RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 ERHP84090 104 aaKnown RBP16.03■□□□□ 0.16
CCDC47-202ENST00000403162 SLAQ13239 276 aa16.03■□□□□ 0.16
CCDC47-202ENST00000403162 BATFQ16520 125 aa16.03■□□□□ 0.16
CCDC47-202ENST00000403162 DEFB108BQ8NET1 73 aa16.03■□□□□ 0.16
CCDC47-202ENST00000403162 C18orf32Q8TCD1 76 aa16.03■□□□□ 0.16
CCDC47-202ENST00000403162 FAM168AQ92567 244 aa16.03■□□□□ 0.16
CCDC47-202ENST00000403162 AMMECR1Q9Y4X0 333 aaPredicted RBP16.03■□□□□ 0.16
CCDC47-202ENST00000403162 CA1P00915 261 aaPredicted RBP16.03■□□□□ 0.16
CCDC47-202ENST00000403162 IGHV1-46P01743 117 aa16.03■□□□□ 0.16
CCDC47-202ENST00000403162 IGLC2P0DOY2 106 aa16.03■□□□□ 0.16
CCDC47-202ENST00000403162 IGLC3P0DOY3 106 aa16.03■□□□□ 0.16
CCDC47-202ENST00000403162 ZNRD1Q9P1U0 126 aa16.03■□□□□ 0.16
CCDC47-202ENST00000403162 LINC00312Q9Y6C7 94 aa16.03■□□□□ 0.16
CCDC47-202ENST00000403162 KALRNO60229 2985 aa16.03■□□□□ 0.16
CCDC47-202ENST00000403162 POLEQ07864 2286 aa16.03■□□□□ 0.16
CCDC47-202ENST00000403162 IGSF10Q6WRI0 2623 aa16.02■□□□□ 0.16
CCDC47-202ENST00000403162 hADV38S2A0JD32 116 aa16.02■□□□□ 0.16
CCDC47-202ENST00000403162 DPRXA6NFQ7 191 aa16.02■□□□□ 0.16
CCDC47-202ENST00000403162 APOA2P02652 100 aa16.02■□□□□ 0.16
CCDC47-202ENST00000403162 SELENOVP59797 346 aa16.02■□□□□ 0.16
CCDC47-202ENST00000403162 RPL8P62917 257 aaKnown RBP16.02■□□□□ 0.16
CCDC47-202ENST00000403162 NHLRC2Q8NBF2 726 aa16.02■□□□□ 0.16
CCDC47-202ENST00000403162 OR1L4Q8NGR5 311 aa16.02■□□□□ 0.16
CCDC47-202ENST00000403162 OR2T6Q8NHC8 308 aa16.02■□□□□ 0.16
CCDC47-202ENST00000403162 HARBI1Q96MB7 349 aa16.02■□□□□ 0.16
CCDC47-202ENST00000403162 BBC3Q96PG8 261 aaPredicted RBP16.02■□□□□ 0.16
CCDC47-202ENST00000403162 TEX36Q5VZQ5 186 aa16.02■□□□□ 0.15
CCDC47-202ENST00000403162 ZNF329Q86UD4 541 aa16.02■□□□□ 0.15
CCDC47-202ENST00000403162 GRAMD2BQ96HH9 432 aa16.02■□□□□ 0.15
CCDC47-202ENST00000403162 LINC00479Q96M42 142 aa16.02■□□□□ 0.15
CCDC47-202ENST00000403162 MRPL20Q9BYC9 149 aaKnown RBP16.02■□□□□ 0.15
CCDC47-202ENST00000403162 CADP27708 2225 aa16.01■□□□□ 0.15
CCDC47-202ENST00000403162 YLPM1P49750 1951 aaKnown RBP16.01■□□□□ 0.15
CCDC47-202ENST00000403162 A0A1W2PN81 502 aa16.01■□□□□ 0.15
CCDC47-202ENST00000403162 PEX7O00628 323 aa16.01■□□□□ 0.15
CCDC47-202ENST00000403162 COX7A2P2O60397 106 aa16.01■□□□□ 0.15
CCDC47-202ENST00000403162 HYPMO75409 117 aa16.01■□□□□ 0.15
CCDC47-202ENST00000403162 TMEM177Q53S58 311 aa16.01■□□□□ 0.15
CCDC47-202ENST00000403162 FAM19A2Q8N3H0 131 aa16.01■□□□□ 0.15
CCDC47-202ENST00000403162 BORCS7Q96B45 105 aa16.01■□□□□ 0.15
CCDC47-202ENST00000403162 PAXXQ9BUH6 204 aa16.01■□□□□ 0.15
CCDC47-202ENST00000403162 SSBP3Q9BWW4 388 aaPredicted RBP16.01■□□□□ 0.15
CCDC47-202ENST00000403162 ZNF355PQ9NSJ1 428 aa16.01■□□□□ 0.15
CCDC47-202ENST00000403162 H0YJW9 148 aa16■□□□□ 0.15
CCDC47-202ENST00000403162 C10orf113Q5VZT2 155 aa16■□□□□ 0.15
CCDC47-202ENST00000403162 PRB1P04280 392 aa16■□□□□ 0.15
CCDC47-202ENST00000403162 TNFSF4P23510 183 aa16■□□□□ 0.15
CCDC47-202ENST00000403162 KLF5Q13887 457 aaPredicted RBP16■□□□□ 0.15
CCDC47-202ENST00000403162 CYB5R2Q6BCY4 276 aa16■□□□□ 0.15
CCDC47-202ENST00000403162 KLHDC1Q8N7A1 406 aa16■□□□□ 0.15
CCDC47-202ENST00000403162 OR5AN1Q8NGI8 311 aa16■□□□□ 0.15
CCDC47-202ENST00000403162 CHRDL1Q9BU40 450 aa16■□□□□ 0.15
CCDC47-202ENST00000403162 ZNF430Q9H8G1 570 aaPredicted RBP16■□□□□ 0.15
CCDC47-202ENST00000403162 ZFP30Q9Y2G7 519 aa16■□□□□ 0.15
CCDC47-202ENST00000403162 EPG5Q9HCE0 2579 aa16■□□□□ 0.15
CCDC47-202ENST00000403162 NBASA2RRP1 2371 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 PYYP10082 97 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 GNLYP22749 145 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 CHRNB4P30926 498 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 MFAP2P55001 183 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 BPIFB3P59826 476 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 SSBP2P81877 361 aaPredicted RBP15.99■□□□□ 0.15
CCDC47-202ENST00000403162 FAM27E3Q08E93 113 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 MMDQ15546 238 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 NUP35Q8NFH5 326 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 NUDT10Q8NFP7 164 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 OR4A5Q8NH83 315 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 NUDT11Q96G61 164 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 GAL3ST2Q9H3Q3 398 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 TCRBV4S1A1TA0A5B7 111 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 UQCRFS1P47985 274 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 PATE2Q6UY27 113 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 TMEM167AQ8TBQ9 72 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 JKAMPQ9P055 326 aa15.99■□□□□ 0.15
CCDC47-202ENST00000403162 OR2J3O76001 311 aa15.98■□□□□ 0.15
CCDC47-202ENST00000403162 FSTL3O95633 263 aa15.98■□□□□ 0.15
CCDC47-202ENST00000403162 NTF3P20783 257 aa15.98■□□□□ 0.15
CCDC47-202ENST00000403162 PMCHL1Q16048 86 aa15.98■□□□□ 0.15
CCDC47-202ENST00000403162 GDF5OSQ5U4N7 250 aa15.98■□□□□ 0.15
CCDC47-202ENST00000403162 THAP8Q8NA92 274 aa15.98■□□□□ 0.15
CCDC47-202ENST00000403162 TXN2Q99757 166 aa15.98■□□□□ 0.15
CCDC47-202ENST00000403162 FNDC4Q9H6D8 234 aaPredicted RBP15.98■□□□□ 0.15
CCDC47-202ENST00000403162 SAP30LQ9HAJ7 183 aa15.98■□□□□ 0.15
CCDC47-202ENST00000403162 DYSFO75923 2080 aa15.97■□□□□ 0.15
CCDC47-202ENST00000403162 E7EUB6 86 aa15.97■□□□□ 0.15
CCDC47-202ENST00000403162 MEF2CQ06413 473 aaPredicted RBP15.97■□□□□ 0.15
CCDC47-202ENST00000403162 Q6ZN92 141 aa15.97■□□□□ 0.15
CCDC47-202ENST00000403162 FLYWCH2Q96CP2 140 aaKnown RBP15.97■□□□□ 0.15
CCDC47-202ENST00000403162 FXYD5Q96DB9 178 aa15.97■□□□□ 0.15
CCDC47-202ENST00000403162 C7orf69Q9H7B7 122 aa15.97■□□□□ 0.15
CCDC47-202ENST00000403162 IGKV1D-37A0A075B6S9 117 aa15.97■□□□□ 0.15
CCDC47-202ENST00000403162 TFPI2P48307 235 aa15.97■□□□□ 0.15
CCDC47-202ENST00000403162 HNRNPA3P51991 378 aaKnown RBP15.97■□□□□ 0.15
CCDC47-202ENST00000403162 ADORA2A-AS1P86434 159 aa15.97■□□□□ 0.15
CCDC47-202ENST00000403162 VSTM2AQ8TAG5 236 aa15.97■□□□□ 0.15
CCDC47-202ENST00000403162 CLEC7AQ9BXN2 247 aa15.97■□□□□ 0.15
CCDC47-202ENST00000403162 PCNX1Q96RV3 2341 aa15.96■□□□□ 0.15
CCDC47-202ENST00000403162 TRAV34A0A0B4J273 112 aa15.96■□□□□ 0.15
CCDC47-202ENST00000403162 NKX6-3A6NJ46 265 aa15.96■□□□□ 0.15
CCDC47-202ENST00000403162 CGB1A6NKQ9 187 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms