SARAFQ96BY9 339 aa7.65□□□□□ -1.18
SNHG3-201ENST00000413987 BORCS8Q96FH0 119 aa7.65□□□□□ -1.18
SNHG3-201ENST00000413987 GMPPAQ96IJ6 420 aaPredicted RBP7.65□□□□□ -1.18
SNHG3-201ENST00000413987 FLNCQ14315 2725 aa7.65□□□□□ -1.19
SNHG3-201ENST00000413987 ARHGAP21Q5T5U3 1957 aa7.65□□□□□ -1.19
SNHG3-201ENST00000413987 IGKV3D-15A0A087WSY6 115 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 ZNF503-AS2A6NEH8 195 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 F5H5K5 113 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 ANGPTL7O43827 346 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 NUPR1O60356 82 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 FOXH1O75593 365 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 TOMM40O96008 361 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 NRASP01111 189 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 KRASP01116 189 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 OR5G3P0C626 314 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 TFPI2P48307 235 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 RPS20P60866 119 aaKnown RBP7.64□□□□□ -1.19
SNHG3-201ENST00000413987 ZNF324BQ6AW86 544 aaPredicted RBP7.64□□□□□ -1.19
SNHG3-201ENST00000413987 ZNF818PQ6ZRF7 136 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 GAPTQ8N292 157 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 VN1R17PQ8TDU5 208 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 TAF15Q92804 592 aaKnown RBP eCLIP7.64□□□□□ -1.19
SNHG3-201ENST00000413987 SPTSSAQ969W0 71 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 Q96MF0 132 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 HSPB9Q9BQS6 159 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 ZNF442Q9H7R0 627 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 PSENENQ9NZ42 101 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 FAM215AQ9Y5M1 114 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 LRBAP50851 2863 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 YLPM1P49750 1951 aaKnown RBP7.64□□□□□ -1.19
SNHG3-201ENST00000413987 UTP20O75691 2785 aaKnown RBP7.64□□□□□ -1.19
SNHG3-201ENST00000413987 CCL25O15444 150 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 SYNGR2O43760 224 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 CFHR3Q02985 330 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 PCSK4Q6UW60 755 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 OR13C6PQ8NH95 151 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 LSM10Q969L4 123 aaKnown RBP7.64□□□□□ -1.19
SNHG3-201ENST00000413987 GPR146Q96CH1 333 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 PRORYQ9H606 182 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 ST3GAL6Q9Y274 331 aa7.64□□□□□ -1.19
SNHG3-201ENST00000413987 C5orf63A6NC05 138 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 F6UZH7 168 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 K7ERU9 68 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 M0R135 149 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 TNFRSF13BO14836 293 aaPredicted RBP7.63□□□□□ -1.19
SNHG3-201ENST00000413987 CRXO43186 299 aaPredicted RBP7.63□□□□□ -1.19
SNHG3-201ENST00000413987 CRISP2P16562 243 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 ADMP35318 185 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 TDRG1Q3Y452 100 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 MORN2Q502X0 79 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 C10orf128Q5T292 105 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 RPP25LQ8N5L8 163 aaKnown RBP7.63□□□□□ -1.19
SNHG3-201ENST00000413987 RND1Q92730 232 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 ZNF799Q96GE5 643 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 DCTN5Q9BTE1 182 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 SAMD10Q9BYL1 202 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 MS4A6AQ9H2W1 248 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 ZNF586Q9NXT0 402 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 LAMTOR2Q9Y2Q5 125 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 H3BP45 60 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 NXPH3O95157 252 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 NDUFB4O95168 129 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 GATA3P23771 443 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 HNRNPA3P51991 378 aaKnown RBP7.63□□□□□ -1.19
SNHG3-201ENST00000413987 TGFBR3Q03167 851 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 FAM27E3Q08E93 113 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 Q0VG73 95 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 GAGE5Q13069 117 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 GAGE6Q13070 117 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 MMDQ15546 238 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 GFRALQ6UXV0 394 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 LINC01551Q86U37 167 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 DOLPP1Q86YN1 238 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 C1orf174Q8IYL3 243 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 SIGLECL1Q8N7X8 197 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 OR5P3Q8WZ94 311 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 TMEM38BQ9NVV0 291 aa7.63□□□□□ -1.19
SNHG3-201ENST00000413987 MDFIC2A0A1B0GVS7 189 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 CD300LBA8K4G0 201 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 PGLYRP1O75594 196 aaPredicted RBP7.62□□□□□ -1.19
SNHG3-201ENST00000413987 LYZL6O75951 148 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 NDUFB8O95169 186 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 LOXP28300 417 aaPredicted RBP7.62□□□□□ -1.19
SNHG3-201ENST00000413987 PSG4Q00888 419 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 PIGYQ3MUY2 71 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 OR4C12Q96R67 309 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 MRPL18Q9H0U6 180 aaKnown RBP7.62□□□□□ -1.19
SNHG3-201ENST00000413987 BET1LQ9NYM9 111 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 DIRC3C9JPN6 131 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 TNFSF12O43508 249 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 COX5AP20674 150 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms