RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CEP250Q9BV73 2442 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 ASH1LQ9NR48 2969 aaKnown RBP11.23□□□□□ -0.61
NUP98-204ENST00000397004 ZFHX3Q15911 3703 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 IGHV1-46P01743 117 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 PRB4P10163 310 aaPredicted RBP11.23□□□□□ -0.61
NUP98-204ENST00000397004 CCL3L1P16619 93 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 PRR27Q6MZM9 219 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 RNASE8Q8TDE3 154 aaKnown RBP11.23□□□□□ -0.61
NUP98-204ENST00000397004 FOXE3Q13461 319 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 ZNF788Q6ZQV5 615 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 HIGD1CA8MV81 97 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 TBR1Q16650 682 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 NPIPB3Q92617 1050 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 A0A1B0GXF2 115 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 C22orf46C9J442 243 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 H0YJW9 148 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 CRYABP02511 175 aaKnown RBP11.22□□□□□ -0.61
NUP98-204ENST00000397004 TCF24Q7RTU0 167 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 OR8B3Q8NGG8 313 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 PPP1R35Q8TAP8 253 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 GTSF1Q8WW33 167 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 CORO2AQ92828 525 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 OR8B2Q96RD0 313 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 BET1LQ9NYM9 111 aa11.22□□□□□ -0.61
NUP98-204ENST00000397004 EP300Q09472 2414 aaPredicted RBP11.21□□□□□ -0.61
NUP98-204ENST00000397004 CAMPP49913 170 aa11.21□□□□□ -0.61
NUP98-204ENST00000397004 KLF3P57682 345 aaPredicted RBP11.21□□□□□ -0.61
NUP98-204ENST00000397004 Q56UQ5 140 aa11.21□□□□□ -0.61
NUP98-204ENST00000397004 ZNF833PQ6ZTB9 187 aa11.21□□□□□ -0.61
NUP98-204ENST00000397004 PPP1R14DQ9NXH3 145 aa11.21□□□□□ -0.61
NUP98-204ENST00000397004 GATA4P43694 442 aa11.21□□□□□ -0.61
NUP98-204ENST00000397004 TXN2Q99757 166 aa11.21□□□□□ -0.61
NUP98-204ENST00000397004 NCOR1P1Q9H4R4 102 aa11.21□□□□□ -0.61
NUP98-204ENST00000397004 MRPL27Q9P0M9 148 aaKnown RBP11.21□□□□□ -0.61
NUP98-204ENST00000397004 PEX7O00628 323 aa11.21□□□□□ -0.62
NUP98-204ENST00000397004 IGFL2Q6UWQ7 119 aa11.21□□□□□ -0.62
NUP98-204ENST00000397004 ST6GALNAC6Q969X2 333 aa11.21□□□□□ -0.62
NUP98-204ENST00000397004 H3BTX0 84 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 IGLV2-23P01705 113 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 KLF5Q13887 457 aaPredicted RBP11.2□□□□□ -0.62
NUP98-204ENST00000397004 FAM231DQ6ZW35 169 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 PROCRQ9UNN8 238 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 FAM215AQ9Y5M1 114 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 HNRNPA3P51991 378 aaKnown RBP11.2□□□□□ -0.62
NUP98-204ENST00000397004 OR5B3Q8NH48 314 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 ZNF714Q96N38 554 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 MCRIP2Q9BUT9 160 aaKnown RBP11.2□□□□□ -0.62
NUP98-204ENST00000397004 ZNF785A8K8V0 405 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 GLRXP35754 106 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 TCF15Q12870 199 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 ERASQ7Z444 233 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 COMMD5Q9GZQ3 224 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 PKDREJQ9NTG1 2253 aa11.2□□□□□ -0.62
NUP98-204ENST00000397004 LOC105371242A0A075B767 164 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 DLX1P56177 255 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 ADTRPQ96IZ2 230 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 HARBI1Q96MB7 349 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 PAXXQ9BUH6 204 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 MLST8Q9BVC4 326 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 RNF7Q9UBF6 113 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 MAP1BP46821 2468 aaKnown RBP11.19□□□□□ -0.62
NUP98-204ENST00000397004 IGHV2-26A0A0B4J1V2 119 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 FOXA3P55318 350 aaPredicted RBP11.19□□□□□ -0.62
NUP98-204ENST00000397004 TAS2R45P59539 299 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 FAM169BQ8N8A8 192 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 OR5AN1Q8NGI8 311 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 ZNF331Q9NQX6 463 aaPredicted RBP11.19□□□□□ -0.62
NUP98-204ENST00000397004 OR2J3O76001 311 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 LEMD1Q68G75 181 aa11.19□□□□□ -0.62
NUP98-204ENST00000397004 MOSP00540 346 aa11.18□□□□□ -0.62
NUP98-204ENST00000397004 GRAMD2BQ96HH9 432 aa11.18□□□□□ -0.62
NUP98-204ENST00000397004 C19orf24Q9BVV8 132 aa11.18□□□□□ -0.62
NUP98-204ENST00000397004 GSX1Q9H4S2 264 aaPredicted RBP11.18□□□□□ -0.62
NUP98-204ENST00000397004 CNOT1A5YKK6 2376 aaKnown RBP11.18□□□□□ -0.62
NUP98-204ENST00000397004 APELAP0DMC3 54 aa11.18□□□□□ -0.62
NUP98-204ENST00000397004 CCL8P80075 99 aa11.18□□□□□ -0.62
NUP98-204ENST00000397004 RNASEKQ6P5S7 137 aaKnown RBP11.18□□□□□ -0.62
NUP98-204ENST00000397004 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
NUP98-204ENST00000397004 MRPL32Q9BYC8 188 aaKnown RBP11.18□□□□□ -0.62
NUP98-204ENST00000397004 ZNF430Q9H8G1 570 aaPredicted RBP11.18□□□□□ -0.62
NUP98-204ENST00000397004 M0R2Z0 102 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 DLL1O00548 723 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 RBX1P62877 108 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 TNFAIP6P98066 277 aaPredicted RBP11.17□□□□□ -0.62
NUP98-204ENST00000397004 MZT1Q08AG7 82 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 RTL8BQ17RB0 113 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 C10orf113Q5VZT2 155 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 MBD3L4A6NDZ8 208 aaPredicted RBP11.17□□□□□ -0.62
NUP98-204ENST00000397004 MBD3L3A6NE82 208 aaPredicted RBP11.17□□□□□ -0.62
NUP98-204ENST00000397004 MBD3L5A6NJ08 208 aaPredicted RBP11.17□□□□□ -0.62
NUP98-204ENST00000397004 ZNF138P52744 262 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 PRB3Q04118 309 aaPredicted RBP11.17□□□□□ -0.62
NUP98-204ENST00000397004 FAM27E3Q08E93 113 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 SSX8Q7RTT4 187 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 PRSS33Q8NF86 280 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 OR2D3Q8NGH3 330 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 MBD3L2Q8NHZ7 208 aaPredicted RBP11.17□□□□□ -0.62
NUP98-204ENST00000397004 BLNKQ8WV28 456 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 ASCL2Q99929 193 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 TRAV9-2A0A087WT02 112 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms