RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TNFRSF9Q07011 255 aa9.85□□□□□ -0.83
SDF4-203ENST00000403997 ZNF79Q15937 498 aa9.85□□□□□ -0.83
SDF4-203ENST00000403997 ZNF124Q15973 351 aa9.85□□□□□ -0.83
SDF4-203ENST00000403997 DEFB135Q30KP9 77 aa9.85□□□□□ -0.83
SDF4-203ENST00000403997 NARS2Q96I59 477 aaKnown RBP9.85□□□□□ -0.83
SDF4-203ENST00000403997 LCE6AA0A183 80 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 OR10J1P30954 320 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 TMEM128Q5BJH2 165 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 ETFRF1Q6IPR1 90 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 PRSS54Q6PEW0 395 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 CCDC190Q86UF4 302 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 OR1S2Q8NGQ3 325 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 OR1S1Q8NH92 325 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 Q8WTZ3 238 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 TMEM170AQ8WVE7 144 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 RBM38Q9H0Z9 239 aaKnown RBP9.84□□□□□ -0.83
SDF4-203ENST00000403997 MS4A6AQ9H2W1 248 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 RBKSQ9H477 322 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 MAP6D1Q9H9H5 199 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 HSPB7Q9UBY9 170 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 TP53TG1Q9Y2A0 90 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 U3KQ87 197 aa9.84□□□□□ -0.83
SDF4-203ENST00000403997 PIGBOS1A0A0B4J2F0 54 aa9.83□□□□□ -0.84
SDF4-203ENST00000403997 IGLC1P0CG04 106 aa9.83□□□□□ -0.84
SDF4-203ENST00000403997 VAMP1P23763 118 aa9.83□□□□□ -0.84
SDF4-203ENST00000403997 CRYBB3P26998 211 aa9.83□□□□□ -0.84
SDF4-203ENST00000403997 SPANXN2Q5MJ10 180 aa9.83□□□□□ -0.84
SDF4-203ENST00000403997 DTD1Q8TEA8 209 aa9.83□□□□□ -0.84
SDF4-203ENST00000403997 NPIPB3Q92617 1050 aa9.83□□□□□ -0.84
SDF4-203ENST00000403997 ACY3Q96HD9 319 aa9.83□□□□□ -0.84
SDF4-203ENST00000403997 SLC25A21Q9BQT8 299 aaPredicted RBP9.83□□□□□ -0.84
SDF4-203ENST00000403997 CSTL1Q9H114 145 aa9.83□□□□□ -0.84
SDF4-203ENST00000403997 RABAC1Q9UI14 185 aa9.83□□□□□ -0.84
SDF4-203ENST00000403997 A0A0J9YWU9 116 aa9.82□□□□□ -0.84
SDF4-203ENST00000403997 ZNF701M0R085 212 aaPredicted RBP9.82□□□□□ -0.84
SDF4-203ENST00000403997 IFNA4P05014 189 aa9.82□□□□□ -0.84
SDF4-203ENST00000403997 P2RY1P47900 373 aa9.82□□□□□ -0.84
SDF4-203ENST00000403997 DEFB131AP59861 70 aa9.82□□□□□ -0.84
SDF4-203ENST00000403997 YPEL3P61236 119 aaPredicted RBP9.82□□□□□ -0.84
SDF4-203ENST00000403997 RBMS2Q15434 407 aaKnown RBP9.82□□□□□ -0.84
SDF4-203ENST00000403997 DEDD2Q8WXF8 326 aa9.82□□□□□ -0.84
SDF4-203ENST00000403997 RNF183Q96D59 192 aa9.82□□□□□ -0.84
SDF4-203ENST00000403997 GRAMD2BQ96HH9 432 aa9.82□□□□□ -0.84
SDF4-203ENST00000403997 TRAV2A0A0B4J234 112 aa9.81□□□□□ -0.84
SDF4-203ENST00000403997 DUXBA0A1W2PPF3 345 aa9.81□□□□□ -0.84
SDF4-203ENST00000403997 MPTX1A8MV57 137 aa9.81□□□□□ -0.84
SDF4-203ENST00000403997 RD3LP0DJH9 198 aa9.81□□□□□ -0.84
SDF4-203ENST00000403997 INPP1P49441 399 aa9.81□□□□□ -0.84
SDF4-203ENST00000403997 LEMD1Q68G75 181 aa9.81□□□□□ -0.84
SDF4-203ENST00000403997 LYG2Q86SG7 212 aa9.81□□□□□ -0.84
SDF4-203ENST00000403997 STXBP6Q8NFX7 210 aa9.81□□□□□ -0.84
SDF4-203ENST00000403997 BIRC6Q9NR09 4857 aa9.81□□□□□ -0.84
SDF4-203ENST00000403997 SFT2D2O95562 160 aa9.8□□□□□ -0.84
SDF4-203ENST00000403997 HNRNPCP07910 306 aaKnown RBP eCLIP9.8□□□□□ -0.84
SDF4-203ENST00000403997 EIF2B2P49770 351 aaKnown RBP9.8□□□□□ -0.84
SDF4-203ENST00000403997 ATP5IP56385 69 aaPredicted RBP9.8□□□□□ -0.84
SDF4-203ENST00000403997 CENPSQ8N2Z9 138 aa9.8□□□□□ -0.84
SDF4-203ENST00000403997 FAM24BQ8N5W8 94 aa9.8□□□□□ -0.84
SDF4-203ENST00000403997 SRRQ9GZT4 340 aa9.8□□□□□ -0.84
SDF4-203ENST00000403997 K7EQG2 157 aa9.79□□□□□ -0.84
SDF4-203ENST00000403997 PITX3O75364 302 aa9.79□□□□□ -0.84
SDF4-203ENST00000403997 JTBO76095 146 aa9.79□□□□□ -0.84
SDF4-203ENST00000403997 TOMM40O96008 361 aa9.79□□□□□ -0.84
SDF4-203ENST00000403997 IL4P05112 153 aa9.79□□□□□ -0.84
SDF4-203ENST00000403997 IAPPP10997 89 aa9.79□□□□□ -0.84
SDF4-203ENST00000403997 SLC25A6P12236 298 aa9.79□□□□□ -0.84
SDF4-203ENST00000403997 PPP1R1AQ13522 171 aa9.79□□□□□ -0.84
SDF4-203ENST00000403997 TRIQKQ629K1 86 aa9.79□□□□□ -0.84
SDF4-203ENST00000403997 LRTM2Q8N967 370 aa9.79□□□□□ -0.84
SDF4-203ENST00000403997 PAIP2BQ9ULR5 123 aaKnown RBP9.79□□□□□ -0.84
SDF4-203ENST00000403997 U3KQE9 123 aa9.79□□□□□ -0.84
SDF4-203ENST00000403997 CSMD3Q7Z407 3707 aa9.79□□□□□ -0.84
SDF4-203ENST00000403997 LINC00854A0A1B0GVQ3 168 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 CXorf65A6NEN9 183 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 ZFP92A6NM28 416 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 MED6O75586 246 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 HOXB5P09067 269 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 ZNF688P0C7X2 276 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 PSG1P11464 419 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 GPX4P36969 197 aaPredicted RBP9.78□□□□□ -0.84
SDF4-203ENST00000403997 DHRS2Q13268 280 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 PMS2P11Q13670 270 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 GAMTQ14353 236 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 USF2Q15853 346 aaPredicted RBP9.78□□□□□ -0.84
SDF4-203ENST00000403997 BAK1Q16611 211 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 C16orf54Q6UWD8 224 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 STHQ8IWL8 128 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 OR51G1Q8NGK1 321 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 SLC35E1Q96K37 410 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 TMED3Q9Y3Q3 217 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 DYNC2H1Q8NCM8 4307 aaKnown RBP9.78□□□□□ -0.84
SDF4-203ENST00000403997 STARD9Q9P2P6 4700 aa9.78□□□□□ -0.84
SDF4-203ENST00000403997 HELTA6NFD8 242 aa9.77□□□□□ -0.85
SDF4-203ENST00000403997 NAP1L6A6NFF2 107 aa9.77□□□□□ -0.85
SDF4-203ENST00000403997 FAM90A26D6RGX4 464 aa9.77□□□□□ -0.85
SDF4-203ENST00000403997 CA1P00915 261 aaPredicted RBP9.77□□□□□ -0.85
SDF4-203ENST00000403997 AP2S1P53680 142 aaPredicted RBP9.77□□□□□ -0.85
SDF4-203ENST00000403997 RAB11AP62491 216 aa9.77□□□□□ -0.85
SDF4-203ENST00000403997 EWSR1Q01844 656 aaKnown RBP eCLIP9.77□□□□□ -0.853e-8■■■■■ 28.8
SDF4-203ENST00000403997 GGNBP1Q5YKI7 109 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms