RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 CA1P00915 261 aaPredicted RBP12.38□□□□□ -0.43
COL6A2-205ENST00000413758 IFNA10P01566 189 aa12.38□□□□□ -0.43
COL6A2-205ENST00000413758 SLC25A4P12235 298 aa12.38□□□□□ -0.43
COL6A2-205ENST00000413758 ANXA3P12429 323 aa12.38□□□□□ -0.43
COL6A2-205ENST00000413758 NPY1RP25929 384 aa12.38□□□□□ -0.43
COL6A2-205ENST00000413758 OR10J1P30954 320 aa12.38□□□□□ -0.43
COL6A2-205ENST00000413758 P2RY1P47900 373 aa12.38□□□□□ -0.43
COL6A2-205ENST00000413758 EWSR1Q01844 656 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL6A2-205ENST00000413758 PYDC2Q56P42 97 aa12.38□□□□□ -0.43
COL6A2-205ENST00000413758 ETFRF1Q6IPR1 90 aa12.38□□□□□ -0.43
COL6A2-205ENST00000413758 NOXA1Q86UR1 476 aa12.38□□□□□ -0.43
COL6A2-205ENST00000413758 RNASEH2CQ8TDP1 164 aaKnown RBP12.38□□□□□ -0.43
COL6A2-205ENST00000413758 Q8WTZ3 238 aa12.38□□□□□ -0.43
COL6A2-205ENST00000413758 IL22RA2Q969J5 263 aa12.38□□□□□ -0.43
COL6A2-205ENST00000413758 RARRES2Q99969 163 aa12.38□□□□□ -0.43
COL6A2-205ENST00000413758 SACSQ9NZJ4 4579 aa12.37□□□□□ -0.43
COL6A2-205ENST00000413758 TRAV2A0A0B4J234 112 aa12.37□□□□□ -0.43
COL6A2-205ENST00000413758 IGKV1-17P01599 117 aa12.37□□□□□ -0.43
COL6A2-205ENST00000413758 CRYBB3P26998 211 aa12.37□□□□□ -0.43
COL6A2-205ENST00000413758 FAUP35544 74 aaKnown RBP12.37□□□□□ -0.43
COL6A2-205ENST00000413758 EIF2B2P49770 351 aaKnown RBP12.37□□□□□ -0.43
COL6A2-205ENST00000413758 PRSS54Q6PEW0 395 aa12.37□□□□□ -0.43
COL6A2-205ENST00000413758 STHQ8IWL8 128 aa12.37□□□□□ -0.43
COL6A2-205ENST00000413758 FAM24BQ8N5W8 94 aa12.37□□□□□ -0.43
COL6A2-205ENST00000413758 GATAD1Q8WUU5 269 aa12.37□□□□□ -0.43
COL6A2-205ENST00000413758 ACY3Q96HD9 319 aa12.37□□□□□ -0.43
COL6A2-205ENST00000413758 LYSTQ99698 3801 aa12.37□□□□□ -0.43
COL6A2-205ENST00000413758 CCR6P51684 374 aa12.36□□□□□ -0.43
COL6A2-205ENST00000413758 SMCO1Q147U7 214 aa12.36□□□□□ -0.43
COL6A2-205ENST00000413758 RBMS2Q15434 407 aaKnown RBP12.36□□□□□ -0.43
COL6A2-205ENST00000413758 LYZL2Q7Z4W2 148 aa12.36□□□□□ -0.43
COL6A2-205ENST00000413758 TMED4Q7Z7H5 227 aa12.36□□□□□ -0.43
COL6A2-205ENST00000413758 LGI3Q8N145 548 aa12.36□□□□□ -0.43
COL6A2-205ENST00000413758 OR1S1Q8NH92 325 aa12.36□□□□□ -0.43
COL6A2-205ENST00000413758 KLK5Q9Y337 293 aaPredicted RBP12.36□□□□□ -0.43
COL6A2-205ENST00000413758 A0A0B4J2A0 478 aa12.35□□□□□ -0.43
COL6A2-205ENST00000413758 LY6G6CO95867 125 aa12.35□□□□□ -0.43
COL6A2-205ENST00000413758 HNRNPCP07910 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL6A2-205ENST00000413758 ZNF688P0C7X2 276 aa12.35□□□□□ -0.43
COL6A2-205ENST00000413758 IGLC1P0CG04 106 aa12.35□□□□□ -0.43
COL6A2-205ENST00000413758 AP3S2P59780 193 aa12.35□□□□□ -0.43
COL6A2-205ENST00000413758 SRPXP78539 464 aa12.35□□□□□ -0.43
COL6A2-205ENST00000413758 CEMP1Q6PRD7 247 aaPredicted RBP12.35□□□□□ -0.43
COL6A2-205ENST00000413758 OR11H2Q8NH07 326 aa12.35□□□□□ -0.43
COL6A2-205ENST00000413758 DTD1Q8TEA8 209 aa12.35□□□□□ -0.43
COL6A2-205ENST00000413758 NPIPB3Q92617 1050 aa12.35□□□□□ -0.43
COL6A2-205ENST00000413758 RBKSQ9H477 322 aa12.35□□□□□ -0.43
COL6A2-205ENST00000413758 SHPKQ9UHJ6 478 aa12.35□□□□□ -0.43
COL6A2-205ENST00000413758 HELTA6NFD8 242 aa12.34□□□□□ -0.43
COL6A2-205ENST00000413758 IFNA4P05014 189 aa12.34□□□□□ -0.43
COL6A2-205ENST00000413758 IL4P05112 153 aa12.34□□□□□ -0.43
COL6A2-205ENST00000413758 S100A5P33763 92 aa12.34□□□□□ -0.43
COL6A2-205ENST00000413758 YPEL3P61236 119 aaPredicted RBP12.34□□□□□ -0.43
COL6A2-205ENST00000413758 DHRS2Q13268 280 aa12.34□□□□□ -0.43
COL6A2-205ENST00000413758 NMSQ5H8A3 153 aa12.34□□□□□ -0.43
COL6A2-205ENST00000413758 TOMM5Q8N4H5 51 aa12.34□□□□□ -0.43
COL6A2-205ENST00000413758 SOSTQ9BQB4 213 aa12.34□□□□□ -0.43
COL6A2-205ENST00000413758 U3KQ87 197 aa12.34□□□□□ -0.43
COL6A2-205ENST00000413758 K7EQG2 157 aa12.33□□□□□ -0.44
COL6A2-205ENST00000413758 RD3LP0DJH9 198 aa12.33□□□□□ -0.44
COL6A2-205ENST00000413758 SUPT4H1P63272 117 aaKnown RBP12.33□□□□□ -0.44
COL6A2-205ENST00000413758 TMEM170AQ8WVE7 144 aa12.33□□□□□ -0.44
COL6A2-205ENST00000413758 HSPB7Q9UBY9 170 aa12.33□□□□□ -0.44
COL6A2-205ENST00000413758 PIGBOS1A0A0B4J2F0 54 aa12.32□□□□□ -0.44
COL6A2-205ENST00000413758 KNCNA6PVL3 124 aa12.32□□□□□ -0.44
COL6A2-205ENST00000413758 ATF4P18848 351 aaPredicted RBP12.32□□□□□ -0.44
COL6A2-205ENST00000413758 VAMP1P23763 118 aa12.32□□□□□ -0.44
COL6A2-205ENST00000413758 KLF9Q13886 244 aaPredicted RBP12.32□□□□□ -0.44
COL6A2-205ENST00000413758 LINC00476Q8WZB0 136 aa12.32□□□□□ -0.44
COL6A2-205ENST00000413758 FBXL17Q9UF56 701 aa12.32□□□□□ -0.44
COL6A2-205ENST00000413758 PAIP2BQ9ULR5 123 aaKnown RBP12.32□□□□□ -0.44
COL6A2-205ENST00000413758 DEFB4AO15263 64 aa12.31□□□□□ -0.44
COL6A2-205ENST00000413758 TOMM40O96008 361 aa12.31□□□□□ -0.44
COL6A2-205ENST00000413758 AP2S1P53680 142 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-205ENST00000413758 ACTL10Q5JWF8 245 aa12.31□□□□□ -0.44
COL6A2-205ENST00000413758 C16orf54Q6UWD8 224 aa12.31□□□□□ -0.44
COL6A2-205ENST00000413758 C11orf45Q8TAV5 145 aa12.31□□□□□ -0.44
COL6A2-205ENST00000413758 PHLDA1Q8WV24 401 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-205ENST00000413758 SLC35E1Q96K37 410 aa12.31□□□□□ -0.44
COL6A2-205ENST00000413758 PBDC1Q9BVG4 233 aa12.31□□□□□ -0.44
COL6A2-205ENST00000413758 ZFP92A6NM28 416 aa12.3□□□□□ -0.44
COL6A2-205ENST00000413758 NANOS2P60321 138 aaKnown RBP12.3□□□□□ -0.44
COL6A2-205ENST00000413758 USF2Q15853 346 aaPredicted RBP12.3□□□□□ -0.44
COL6A2-205ENST00000413758 TMEM128Q5BJH2 165 aa12.3□□□□□ -0.44
COL6A2-205ENST00000413758 PSMG4Q5JS54 123 aa12.3□□□□□ -0.44
COL6A2-205ENST00000413758 OR51G1Q8NGK1 321 aa12.3□□□□□ -0.44
COL6A2-205ENST00000413758 TRIM63Q969Q1 353 aa12.3□□□□□ -0.44
COL6A2-205ENST00000413758 MFFQ9GZY8 342 aa12.3□□□□□ -0.44
COL6A2-205ENST00000413758 U3KQE9 123 aa12.3□□□□□ -0.44
COL6A2-205ENST00000413758 IAPPP10997 89 aa12.29□□□□□ -0.44
COL6A2-205ENST00000413758 PSG1P11464 419 aa12.29□□□□□ -0.44
COL6A2-205ENST00000413758 INPP1P49441 399 aa12.29□□□□□ -0.44
COL6A2-205ENST00000413758 MORN3Q6PF18 240 aaPredicted RBP12.29□□□□□ -0.44
COL6A2-205ENST00000413758 TRPT1Q86TN4 253 aaKnown RBP12.29□□□□□ -0.44
COL6A2-205ENST00000413758 DCANP1Q8TF63 244 aa12.29□□□□□ -0.44
COL6A2-205ENST00000413758 GLMPQ8WWB7 406 aa12.29□□□□□ -0.44
COL6A2-205ENST00000413758 C11orf68Q9H3H3 251 aaKnown RBP12.29□□□□□ -0.44
COL6A2-205ENST00000413758 PFDN2Q9UHV9 154 aa12.29□□□□□ -0.44
COL6A2-205ENST00000413758 V9GYH0 126 aa12.29□□□□□ -0.44
COL6A2-205ENST00000413758 ALMS1Q8TCU4 4167 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms