RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 NPIPB5A8MRT5 1133 aa11.14□□□□□ -0.63
LIMS2-206ENST00000409754 HLA-DRB1P01911 266 aa11.14□□□□□ -0.63
LIMS2-206ENST00000409754 OR5G3P0C626 314 aa11.14□□□□□ -0.63
LIMS2-206ENST00000409754 GATA2P23769 480 aaPredicted RBP11.14□□□□□ -0.63
LIMS2-206ENST00000409754 IQCF2Q8IXL9 164 aa11.14□□□□□ -0.63
LIMS2-206ENST00000409754 TRGV9Q99603 122 aa11.14□□□□□ -0.63
LIMS2-206ENST00000409754 MEGF9Q9H1U4 602 aa11.14□□□□□ -0.63
LIMS2-206ENST00000409754 C7orf69Q9H7B7 122 aa11.14□□□□□ -0.63
LIMS2-206ENST00000409754 FUT9Q9Y231 359 aa11.14□□□□□ -0.63
LIMS2-206ENST00000409754 FAM74A7A6NL05 159 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 I3L2K1 104 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 IGHV3-48P01763 117 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 ARL14EPLP0DKL9 152 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 CD81P60033 236 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 NDPQ00604 133 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 FAM74A3Q4VXF1 159 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 FAM78BQ5VT40 261 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 SPATA31B1PQ5VZV4 182 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 FAM90A2PQ658T7 463 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 TTC9CQ8N5M4 171 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 LINC01356Q8N9X3 169 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 SUN5Q8TC36 379 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 GATAD1Q8WUU5 269 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 RNF2Q99496 336 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 RASL11BQ9BPW5 248 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 FAM103A1Q9BTL3 118 aaKnown RBP11.13□□□□□ -0.63
LIMS2-206ENST00000409754 HIF1ANQ9NWT6 349 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 SETD2Q9BYW2 2564 aaPredicted RBP11.13□□□□□ -0.63
LIMS2-206ENST00000409754 CUBNO60494 3623 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 IGHV3OR16-10A0A075B7F0 116 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 IGHV7-81A0A0B4J1V7 117 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 PSMB11A5LHX3 300 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 TMEM250H0YL14 139 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 PAGE4O60829 102 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 LY6G6DO95868 133 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 CEBPGP53567 150 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 AWAT1Q58HT5 328 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 ASPHD1Q5U4P2 390 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.13□□□□□ -0.63
LIMS2-206ENST00000409754 MRPL32Q9BYC8 188 aaKnown RBP11.13□□□□□ -0.63
LIMS2-206ENST00000409754 TNFRSF19Q9NS68 423 aa11.13□□□□□ -0.63
LIMS2-206ENST00000409754 IGHV4-38-2P0DP08 117 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 FOSL1P15407 271 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 GCHFRP30047 84 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 ZNF90Q03938 601 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 RHEBQ15382 184 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 BRD3OSQ6XYD6 125 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 MIR17HGQ75NE6 70 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 LURAP1LQ8IV03 231 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 OR1L4Q8NGR5 311 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 OR4X1Q8NH49 305 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 TMEM37Q8WXS4 190 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 PFDN5Q99471 154 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 TXNDC17Q9BRA2 123 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 NIPSNAP3BQ9BS92 247 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 DNAJC4Q9NNZ3 241 aa11.12□□□□□ -0.63
LIMS2-206ENST00000409754 TECRQ9NZ01 308 aaKnown RBP11.12□□□□□ -0.63
LIMS2-206ENST00000409754 PUS1Q9Y606 427 aaKnown RBP eCLIP11.12□□□□□ -0.63
LIMS2-206ENST00000409754 H3BQ15 152 aa11.11□□□□□ -0.63
LIMS2-206ENST00000409754 K7EIM0 57 aa11.11□□□□□ -0.63
LIMS2-206ENST00000409754 M0R036 132 aa11.11□□□□□ -0.63
LIMS2-206ENST00000409754 TAS2R45P59539 299 aa11.11□□□□□ -0.63
LIMS2-206ENST00000409754 BPIFB3P59826 476 aa11.11□□□□□ -0.63
LIMS2-206ENST00000409754 IGLV11-55A0A075B6I3 123 aa11.1□□□□□ -0.63
LIMS2-206ENST00000409754 IGHV3-21A0A0B4J1V1 117 aa11.1□□□□□ -0.63
LIMS2-206ENST00000409754 A0A0U1RQK1 487 aa11.1□□□□□ -0.63
LIMS2-206ENST00000409754 C7orf77A4D0Y5 90 aa11.1□□□□□ -0.63
LIMS2-206ENST00000409754 C11orf94C9JXX5 98 aa11.1□□□□□ -0.63
LIMS2-206ENST00000409754 CLN5O75503 358 aa11.1□□□□□ -0.63
LIMS2-206ENST00000409754 EGR2P11161 476 aaPredicted RBP11.1□□□□□ -0.63
LIMS2-206ENST00000409754 PQLC2Q6ZP29 291 aa11.1□□□□□ -0.63
LIMS2-206ENST00000409754 Q71RC1 249 aaPredicted RBP11.1□□□□□ -0.63
LIMS2-206ENST00000409754 OR4F5Q8NH21 305 aa11.1□□□□□ -0.63
LIMS2-206ENST00000409754 RBM14Q96PK6 669 aaKnown RBP11.1□□□□□ -0.63
LIMS2-206ENST00000409754 OR4F4Q96R69 305 aa11.1□□□□□ -0.63
LIMS2-206ENST00000409754 ELOA3CA0A087WX78 387 aaPredicted RBP11.09□□□□□ -0.63
LIMS2-206ENST00000409754 J3QLI3 93 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 NUPL2O15504 423 aaKnown RBP11.09□□□□□ -0.63
LIMS2-206ENST00000409754 COX7A2P2O60397 106 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 IGLC1P0CG04 106 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 C8orf88P0DMB2 117 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 C10orf113Q5VZT2 155 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 TMEM88Q6PEY1 159 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 CBLN2Q8IUK8 224 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 SGMS2Q8NHU3 365 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 PIFOQ8TCI5 191 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 TVP23CQ96ET8 276 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 HSPB9Q9BQS6 159 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 RPS10P5Q9NQ39 176 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 TMEM167BQ9NRX6 74 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 MOB4Q9Y3A3 225 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 ARL2-SNX15V9GYD0 113 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 HIVEP2P31629 2446 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 PDE6DO43924 150 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 PLP1P60201 277 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 UBE2G2P60604 165 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 KLF17Q5JT82 389 aaPredicted RBP11.09□□□□□ -0.63
LIMS2-206ENST00000409754 C5orf56Q8N8D9 126 aa11.09□□□□□ -0.63
LIMS2-206ENST00000409754 C20orf24Q9BUV8 137 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms