RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 TMEM70Q9BUB7 260 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 PAXXQ9BUH6 204 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 ZNF835Q9Y2P0 537 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 TNFSF15O95150 251 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 DHRS13Q6UX07 377 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 MRPL52Q86TS9 123 aaKnown RBP7.78□□□□□ -1.16
SMC1B-202ENST00000404354 OR1B1Q8NGR6 318 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 SLC25A2Q9BXI2 301 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 TMEM14BQ9NUH8 114 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 JPT1Q9UK76 154 aa7.78□□□□□ -1.16
SMC1B-202ENST00000404354 MGST3O14880 152 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 LEPROTL1O95214 131 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 SAA1P0DJI8 122 aaPredicted RBP7.77□□□□□ -1.17
SMC1B-202ENST00000404354 CCL11P51671 97 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 DIAPH2-AS1Q14236 149 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 RBMXL3Q8N7X1 1067 aaKnown RBP7.77□□□□□ -1.17
SMC1B-202ENST00000404354 WDR31Q8NA23 367 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 TEX45Q8NA69 505 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 COMMD5Q9GZQ3 224 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 SAP30LQ9HAJ7 183 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 RIF1Q5UIP0 2472 aaKnown RBP7.77□□□□□ -1.17
SMC1B-202ENST00000404354 M0R1B8 84 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 SAPCD1Q5SSQ6 148 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 IGHV2-70DA0A0C4DH43 119 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 PPIAL4DF5H284 164 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 PEX7O00628 323 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 ZZEF1O43149 2961 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 C17orf58Q2M2W7 97 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 GAL3ST2Q9H3Q3 398 aa7.77□□□□□ -1.17
SMC1B-202ENST00000404354 MRPS16Q9Y3D3 137 aaKnown RBP7.77□□□□□ -1.17
SMC1B-202ENST00000404354 IGHV1-69-2A0A0G2JMI3 117 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 H0YJW9 148 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 C10orf113Q5VZT2 155 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 LINC00305Q7Z4B0 112 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 C9orf106Q8NAJ2 232 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 DDB2Q92466 427 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 FAM167A-AS1Q96KT0 104 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 SPTBN1Q01082 2364 aaKnown RBP7.76□□□□□ -1.17
SMC1B-202ENST00000404354 SAP30O75446 220 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 TMEM177Q53S58 311 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 MUC15Q8N387 334 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 CORO2AQ92828 525 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 HARBI1Q96MB7 349 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 CST9LQ9H4G1 147 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 FNDC4Q9H6D8 234 aaPredicted RBP7.76□□□□□ -1.17
SMC1B-202ENST00000404354 LY96Q9Y6Y9 160 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 ACACAQ13085 2346 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 TTC28Q96AY4 2481 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 IGHV1-24A0A0C4DH33 117 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 TAX1BP3O14907 124 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 CT45A6P0DMU7 189 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 CT45A5P0DMU8 189 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 CT45A7P0DMV0 189 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 CCL3L1P16619 93 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 PATE2Q6UY27 113 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 PPP1R35Q8TAP8 253 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 RAB37Q96AX2 223 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 HILPDAQ9Y5L2 63 aa7.76□□□□□ -1.17
SMC1B-202ENST00000404354 LOC389332A0A1B0GUA5 103 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 LAMTOR5O43504 91 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 RNASE2P10153 161 aaKnown RBP7.75□□□□□ -1.17
SMC1B-202ENST00000404354 ANKRD39Q53RE8 183 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 TMEM164Q5U3C3 297 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 INO80CQ6PI98 192 aaPredicted RBP7.75□□□□□ -1.17
SMC1B-202ENST00000404354 WFDC8Q8IUA0 241 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 WFDC3Q8IUB2 231 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 PRR7Q8TB68 274 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 MBD6Q96DN6 1003 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 FOXA2Q9Y261 457 aaPredicted RBP7.75□□□□□ -1.17
SMC1B-202ENST00000404354 TRAV8-6A0A0B4J262 113 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 TRGV8A0A0C4DH27 118 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 IGHV1-18A0A0C4DH31 117 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 A0A1W2PRE2 83 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 HSBP1L1C9JCN9 74 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 SYS1-DBNDD2H3BUS1 97 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 CHEK1O14757 476 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 ENSAO43768 121 aaKnown RBP7.75□□□□□ -1.17
SMC1B-202ENST00000404354 TOMM40O96008 361 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 TM4SF20Q53R12 229 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 SLC25A34Q6PIV7 304 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 Q6ZT83 130 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 ZNF329Q86UD4 541 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 CIARTQ8N365 385 aaPredicted RBP7.75□□□□□ -1.17
SMC1B-202ENST00000404354 MRPL20Q9BYC9 149 aaKnown RBP7.75□□□□□ -1.17
SMC1B-202ENST00000404354 SLC25A10Q9UBX3 287 aaPredicted RBP7.75□□□□□ -1.17
SMC1B-202ENST00000404354 SPTA1P02549 2419 aa7.75□□□□□ -1.17
SMC1B-202ENST00000404354 TMSB15BA0A087X1C1 80 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 SRRM5B3KS81 715 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 UPK2O00526 184 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 FAM87AP0C7U9 286 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 KIR2DL2P43627 348 aaPredicted RBP7.74□□□□□ -1.17
SMC1B-202ENST00000404354 CDKN1BP46527 198 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 CCL8P80075 99 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 PSG9Q00887 426 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 CD69Q07108 199 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 GTSF1Q8WW33 167 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 ARRDC1-AS1Q9H2J1 176 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 PRCDQ00LT1 54 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 BVES-AS1Q5T3Y7 98 aa7.74□□□□□ -1.17
SMC1B-202ENST00000404354 DAZAP1Q96EP5 407 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms