RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SEPSECSQ9HD40 501 aaKnown RBP11.02□□□□□ -0.64
GPNMB-203ENST00000409458 LINC00527Q9UJ94 153 aa11.02□□□□□ -0.64
GPNMB-203ENST00000409458 A0A1W2PPV4 95 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 PSMB11A5LHX3 300 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 IGHG2P01859 326 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 IGLC1P0CG04 106 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 HAGHQ16775 308 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 KLK9Q2XQG4 91 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 SLC35E3Q7Z769 313 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 OR5R1Q8NH85 324 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 PBDC1Q9BVG4 233 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 EIF5A2Q9GZV4 153 aaKnown RBP11.01□□□□□ -0.65
GPNMB-203ENST00000409458 TMPRSS5Q9H3S3 457 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 GNG13Q9P2W3 67 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 KLK9Q9UKQ9 250 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 FLNAP21333 2647 aaKnown RBP11.01□□□□□ -0.65
GPNMB-203ENST00000409458 TRAV41A0A0B4J266 112 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 TMEM218A2RU14 115 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 RBFOX3A6NFN3 312 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 KRBOX1C9JBD0 128 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 CLN5O75503 358 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 ADCYAP1P18509 176 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 SELENOTP62341 195 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 TIGITQ495A1 244 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 PRDM13Q9H4Q3 707 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 THYN1Q9P016 225 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 VPREB3Q9UKI3 123 aa11.01□□□□□ -0.65
GPNMB-203ENST00000409458 LOC102723971A0A1B0GUV8 181 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 F8W735 103 aaPredicted RBP11□□□□□ -0.65
GPNMB-203ENST00000409458 IGHV3-23P01764 117 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 IGF1P05019 195 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 OR5G3P0C626 314 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 STAG3L2P0CL84 134 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 STAG3L3P0CL85 134 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 HIST1H1BP16401 226 aaKnown RBP11□□□□□ -0.65
GPNMB-203ENST00000409458 RHOBP62745 196 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 ICAM4Q14773 271 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 PEA15Q15121 130 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 FAM78BQ5VT40 261 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 MIR17HGQ75NE6 70 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 TMEM37Q8WXS4 190 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 DOK5Q9P104 306 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 FBXL7Q9UJT9 491 aa11□□□□□ -0.65
GPNMB-203ENST00000409458 TRBV9A0A0B4J1U6 114 aa10.99□□□□□ -0.65
GPNMB-203ENST00000409458 HOXA3O43365 443 aaPredicted RBP10.99□□□□□ -0.65
GPNMB-203ENST00000409458 IGKV1-17P01599 117 aa10.99□□□□□ -0.65
GPNMB-203ENST00000409458 SFTA3P0C7M3 94 aa10.99□□□□□ -0.65
GPNMB-203ENST00000409458 ARL14EPLP0DKL9 152 aa10.99□□□□□ -0.65
GPNMB-203ENST00000409458 BCL2P10415 239 aa10.99□□□□□ -0.65
GPNMB-203ENST00000409458 ZNF506Q5JVG8 444 aa10.99□□□□□ -0.65
GPNMB-203ENST00000409458 IQCF2Q8IXL9 164 aa10.99□□□□□ -0.65
GPNMB-203ENST00000409458 TEX29Q8N6K0 151 aa10.99□□□□□ -0.65
GPNMB-203ENST00000409458 GATAD1Q8WUU5 269 aa10.99□□□□□ -0.65
GPNMB-203ENST00000409458 NOL4LQ96MY1 436 aaPredicted RBP10.99□□□□□ -0.65
GPNMB-203ENST00000409458 ZNF355PQ9NSJ1 428 aa10.99□□□□□ -0.65
GPNMB-203ENST00000409458 C21orf62Q9NYP8 219 aa10.99□□□□□ -0.65
GPNMB-203ENST00000409458 FUT9Q9Y231 359 aa10.99□□□□□ -0.65
GPNMB-203ENST00000409458 PPT1P50897 306 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 MFAP4P55083 255 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 RHOGP84095 191 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 PATE2Q6UY27 113 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 SIGLECL1Q8N7X8 197 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 RXFP4Q8TDU9 374 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 YAE1D1Q9NRH1 226 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 COX7A2P2O60397 106 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 PSG1P11464 419 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 NPBWR1P48145 328 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 C15orf32Q32M92 178 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 TMEM95Q3KNT9 176 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 Q56UQ5 140 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 MORN5Q5VZ52 161 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 OR1L4Q8NGR5 311 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 MS4A10Q96PG2 267 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 C19orf24Q9BVV8 132 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 DNAJC4Q9NNZ3 241 aa10.98□□□□□ -0.65
GPNMB-203ENST00000409458 GNG7O60262 68 aa10.97□□□□□ -0.65
GPNMB-203ENST00000409458 CXorf1O96002 111 aa10.97□□□□□ -0.65
GPNMB-203ENST00000409458 IFNA1P01562 189 aa10.97□□□□□ -0.65
GPNMB-203ENST00000409458 SRP14P37108 136 aaKnown RBP10.97□□□□□ -0.65
GPNMB-203ENST00000409458 KHDC3LQ587J8 217 aa10.97□□□□□ -0.65
GPNMB-203ENST00000409458 C10orf113Q5VZT2 155 aa10.97□□□□□ -0.65
GPNMB-203ENST00000409458 OR1B1Q8NGR6 318 aa10.97□□□□□ -0.65
GPNMB-203ENST00000409458 VN1R17PQ8TDU5 208 aa10.97□□□□□ -0.65
GPNMB-203ENST00000409458 UHRF2Q96PU4 802 aa10.97□□□□□ -0.65
GPNMB-203ENST00000409458 PFDN5Q99471 154 aa10.97□□□□□ -0.65
GPNMB-203ENST00000409458 MRPL32Q9BYC8 188 aaKnown RBP10.97□□□□□ -0.65
GPNMB-203ENST00000409458 F8W036 122 aa10.96□□□□□ -0.65
GPNMB-203ENST00000409458 AP4M1O00189 453 aa10.96□□□□□ -0.65
GPNMB-203ENST00000409458 ORM2P19652 201 aa10.96□□□□□ -0.65
GPNMB-203ENST00000409458 PPIFP30405 207 aaKnown RBP10.96□□□□□ -0.65
GPNMB-203ENST00000409458 PLP1P60201 277 aa10.96□□□□□ -0.65
GPNMB-203ENST00000409458 PMS2P11Q13670 270 aa10.96□□□□□ -0.65
GPNMB-203ENST00000409458 NECAP1Q8NC96 275 aa10.96□□□□□ -0.65
GPNMB-203ENST00000409458 ZNF502Q8TBZ5 544 aa10.96□□□□□ -0.65
GPNMB-203ENST00000409458 TECRQ9NZ01 308 aaKnown RBP10.96□□□□□ -0.65
GPNMB-203ENST00000409458 MXRA5Q9NR99 2828 aa10.96□□□□□ -0.66
GPNMB-203ENST00000409458 TRAV5A0A0B4J249 113 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 OR2T8A6NH00 312 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 TOMM40O96008 361 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 APOC3P02656 99 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms