RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 UBE2G2P60604 165 aa-0.47□□□□□ -2.48
RNU4-55P-201ENST00000410731 RAB5BP61020 215 aa-0.47□□□□□ -2.48
RNU4-55P-201ENST00000410731 PMAIP1Q13794 54 aa-0.47□□□□□ -2.48
RNU4-55P-201ENST00000410731 LRRN1Q6UXK5 716 aa-0.47□□□□□ -2.48
RNU4-55P-201ENST00000410731 PLEKHG7Q6ZR37 379 aa-0.47□□□□□ -2.48
RNU4-55P-201ENST00000410731 TOMM6Q96B49 74 aa-0.47□□□□□ -2.48
RNU4-55P-201ENST00000410731 NIPSNAP1Q9BPW8 284 aa-0.47□□□□□ -2.48
RNU4-55P-201ENST00000410731 FBXL12Q9NXK8 326 aa-0.47□□□□□ -2.48
RNU4-55P-201ENST00000410731 TNFSF18Q9UNG2 199 aa-0.47□□□□□ -2.48
RNU4-55P-201ENST00000410731 MYO3BQ8WXR4 1341 aa-0.47□□□□□ -2.48
RNU4-55P-201ENST00000410731 CALUO43852 315 aaPredicted RBP-0.48□□□□□ -2.49
RNU4-55P-201ENST00000410731 MED21Q13503 144 aa-0.48□□□□□ -2.49
RNU4-55P-201ENST00000410731 C12orf74Q32Q52 190 aa-0.48□□□□□ -2.49
RNU4-55P-201ENST00000410731 ALKAL1Q6UXT8 129 aa-0.48□□□□□ -2.49
RNU4-55P-201ENST00000410731 PIGXQ8TBF5 258 aa-0.48□□□□□ -2.49
RNU4-55P-201ENST00000410731 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.48□□□□□ -2.49
RNU4-55P-201ENST00000410731 FLNAP21333 2647 aaKnown RBP-0.48□□□□□ -2.49
RNU4-55P-201ENST00000410731 TTC28Q96AY4 2481 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 IGLV3-32A0A0A0MS00 114 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 APOEP02649 317 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 BLVRAP53004 296 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 CDC42P60953 191 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 ESRGQ1W209 222 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 C6orf52Q5T4I8 152 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 TSPAN32Q96QS1 320 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 OR51V1Q9H2C8 321 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 C11orf68Q9H3H3 251 aaKnown RBP-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 OSTCQ9NRP0 149 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 C14orf105Q9NVL8 296 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 V9GYY5 206 aaPredicted RBP-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 KNTC1P50748 2209 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 F8P00451 2351 aa-0.49□□□□□ -2.49
RNU4-55P-201ENST00000410731 TRAV9-1A0A075B6T8 112 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 DPRXA6NFQ7 191 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 OR5G3P0C626 314 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 RPS12P25398 132 aaKnown RBP-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 BRMS1LQ5PSV4 323 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 LPCAT3Q6P1A2 487 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 HAGHLQ6PII5 290 aaPredicted RBP-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 LINC00301Q8NCQ3 95 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 RAB8BQ92930 207 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 C6orf62Q9GZU0 229 aaPredicted RBP-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 OR51I1Q9H343 314 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 C14orf132Q9NPU4 83 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 CMTM6Q9NX76 183 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 ORMDL1Q9P0S3 153 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 SBF1O95248 1867 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 CACNA1HO95180 2353 aa-0.5□□□□□ -2.49
RNU4-55P-201ENST00000410731 SRRM2Q9UQ35 2752 aaKnown RBP-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 C7orf71A4D174 169 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 EEF1E1-BLOC1S5C9J1V9 151 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 NCOR1O75376 2440 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 ZNF682O95780 498 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 DHFRP00374 187 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 HLA-DRB1P01911 266 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 COX5BP10606 129 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 TRAPPC6BQ86SZ2 158 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 TAF1LQ8IZX4 1826 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 ST6GALNAC3Q8NDV1 305 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 OR52R1Q8NGF1 315 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 PSMF1Q92530 271 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 PRTFDC1Q9NRG1 225 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 TAS2R7Q9NYW3 318 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 TNXBP22105 4242 aa-0.51□□□□□ -2.49
RNU4-55P-201ENST00000410731 ZANQ9Y493 2812 aa-0.52□□□□□ -2.49
RNU4-55P-201ENST00000410731 TCRBV4S1A1TA0A5B7 111 aa-0.52□□□□□ -2.49
RNU4-55P-201ENST00000410731 OR2J2O76002 312 aa-0.52□□□□□ -2.49
RNU4-55P-201ENST00000410731 OR4E1P0C645 316 aa-0.52□□□□□ -2.49
RNU4-55P-201ENST00000410731 SPINT3P49223 89 aa-0.52□□□□□ -2.49
RNU4-55P-201ENST00000410731 OR8D4Q8NGM9 314 aa-0.52□□□□□ -2.49
RNU4-55P-201ENST00000410731 OR10AC1Q8NH08 325 aa-0.52□□□□□ -2.49
RNU4-55P-201ENST00000410731 LINC00052Q96N35 136 aa-0.52□□□□□ -2.49
RNU4-55P-201ENST00000410731 MYO18AQ92614 2054 aaKnown RBP-0.52□□□□□ -2.49
RNU4-55P-201ENST00000410731 HECTD4Q9Y4D8 3996 aa-0.52□□□□□ -2.49
RNU4-55P-201ENST00000410731 TENM4Q6N022 2769 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 EVC2Q86UK5 1308 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 EXOC1LA0A1B0GW35 172 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 M0QZ92 97 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 SKP1P63208 163 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 LINC01554Q52M75 96 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 C20orf196Q8IYI0 205 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 TMEM254Q8TBM7 123 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 PSTPIP2Q9H939 334 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 FGFR1OP2Q9NVK5 253 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 MED29Q9NX70 200 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 TMEM56-RWDD3S4R434 201 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 AHCTF1Q8WYP5 2266 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 KMT2AQ03164 3969 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 PHRF1Q9P1Y6 1649 aaKnown RBP-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 TET1Q8NFU7 2136 aa-0.53□□□□□ -2.49
RNU4-55P-201ENST00000410731 POLQO75417 2590 aa-0.53□□□□□ -2.5
RNU4-55P-201ENST00000410731 LPAP08519 4548 aa-0.54□□□□□ -2.5
RNU4-55P-201ENST00000410731 H0Y980 276 aa-0.54□□□□□ -2.5
RNU4-55P-201ENST00000410731 S100A4P26447 101 aaKnown RBP-0.54□□□□□ -2.5
RNU4-55P-201ENST00000410731 NKX2-5P52952 324 aaPredicted RBP-0.54□□□□□ -2.5
RNU4-55P-201ENST00000410731 FXYD6P3P58550 94 aa-0.54□□□□□ -2.5
RNU4-55P-201ENST00000410731 SNRPD2P62316 118 aaKnown RBP-0.54□□□□□ -2.5
RNU4-55P-201ENST00000410731 OGFRL1Q5TC84 451 aaPredicted RBP-0.54□□□□□ -2.5
RNU4-55P-201ENST00000410731 OR51D1Q8NGF3 324 aa-0.54□□□□□ -2.5
RNU4-55P-201ENST00000410731 C20orf27Q9GZN8 174 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms