RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 MCFD2Q8NI22 146 aa11.29□□□□□ -0.6
TPM1-207ENST00000403994 RNASEH2CQ8TDP1 164 aaKnown RBP11.29□□□□□ -0.6
TPM1-207ENST00000403994 TRIM63Q969Q1 353 aa11.29□□□□□ -0.6
TPM1-207ENST00000403994 CSTL1Q9H114 145 aa11.29□□□□□ -0.6
TPM1-207ENST00000403994 MPTX1A8MV57 137 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 SLC25A4P12235 298 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 NPY1RP25929 384 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 OR10J1P30954 320 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 P2RY1P47900 373 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 DEFB131AP59861 70 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 RPL11P62913 178 aaKnown RBP11.28□□□□□ -0.6
TPM1-207ENST00000403994 LEMD1Q68G75 181 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 STXBP6Q8NFX7 210 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 OR1S2Q8NGQ3 325 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 GATAD1Q8WUU5 269 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 LINC00476Q8WZB0 136 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 RABAC1Q9UI14 185 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 AGRNO00468 2067 aa11.28□□□□□ -0.6
TPM1-207ENST00000403994 TRAV30A0A087WSZ9 112 aa11.27□□□□□ -0.61
TPM1-207ENST00000403994 A0A0B4J2A0 478 aa11.27□□□□□ -0.61
TPM1-207ENST00000403994 A0A1W2PS18 150 aa11.27□□□□□ -0.61
TPM1-207ENST00000403994 FABP12A6NFH5 140 aa11.27□□□□□ -0.61
TPM1-207ENST00000403994 CA1P00915 261 aaPredicted RBP11.27□□□□□ -0.61
TPM1-207ENST00000403994 AKR1C4P17516 323 aa11.27□□□□□ -0.61
TPM1-207ENST00000403994 KLF9Q13886 244 aaPredicted RBP11.27□□□□□ -0.61
TPM1-207ENST00000403994 SCGB3A2Q96PL1 93 aa11.27□□□□□ -0.61
TPM1-207ENST00000403994 HSPB7Q9UBY9 170 aa11.27□□□□□ -0.61
TPM1-207ENST00000403994 CACFD1Q9UGQ2 172 aa11.27□□□□□ -0.61
TPM1-207ENST00000403994 SHPKQ9UHJ6 478 aa11.27□□□□□ -0.61
TPM1-207ENST00000403994 KMT2AQ03164 3969 aa11.27□□□□□ -0.61
TPM1-207ENST00000403994 FRAS1Q86XX4 4008 aa11.26□□□□□ -0.61
TPM1-207ENST00000403994 K7EQG2 157 aa11.26□□□□□ -0.61
TPM1-207ENST00000403994 YPEL3P61236 119 aaPredicted RBP11.26□□□□□ -0.61
TPM1-207ENST00000403994 SRPXP78539 464 aa11.26□□□□□ -0.61
TPM1-207ENST00000403994 SMCO1Q147U7 214 aa11.26□□□□□ -0.61
TPM1-207ENST00000403994 LYZL2Q7Z4W2 148 aa11.26□□□□□ -0.61
TPM1-207ENST00000403994 TMEM217Q8N7C4 229 aa11.26□□□□□ -0.61
TPM1-207ENST00000403994 NARS2Q96I59 477 aaKnown RBP11.26□□□□□ -0.61
TPM1-207ENST00000403994 C11orf68Q9H3H3 251 aaKnown RBP11.26□□□□□ -0.61
TPM1-207ENST00000403994 KCNIP3Q9Y2W7 256 aa11.26□□□□□ -0.61
TPM1-207ENST00000403994 V9GYH0 126 aa11.26□□□□□ -0.61
TPM1-207ENST00000403994 FAUP35544 74 aaKnown RBP11.25□□□□□ -0.61
TPM1-207ENST00000403994 CCR6P51684 374 aa11.25□□□□□ -0.61
TPM1-207ENST00000403994 RBMS2Q15434 407 aaKnown RBP11.25□□□□□ -0.61
TPM1-207ENST00000403994 USF2Q15853 346 aaPredicted RBP11.25□□□□□ -0.61
TPM1-207ENST00000403994 CEMP1Q6PRD7 247 aaPredicted RBP11.25□□□□□ -0.61
TPM1-207ENST00000403994 DTD1Q8TEA8 209 aa11.25□□□□□ -0.61
TPM1-207ENST00000403994 DCANP1Q8TF63 244 aa11.25□□□□□ -0.61
TPM1-207ENST00000403994 ACY3Q96HD9 319 aa11.25□□□□□ -0.61
TPM1-207ENST00000403994 GRAMD2BQ96HH9 432 aa11.25□□□□□ -0.61
TPM1-207ENST00000403994 RARRES2Q99969 163 aa11.25□□□□□ -0.61
TPM1-207ENST00000403994 U3KQE9 123 aa11.25□□□□□ -0.61
TPM1-207ENST00000403994 IFNA10P01566 189 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 IL4P05112 153 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 HNRNPCP07910 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
TPM1-207ENST00000403994 ZNF688P0C7X2 276 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 ANXA3P12429 323 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 ZNF79Q15937 498 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 PYDC2Q56P42 97 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 ETFRF1Q6IPR1 90 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 STHQ8IWL8 128 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 LGI3Q8N145 548 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 OR11H2Q8NH07 326 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 GLMPQ8WWB7 406 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 NPIPB3Q92617 1050 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 RBKSQ9H477 322 aa11.24□□□□□ -0.61
TPM1-207ENST00000403994 TOMM40O96008 361 aa11.23□□□□□ -0.61
TPM1-207ENST00000403994 AP3S2P59780 193 aa11.23□□□□□ -0.61
TPM1-207ENST00000403994 C16orf54Q6UWD8 224 aa11.23□□□□□ -0.61
TPM1-207ENST00000403994 TMED4Q7Z7H5 227 aa11.23□□□□□ -0.61
TPM1-207ENST00000403994 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
TPM1-207ENST00000403994 NOXA1Q86UR1 476 aa11.23□□□□□ -0.61
TPM1-207ENST00000403994 TOMM5Q8N4H5 51 aa11.23□□□□□ -0.61
TPM1-207ENST00000403994 Q8WTZ3 238 aa11.23□□□□□ -0.61
TPM1-207ENST00000403994 U3KQ87 197 aa11.23□□□□□ -0.61
TPM1-207ENST00000403994 HELTA6NFD8 242 aa11.22□□□□□ -0.61
TPM1-207ENST00000403994 GIG44P09565 113 aaPredicted RBP11.22□□□□□ -0.61
TPM1-207ENST00000403994 C4BPBP20851 252 aa11.22□□□□□ -0.61
TPM1-207ENST00000403994 EIF2B2P49770 351 aaKnown RBP11.22□□□□□ -0.61
TPM1-207ENST00000403994 OR1S1Q8NH92 325 aa11.22□□□□□ -0.61
TPM1-207ENST00000403994 VPS13DQ5THJ4 4388 aa11.21□□□□□ -0.61
TPM1-207ENST00000403994 DUXBA0A1W2PPF3 345 aa11.21□□□□□ -0.61
TPM1-207ENST00000403994 CCDC160A6NGH7 325 aa11.21□□□□□ -0.61
TPM1-207ENST00000403994 KNCNA6PVL3 124 aa11.21□□□□□ -0.61
TPM1-207ENST00000403994 RD3LP0DJH9 198 aa11.21□□□□□ -0.61
TPM1-207ENST00000403994 DHRS2Q13268 280 aa11.21□□□□□ -0.61
TPM1-207ENST00000403994 TMEM128Q5BJH2 165 aa11.21□□□□□ -0.61
TPM1-207ENST00000403994 PHLDA1Q8WV24 401 aaPredicted RBP11.21□□□□□ -0.61
TPM1-207ENST00000403994 RBM38Q9H0Z9 239 aaKnown RBP11.21□□□□□ -0.61
TPM1-207ENST00000403994 KLK5Q9Y337 293 aaPredicted RBP11.21□□□□□ -0.61
TPM1-207ENST00000403994 PIGBOS1A0A0B4J2F0 54 aa11.2□□□□□ -0.62
TPM1-207ENST00000403994 PITX3O75364 302 aa11.2□□□□□ -0.62
TPM1-207ENST00000403994 LY6G6CO95867 125 aa11.2□□□□□ -0.62
TPM1-207ENST00000403994 SPP1P10451 314 aa11.2□□□□□ -0.62
TPM1-207ENST00000403994 PSG1P11464 419 aa11.2□□□□□ -0.62
TPM1-207ENST00000403994 VAMP1P23763 118 aa11.2□□□□□ -0.62
TPM1-207ENST00000403994 NANOS2P60321 138 aaKnown RBP11.2□□□□□ -0.62
TPM1-207ENST00000403994 PSMG4Q5JS54 123 aa11.2□□□□□ -0.62
TPM1-207ENST00000403994 CCDC190Q86UF4 302 aa11.2□□□□□ -0.62
TPM1-207ENST00000403994 Q8NAQ8 132 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1653.9 ms