RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 Q8WTZ3 238 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 RNF2Q99496 336 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 ZFAND3Q9H8U3 227 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 EDA2RQ9HAV5 297 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 TP53TG1Q9Y2A0 90 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 IGHV3OR16-8A0A075B7F1 116 aa10.39□□□□□ -0.75
SEC13-204ENST00000397099 DFFBO76075 338 aa10.39□□□□□ -0.75
SEC13-204ENST00000397099 FAM90A2PQ658T7 463 aa10.39□□□□□ -0.75
SEC13-204ENST00000397099 Q6ZWC4 215 aa10.39□□□□□ -0.75
SEC13-204ENST00000397099 GRAMD2BQ96HH9 432 aa10.39□□□□□ -0.75
SEC13-204ENST00000397099 CIB3Q96Q77 187 aaPredicted RBP10.39□□□□□ -0.75
SEC13-204ENST00000397099 WFDC10AQ9H1F0 79 aa10.39□□□□□ -0.75
SEC13-204ENST00000397099 PFDN2Q9UHV9 154 aa10.39□□□□□ -0.75
SEC13-204ENST00000397099 RYR3Q15413 4870 aa10.39□□□□□ -0.75
SEC13-204ENST00000397099 SFT2D2O95562 160 aa10.38□□□□□ -0.75
SEC13-204ENST00000397099 FABP1P07148 127 aa10.38□□□□□ -0.75
SEC13-204ENST00000397099 CRYBB3P26998 211 aa10.38□□□□□ -0.75
SEC13-204ENST00000397099 OR10J1P30954 320 aa10.38□□□□□ -0.75
SEC13-204ENST00000397099 GPX4P36969 197 aaPredicted RBP10.38□□□□□ -0.75
SEC13-204ENST00000397099 NUP62P37198 522 aaPredicted RBP10.38□□□□□ -0.75
SEC13-204ENST00000397099 RAB11AP62491 216 aa10.38□□□□□ -0.75
SEC13-204ENST00000397099 PRSS54Q6PEW0 395 aa10.38□□□□□ -0.75
SEC13-204ENST00000397099 TCF24Q7RTU0 167 aa10.38□□□□□ -0.75
SEC13-204ENST00000397099 ZNF414Q96IQ9 312 aa10.38□□□□□ -0.75
SEC13-204ENST00000397099 SELENOKQ9Y6D0 94 aa10.38□□□□□ -0.75
SEC13-204ENST00000397099 DNASE2O00115 360 aaPredicted RBP10.37□□□□□ -0.75
SEC13-204ENST00000397099 PITX3O75364 302 aa10.37□□□□□ -0.75
SEC13-204ENST00000397099 IGKV1-17P01599 117 aa10.37□□□□□ -0.75
SEC13-204ENST00000397099 IFNA4P05014 189 aa10.37□□□□□ -0.75
SEC13-204ENST00000397099 IGLC1P0CG04 106 aa10.37□□□□□ -0.75
SEC13-204ENST00000397099 RND2P52198 227 aa10.37□□□□□ -0.75
SEC13-204ENST00000397099 AP2S1P53680 142 aaPredicted RBP10.37□□□□□ -0.75
SEC13-204ENST00000397099 PPP1R1AQ13522 171 aa10.37□□□□□ -0.75
SEC13-204ENST00000397099 ODF3L2Q3SX64 289 aa10.37□□□□□ -0.75
SEC13-204ENST00000397099 LINC00299Q6ZSB3 139 aa10.37□□□□□ -0.75
SEC13-204ENST00000397099 STPG3Q8N7X2 389 aa10.37□□□□□ -0.75
SEC13-204ENST00000397099 RBKSQ9H477 322 aa10.37□□□□□ -0.75
SEC13-204ENST00000397099 RETNQ9HD89 108 aa10.37□□□□□ -0.75
SEC13-204ENST00000397099 HELTA6NFD8 242 aa10.36□□□□□ -0.75
SEC13-204ENST00000397099 NDUFB6O95139 128 aa10.36□□□□□ -0.75
SEC13-204ENST00000397099 RPL11P62913 178 aaKnown RBP10.36□□□□□ -0.75
SEC13-204ENST00000397099 WFDC3Q8IUB2 231 aa10.36□□□□□ -0.75
SEC13-204ENST00000397099 COQ8AQ8NI60 647 aa10.36□□□□□ -0.75
SEC13-204ENST00000397099 ST8SIA2Q92186 375 aa10.36□□□□□ -0.75
SEC13-204ENST00000397099 PRR13Q9NZ81 148 aa10.36□□□□□ -0.75
SEC13-204ENST00000397099 TOMM40O96008 361 aa10.35□□□□□ -0.75
SEC13-204ENST00000397099 HNRNPCP07910 306 aaKnown RBP eCLIP10.35□□□□□ -0.75
SEC13-204ENST00000397099 RD3LP0DJH9 198 aa10.35□□□□□ -0.75
SEC13-204ENST00000397099 BAK1Q16611 211 aa10.35□□□□□ -0.75
SEC13-204ENST00000397099 MLANAQ16655 118 aa10.35□□□□□ -0.75
SEC13-204ENST00000397099 TIGITQ495A1 244 aa10.35□□□□□ -0.75
SEC13-204ENST00000397099 TMEM170AQ8WVE7 144 aa10.35□□□□□ -0.75
SEC13-204ENST00000397099 NPIPB3Q92617 1050 aa10.35□□□□□ -0.75
SEC13-204ENST00000397099 SLC35E1Q96K37 410 aa10.35□□□□□ -0.75
SEC13-204ENST00000397099 MS4A6AQ9H2W1 248 aa10.35□□□□□ -0.75
SEC13-204ENST00000397099 MRPL36Q9P0J6 103 aaKnown RBP10.35□□□□□ -0.75
SEC13-204ENST00000397099 UBQLN2Q9UHD9 624 aa10.35□□□□□ -0.75
SEC13-204ENST00000397099 IGHV3-49A0A0A0MS15 119 aa10.34□□□□□ -0.75
SEC13-204ENST00000397099 C9orf170A2RU37 121 aa10.34□□□□□ -0.75
SEC13-204ENST00000397099 NXPH3O95157 252 aa10.34□□□□□ -0.75
SEC13-204ENST00000397099 CFDP00746 253 aaPredicted RBP10.34□□□□□ -0.75
SEC13-204ENST00000397099 IFNA21P01568 189 aa10.34□□□□□ -0.75
SEC13-204ENST00000397099 P2RY1P47900 373 aa10.34□□□□□ -0.75
SEC13-204ENST00000397099 ACY3Q96HD9 319 aa10.34□□□□□ -0.75
SEC13-204ENST00000397099 LYSTQ99698 3801 aa10.34□□□□□ -0.75
SEC13-204ENST00000397099 SEPSECSQ9HD40 501 aaKnown RBP10.34□□□□□ -0.75
SEC13-204ENST00000397099 IGHV3OR16-13A0A075B7E8 117 aa10.33□□□□□ -0.76
SEC13-204ENST00000397099 IGHV3-74A0A0B4J1X5 117 aa10.33□□□□□ -0.76
SEC13-204ENST00000397099 SYNGR2O43760 224 aa10.33□□□□□ -0.76
SEC13-204ENST00000397099 APOHP02749 345 aaPredicted RBP10.33□□□□□ -0.76
SEC13-204ENST00000397099 IL7P13232 177 aa10.33□□□□□ -0.76
SEC13-204ENST00000397099 ATF4P18848 351 aaPredicted RBP10.33□□□□□ -0.76
SEC13-204ENST00000397099 S100A7P31151 101 aa10.33□□□□□ -0.76
SEC13-204ENST00000397099 OR8G2PQ6IF36 304 aa10.33□□□□□ -0.76
SEC13-204ENST00000397099 OR51G1Q8NGK1 321 aa10.33□□□□□ -0.76
SEC13-204ENST00000397099 GATAD1Q8WUU5 269 aa10.33□□□□□ -0.76
SEC13-204ENST00000397099 OVOL2Q9BRP0 275 aa10.33□□□□□ -0.76
SEC13-204ENST00000397099 MAP6D1Q9H9H5 199 aa10.33□□□□□ -0.76
SEC13-204ENST00000397099 RABAC1Q9UI14 185 aa10.33□□□□□ -0.76
SEC13-204ENST00000397099 U3KQE9 123 aa10.33□□□□□ -0.76
SEC13-204ENST00000397099 IGKV3-7A0A075B6H7 116 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 LCE6AA0A183 80 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 ZFP92A6NM28 416 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 SPRY2O43597 315 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 IL4P05112 153 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 HOXB5P09067 269 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 OR4E1P0C645 316 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 TFPI2P48307 235 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 TMEM41BQ5BJD5 291 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 GGNBP1Q5YKI7 109 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 LYG2Q86SG7 212 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 GBGT1Q8N5D6 347 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 TMEM217Q8N7C4 229 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 CCDC32Q9BV29 185 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
SEC13-204ENST00000397099 MPTX1A8MV57 137 aa10.31□□□□□ -0.76
SEC13-204ENST00000397099 PSG1P11464 419 aa10.31□□□□□ -0.76
SEC13-204ENST00000397099 DHRS2Q13268 280 aa10.31□□□□□ -0.76
SEC13-204ENST00000397099 GAMTQ14353 236 aa10.31□□□□□ -0.76
SEC13-204ENST00000397099 C4orf46Q504U0 113 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms