RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SMIM15Q7Z3B0 74 aa10.92□□□□□ -0.66
COL6A2-204ENST00000409416 NABP2Q9BQ15 211 aa10.92□□□□□ -0.66
COL6A2-204ENST00000409416 CSN3P07498 182 aa10.92□□□□□ -0.66
COL6A2-204ENST00000409416 RAB7AP51149 207 aa10.92□□□□□ -0.66
COL6A2-204ENST00000409416 HSPE1P61604 102 aaKnown RBP10.92□□□□□ -0.66
COL6A2-204ENST00000409416 LCN2P80188 198 aa10.92□□□□□ -0.66
COL6A2-204ENST00000409416 Q8N7P7 452 aa10.92□□□□□ -0.66
COL6A2-204ENST00000409416 OR5AU1Q8NGC0 362 aa10.92□□□□□ -0.66
COL6A2-204ENST00000409416 RITA1Q96K30 269 aa10.92□□□□□ -0.66
COL6A2-204ENST00000409416 IDI2-AS1Q9NZ38 188 aa10.92□□□□□ -0.66
COL6A2-204ENST00000409416 RPEL1Q2QD12 228 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 VWC2Q2TAL6 325 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 Q6ZVH6 145 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 MMD2Q8IY49 270 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 PRSS33Q8NF86 280 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 RPEQ96AT9 228 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 INSIG2Q9Y5U4 225 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 E7EUB6 86 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 K7EN84 100 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 YPEL1O60688 119 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 VAMP3Q15836 100 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 ADIPOQQ15848 244 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 TIGITQ495A1 244 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 YPEL2Q96QA6 119 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 TXN2Q99757 166 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 LINC00527Q9UJ94 153 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 IGHV3-66A0A0C4DH42 116 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 C15orf61A6NNL5 157 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 TPPP2P59282 170 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 MMDQ15546 238 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 ST6GALNAC3Q8NDV1 305 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 TECRQ9NZ01 308 aaKnown RBP10.91□□□□□ -0.66
COL6A2-204ENST00000409416 CELSR1Q9NYQ6 3014 aa10.91□□□□□ -0.66
COL6A2-204ENST00000409416 C17orf100A8MU93 164 aa10.9□□□□□ -0.66
COL6A2-204ENST00000409416 CD3EP07766 207 aa10.9□□□□□ -0.66
COL6A2-204ENST00000409416 LOXL3P58215 753 aa10.9□□□□□ -0.66
COL6A2-204ENST00000409416 BEND2Q8NDZ0 799 aa10.9□□□□□ -0.66
COL6A2-204ENST00000409416 GNB4Q9HAV0 340 aa10.9□□□□□ -0.66
COL6A2-204ENST00000409416 TMEM106BQ9NUM4 274 aa10.9□□□□□ -0.66
COL6A2-204ENST00000409416 HIVEP2P31629 2446 aa10.9□□□□□ -0.66
COL6A2-204ENST00000409416 LINC00614P0C842 121 aa10.9□□□□□ -0.66
COL6A2-204ENST00000409416 GPR6P46095 362 aaPredicted RBP10.9□□□□□ -0.66
COL6A2-204ENST00000409416 RPL15P61313 204 aaKnown RBP10.9□□□□□ -0.66
COL6A2-204ENST00000409416 TDRG1Q3Y452 100 aa10.9□□□□□ -0.66
COL6A2-204ENST00000409416 TMEM200BQ69YZ2 307 aa10.9□□□□□ -0.66
COL6A2-204ENST00000409416 BTF3L4Q96K17 158 aa10.9□□□□□ -0.66
COL6A2-204ENST00000409416 GAFA1Q96PS6 74 aa10.9□□□□□ -0.66
COL6A2-204ENST00000409416 FASNP49327 2511 aaKnown RBP10.9□□□□□ -0.66
COL6A2-204ENST00000409416 SLC25A5P05141 298 aaKnown RBP10.9□□□□□ -0.67
COL6A2-204ENST00000409416 RBPJQ06330 500 aa10.9□□□□□ -0.67
COL6A2-204ENST00000409416 FAM57AQ8TBR7 257 aa10.9□□□□□ -0.67
COL6A2-204ENST00000409416 RNASEH2CQ8TDP1 164 aaKnown RBP10.9□□□□□ -0.67
COL6A2-204ENST00000409416 POLR3KQ9Y2Y1 108 aaPredicted RBP10.9□□□□□ -0.67
COL6A2-204ENST00000409416 UTP20O75691 2785 aaKnown RBP10.9□□□□□ -0.67
COL6A2-204ENST00000409416 CGB1A6NKQ9 187 aa10.89□□□□□ -0.67
COL6A2-204ENST00000409416 RPL8P62917 257 aaKnown RBP10.89□□□□□ -0.67
COL6A2-204ENST00000409416 C17orf58Q2M2W7 97 aa10.89□□□□□ -0.67
COL6A2-204ENST00000409416 SIGLECL1Q8N7X8 197 aa10.89□□□□□ -0.67
COL6A2-204ENST00000409416 AMTP48728 403 aa10.89□□□□□ -0.67
COL6A2-204ENST00000409416 PIP4P1Q86T03 277 aa10.89□□□□□ -0.67
COL6A2-204ENST00000409416 FAM222BQ8WU58 562 aa10.89□□□□□ -0.67
COL6A2-204ENST00000409416 SSBP4Q9BWG4 385 aaPredicted RBP10.89□□□□□ -0.67
COL6A2-204ENST00000409416 UBTD1Q9HAC8 227 aa10.89□□□□□ -0.67
COL6A2-204ENST00000409416 IL36BQ9NZH7 164 aa10.89□□□□□ -0.67
COL6A2-204ENST00000409416 M0QZ24 198 aa10.89□□□□□ -0.67
COL6A2-204ENST00000409416 C16orf54Q6UWD8 224 aa10.89□□□□□ -0.67
COL6A2-204ENST00000409416 FAM19A2Q8N3H0 131 aa10.89□□□□□ -0.67
COL6A2-204ENST00000409416 ZCCHC14Q8WYQ9 949 aaKnown RBP10.89□□□□□ -0.67
COL6A2-204ENST00000409416 M0QZK8 103 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 TYMSP04818 313 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 CT45A6P0DMU7 189 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 CT45A5P0DMU8 189 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 CT45A7P0DMV0 189 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 AREGP15514 252 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 MORN5Q5VZ52 161 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 MUC15Q8N387 334 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 GAL3ST2Q9H3Q3 398 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 SLC45A2Q9UMX9 530 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 FOXA3P55318 350 aaPredicted RBP10.88□□□□□ -0.67
COL6A2-204ENST00000409416 FOXL1Q12952 345 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 MBNL2Q5VZF2 373 aaKnown RBP10.88□□□□□ -0.67
COL6A2-204ENST00000409416 IGFL4Q6B9Z1 124 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 RAB1CQ92928 201 aa10.88□□□□□ -0.67
COL6A2-204ENST00000409416 TRAV8-1A0A0A6YYK1 113 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 IGHV1-69-2A0A0G2JMI3 117 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 ZNF253O75346 499 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 KIR2DS2P43631 304 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 UBE2G1P62253 170 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 COA6Q5JTJ3 125 aaKnown RBP10.87□□□□□ -0.67
COL6A2-204ENST00000409416 COL5A1-AS1Q5SY13 56 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 Q6ZS92 163 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 OR2D3Q8NGH3 330 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 VAMP8Q9BV40 100 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 ZNF207O43670 478 aaKnown RBP10.87□□□□□ -0.67
COL6A2-204ENST00000409416 TMEM144Q7Z5S9 345 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 CD99P14209 185 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 Q6ZWC4 215 aa10.87□□□□□ -0.67
COL6A2-204ENST00000409416 C1orf162Q8NEQ5 155 aaPredicted RBP10.87□□□□□ -0.67
COL6A2-204ENST00000409416 ALKBH7Q9BT30 221 aaPredicted RBP10.87□□□□□ -0.67
COL6A2-204ENST00000409416 NGBQ9NPG2 151 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms