RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 ZP3P21754 424 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 OR10J1P30954 320 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 DLK1P80370 383 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 RELQ04864 619 aaPredicted RBP6.92□□□□□ -1.3
BRCC3-206ENST00000399042 GAMTQ14353 236 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 DEFB136Q30KP8 78 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 FAM106AQ4KMX7 169 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 ZNF343Q6P1L6 599 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 SPSB3Q6PJ21 355 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 C18orf65Q6ZTR6 163 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 ZNF709Q8N972 641 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 OR11H1Q8NG94 326 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 OR4X1Q8NH49 305 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 ZNF502Q8TBZ5 544 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 BSCL2Q96G97 398 aaPredicted RBP6.92□□□□□ -1.3
BRCC3-206ENST00000399042 TMEM147Q9BVK8 224 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 FNDC4Q9H6D8 234 aaPredicted RBP6.92□□□□□ -1.3
BRCC3-206ENST00000399042 NPVFQ9HCQ7 196 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 HSPB11Q9Y547 144 aa6.92□□□□□ -1.3
BRCC3-206ENST00000399042 BORCS7-ASMTA0A0B4J1R7 106 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 IGHV3-35A0A0C4DH35 117 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 KANTRA0A1W2PQU2 76 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 CCL24O00175 119 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 TGOLN2O43493 480 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 CLN5O75503 358 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 OR2C1O95371 312 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 GHRHP01286 108 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 C1QBP02746 253 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 LYL1P12980 280 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 C4BPBP20851 252 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 FGF7P21781 194 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 EIF2B2P49770 351 aaKnown RBP6.91□□□□□ -1.3
BRCC3-206ENST00000399042 KRTAP10-3P60369 221 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 ZNF616Q08AN1 781 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 TEPPQ6URK8 271 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 WIPF2Q8TF74 440 aaPredicted RBP6.91□□□□□ -1.3
BRCC3-206ENST00000399042 Q8WTZ3 238 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 HYLS1Q96M11 299 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 DUX3Q96PT4 197 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 ATP5SQ99766 215 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 C20orf24Q9BUV8 137 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 C11orf1Q9H5F2 150 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 TNFSF18Q9UNG2 199 aa6.91□□□□□ -1.3
BRCC3-206ENST00000399042 IGHV4OR15-8A0A075B7B6 117 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 A0A087WW49 117 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 A0A0D9SG52 128 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 HMSDA8MTL9 139 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 RD3LP0DJH9 198 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 ARL16Q0P5N6 197 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 OR2F1Q13607 317 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 KIAA0141Q14154 515 aaPredicted RBP6.9□□□□□ -1.3
BRCC3-206ENST00000399042 ZNF266Q14584 549 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 TIGITQ495A1 244 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 PVRIGQ6DKI7 326 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 BTNL8Q6UX41 500 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 MYOZ3Q8TDC0 251 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 PPP1R14BQ96C90 147 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 CCDC140Q96MF4 163 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 AQP10Q96PS8 301 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 CITED1Q99966 193 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 ARL6Q9H0F7 186 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 FBXL17Q9UF56 701 aa6.9□□□□□ -1.3
BRCC3-206ENST00000399042 TET2Q6N021 2002 aaPredicted RBP6.89□□□□□ -1.31
BRCC3-206ENST00000399042 PMS2P5A8MQ11 134 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 FNDC10F2Z333 226 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 C17orf112F2Z3M2 114 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 FAM229AH3BQW9 127 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 I3L521 148 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 TAAR5O14804 337 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 TRBV12-3P01733 135 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 HNRNPCP07910 306 aaKnown RBP eCLIP6.89□□□□□ -1.31
BRCC3-206ENST00000399042 HOXD3P31249 432 aaPredicted RBP6.89□□□□□ -1.31
BRCC3-206ENST00000399042 MYCNOSP40205 109 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 CAMLGP49069 296 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 SYNJ2BPP57105 145 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 RUNX1Q01196 453 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 CD300CQ08708 224 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 KLK9Q2XQG4 91 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 TMEM144Q7Z5S9 345 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 HAPLN4Q86UW8 402 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 TMEM116Q8NCL8 245 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 BPIFCQ8NFQ6 507 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 OR11H4Q8NGC9 324 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 NARS2Q96I59 477 aaKnown RBP6.89□□□□□ -1.31
BRCC3-206ENST00000399042 RAX2Q96IS3 184 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 ATP6V0BQ99437 205 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 ARPC5LQ9BPX5 153 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 NEURL2Q9BR09 285 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 CHRDL1Q9BU40 450 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 PBDC1Q9BVG4 233 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 PFDN2Q9UHV9 154 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 KLK9Q9UKQ9 250 aa6.89□□□□□ -1.31
BRCC3-206ENST00000399042 COL6A5A8TX70 2615 aa6.88□□□□□ -1.31
BRCC3-206ENST00000399042 IGHV3OR16-8A0A075B7F1 116 aa6.88□□□□□ -1.31
BRCC3-206ENST00000399042 BMPR1BO00238 502 aa6.88□□□□□ -1.31
BRCC3-206ENST00000399042 CTSGP08311 255 aa6.88□□□□□ -1.31
BRCC3-206ENST00000399042 ORM2P19652 201 aa6.88□□□□□ -1.31
BRCC3-206ENST00000399042 S100A7P31151 101 aa6.88□□□□□ -1.31
BRCC3-206ENST00000399042 FCGR2BP31994 310 aaPredicted RBP6.88□□□□□ -1.31
BRCC3-206ENST00000399042 SLURP1P55000 103 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 357.2 ms