RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 MUC21Q5SSG8 566 aa12.57□□□□□ -0.4
LIMS2-205ENST00000409455 AMMECR1LQ6DCA0 310 aa12.57□□□□□ -0.4
LIMS2-205ENST00000409455 Q6ZT83 130 aa12.57□□□□□ -0.4
LIMS2-205ENST00000409455 MOB3BQ86TA1 216 aa12.57□□□□□ -0.4
LIMS2-205ENST00000409455 MRPL32Q9BYC8 188 aaKnown RBP12.57□□□□□ -0.4
LIMS2-205ENST00000409455 ZNF71Q9NQZ8 489 aaPredicted RBP12.57□□□□□ -0.4
LIMS2-205ENST00000409455 hDV102S1A0JD36 115 aa12.57□□□□□ -0.4
LIMS2-205ENST00000409455 ZNF134P52741 427 aa12.57□□□□□ -0.4
LIMS2-205ENST00000409455 CD177Q8N6Q3 437 aa12.57□□□□□ -0.4
LIMS2-205ENST00000409455 TMEM191AQ9H0A3 160 aa12.57□□□□□ -0.4
LIMS2-205ENST00000409455 J3QR06 171 aa12.56□□□□□ -0.4
LIMS2-205ENST00000409455 PRDX2P32119 198 aa12.56□□□□□ -0.4
LIMS2-205ENST00000409455 FAM120AOSQ5T036 256 aa12.56□□□□□ -0.4
LIMS2-205ENST00000409455 IDI2-AS1Q9NZ38 188 aa12.56□□□□□ -0.4
LIMS2-205ENST00000409455 LEPROTL1O95214 131 aa12.56□□□□□ -0.4
LIMS2-205ENST00000409455 REG1BP48304 166 aa12.56□□□□□ -0.4
LIMS2-205ENST00000409455 CHCHD1Q96BP2 118 aaKnown RBP12.56□□□□□ -0.4
LIMS2-205ENST00000409455 CSTL1Q9H114 145 aa12.56□□□□□ -0.4
LIMS2-205ENST00000409455 PLSCR4Q9NRQ2 329 aa12.56□□□□□ -0.4
LIMS2-205ENST00000409455 PRNDQ9UKY0 176 aa12.56□□□□□ -0.4
LIMS2-205ENST00000409455 TIMM8AO60220 97 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-205ENST00000409455 MYOD1P15172 320 aa12.55□□□□□ -0.4
LIMS2-205ENST00000409455 LOXL3P58215 753 aa12.55□□□□□ -0.4
LIMS2-205ENST00000409455 RPRMLQ8N4K4 120 aa12.55□□□□□ -0.4
LIMS2-205ENST00000409455 URB1-AS1Q96HZ7 61 aa12.55□□□□□ -0.4
LIMS2-205ENST00000409455 PTPRQQ9UMZ3 2332 aa12.55□□□□□ -0.4
LIMS2-205ENST00000409455 IGHV1-24A0A0C4DH33 117 aa12.55□□□□□ -0.4
LIMS2-205ENST00000409455 SH2D7A6NKC9 451 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-205ENST00000409455 PEX7O00628 323 aa12.55□□□□□ -0.4
LIMS2-205ENST00000409455 HBBP68871 147 aa12.55□□□□□ -0.4
LIMS2-205ENST00000409455 SLC25A2Q9BXI2 301 aa12.55□□□□□ -0.4
LIMS2-205ENST00000409455 RP1L1Q8IWN7 2480 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-205ENST00000409455 A0A1B0GXF2 115 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 GAGE12BA1L429 117 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 MBD3L4A6NDZ8 208 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-205ENST00000409455 MBD3L3A6NE82 208 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-205ENST00000409455 MBD3L5A6NJ08 208 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-205ENST00000409455 PRCDQ00LT1 54 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 MBD3L2Q8NHZ7 208 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-205ENST00000409455 LRRC29Q8WV35 223 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 FAM215AQ9Y5M1 114 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 IGF2RP11717 2491 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 F2RL2O00254 374 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 CD5LO43866 347 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 HLA-DRB1P01911 266 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 Q8NA96 180 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 OR9G1Q8NH87 305 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 PPP1R35Q8TAP8 253 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 FAM167A-AS1Q96KT0 104 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 ZNF257Q9Y2Q1 563 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 RAXQ9Y2V3 346 aa12.54□□□□□ -0.4
LIMS2-205ENST00000409455 INTS1Q8N201 2190 aaKnown RBP12.54□□□□□ -0.4
LIMS2-205ENST00000409455 TRAV5A0A0B4J249 113 aa12.53□□□□□ -0.4
LIMS2-205ENST00000409455 CORTO00230 105 aa12.53□□□□□ -0.4
LIMS2-205ENST00000409455 MGST3O14880 152 aa12.53□□□□□ -0.4
LIMS2-205ENST00000409455 PSG9Q00887 426 aa12.53□□□□□ -0.4
LIMS2-205ENST00000409455 SSX8Q7RTT4 187 aa12.53□□□□□ -0.4
LIMS2-205ENST00000409455 SCRT2Q9NQ03 307 aa12.53□□□□□ -0.4
LIMS2-205ENST00000409455 PEF1Q9UBV8 284 aaKnown RBP12.53□□□□□ -0.4
LIMS2-205ENST00000409455 SAA2P0DJI9 122 aaPredicted RBP12.53□□□□□ -0.4
LIMS2-205ENST00000409455 FOXA3P55318 350 aaPredicted RBP12.53□□□□□ -0.4
LIMS2-205ENST00000409455 HIST1H1AQ02539 215 aaPredicted RBP12.53□□□□□ -0.4
LIMS2-205ENST00000409455 FAM71F2Q6NXP2 309 aa12.53□□□□□ -0.4
LIMS2-205ENST00000409455 C1orf229Q6ZS94 237 aaPredicted RBP12.53□□□□□ -0.4
LIMS2-205ENST00000409455 ZNF329Q86UD4 541 aa12.53□□□□□ -0.4
LIMS2-205ENST00000409455 SMIM12Q96EX1 92 aa12.53□□□□□ -0.4
LIMS2-205ENST00000409455 ATP5IP56385 69 aaPredicted RBP12.52□□□□□ -0.4
LIMS2-205ENST00000409455 MORN5Q5VZ52 161 aa12.52□□□□□ -0.4
LIMS2-205ENST00000409455 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.52□□□□□ -0.4
LIMS2-205ENST00000409455 LEAP2Q969E1 77 aa12.52□□□□□ -0.4
LIMS2-205ENST00000409455 MAP1LC3CQ9BXW4 147 aa12.52□□□□□ -0.4
LIMS2-205ENST00000409455 PROCRQ9UNN8 238 aa12.52□□□□□ -0.4
LIMS2-205ENST00000409455 FAM87AP0C7U9 286 aa12.52□□□□□ -0.41
LIMS2-205ENST00000409455 BPIFB3P59826 476 aa12.52□□□□□ -0.41
LIMS2-205ENST00000409455 CR1LQ2VPA4 569 aa12.52□□□□□ -0.41
LIMS2-205ENST00000409455 C2orf83Q53S99 150 aa12.52□□□□□ -0.41
LIMS2-205ENST00000409455 LINC00173Q6ZV60 143 aa12.52□□□□□ -0.41
LIMS2-205ENST00000409455 PAXXQ9BUH6 204 aa12.52□□□□□ -0.41
LIMS2-205ENST00000409455 CALYQ9NYX4 217 aa12.52□□□□□ -0.41
LIMS2-205ENST00000409455 FZR1Q9UM11 496 aa12.52□□□□□ -0.41
LIMS2-205ENST00000409455 LIPFP07098 398 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 PYYP10082 97 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 ADTRPQ96IZ2 230 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 MS4A6AQ9H2W1 248 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 PRR14LQ5THK1 2151 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 IGKV1D-17A0A075B6S4 117 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 VWC2LB2RUY7 222 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 COX7A2P2O60397 106 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 AGFG2O95081 481 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 OR5AL1P0C617 328 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 POU2AF1Q16633 256 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 PRR31Q5SQ13 230 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 C1orf185Q5T7R7 199 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 FAM57AQ8TBR7 257 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 ZNF714Q96N38 554 aa12.51□□□□□ -0.41
LIMS2-205ENST00000409455 CD69Q07108 199 aa12.5□□□□□ -0.41
LIMS2-205ENST00000409455 MLANAQ16655 118 aa12.5□□□□□ -0.41
LIMS2-205ENST00000409455 PET117Q6UWS5 81 aa12.5□□□□□ -0.41
LIMS2-205ENST00000409455 TCF24Q7RTU0 167 aa12.5□□□□□ -0.41
LIMS2-205ENST00000409455 OR1L8Q8NGR8 309 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms