RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 HOXA4Q00056 320 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-205ENST00000397611 STPG4Q8N801 248 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 RNASE8Q8TDE3 154 aaKnown RBP4.52□□□□□ -1.69
PTPRD-205ENST00000397611 HARBI1Q96MB7 349 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 A0A1W2PRE2 83 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 C17orf98A8MV24 154 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 IL18BPO95998 194 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 FOXC1Q12948 553 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 ZNF726P1Q15940 193 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 RASL11AQ6T310 242 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 RASL11BQ9BPW5 248 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 MCRIP2Q9BUT9 160 aaKnown RBP4.52□□□□□ -1.69
PTPRD-205ENST00000397611 SAA2-SAA4A0A096LPE2 208 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 GATA4P43694 442 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 GNG5P63218 68 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 PRELID3AQ96N28 172 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 KLK15Q9H2R5 256 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 TCF19Q9Y242 345 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 MLNRO43193 412 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 C2orf83Q53S99 150 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 ZNF826PQ6ZT77 177 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 MOGAT3Q86VF5 341 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 MAP1LC3AQ9H492 121 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 RPP21Q9H633 154 aaKnown RBP4.51□□□□□ -1.69
PTPRD-205ENST00000397611 ACACBO00763 2458 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 TRAV17A0A0B4J275 112 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 F2RL2O00254 374 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 GOSR1O95249 250 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 GPX1P07203 203 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 HSPE1P61604 102 aaKnown RBP4.51□□□□□ -1.69
PTPRD-205ENST00000397611 TIMM23BQ5SRD1 257 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 TCF24Q7RTU0 167 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 OR4X2Q8NGF9 303 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 FOXC2Q99958 501 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 TTTY12Q9BZ98 90 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 PKDREJQ9NTG1 2253 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 THADAQ6YHU6 1953 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 LOC105371242A0A075B767 164 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 PPIAL4CA0A0B4J2A2 164 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 HIGD1CA8MV81 97 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 PPIAL4GP0DN37 164 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 VDAC2P45880 294 aaPredicted RBP4.51□□□□□ -1.69
PTPRD-205ENST00000397611 LGALS4P56470 323 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 LEAP2Q969E1 77 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 FSCN3Q9NQT6 498 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 OSTCQ9NRP0 149 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 PRRG2O14669 202 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 NDUFB3O43676 98 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 CELA2AP08217 269 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 CDKN1BP46527 198 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 SEC11AP67812 179 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 FOXF2Q12947 444 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 SPATA31B1PQ5VZV4 182 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 C5orf24Q7Z6I8 188 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 C10orf126Q8N4M7 172 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 TEX29Q8N6K0 151 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 CT55Q8WUE5 264 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 MRPS16Q9Y3D3 137 aaKnown RBP4.51□□□□□ -1.69
PTPRD-205ENST00000397611 IGHV3-48P01763 117 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 SPTBN1Q01082 2364 aaKnown RBP4.51□□□□□ -1.69
PTPRD-205ENST00000397611 CCL25O15444 150 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 IGKV1D-33P01593 117 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 IGKV1-33P01594 117 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 CCL11P51671 97 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 PSMG4Q5JS54 123 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 FAM231DQ6ZW35 169 aa4.51□□□□□ -1.69
PTPRD-205ENST00000397611 FAM231BA6NCW3 169 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 PEX7O00628 323 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 MOSP00540 346 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 IGLC2P0DOY2 106 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 IGLC3P0DOY3 106 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 COX7A1P24310 79 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 DUTP33316 252 aaKnown RBP4.5□□□□□ -1.69
PTPRD-205ENST00000397611 RPL30P62888 115 aaKnown RBP4.5□□□□□ -1.69
PTPRD-205ENST00000397611 CACNG7P62955 275 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 HSD52Q0P140 79 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 GUSBP1Q15486 140 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 RPL39P5Q59GN2 51 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 ZNF479Q96JC4 524 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 EXPH5Q8NEV8 1989 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 IGLV1-44P01699 117 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 HCP5Q6MZN7 132 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 MDP1Q86V88 176 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 VSTM2AQ8TAG5 236 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 CENPFP49454 3210 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 GFRA3O60609 400 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 ZNF83P51522 516 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 PRR20EP86478 221 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 PRR20CP86479 221 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 PRR20DP86480 221 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 PRR20BP86481 221 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 PRR20AP86496 221 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 ZNF581Q9P0T4 197 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 A0A1W2PS18 150 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 Q0VFX4 171 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 TRIP6Q15654 476 aaKnown RBP4.5□□□□□ -1.69
PTPRD-205ENST00000397611 GOLT1AQ6ZVE7 132 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 OR1L8Q8NGR8 309 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 TMUB1Q9BVT8 246 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 KBTBD11-OT1A0A1B0GTJ5 212 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms