RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TMEM86BQ8N661 226 aa9.92□□□□□ -0.82
TRIM39-204ENST00000396548 SMR3AQ99954 134 aa9.92□□□□□ -0.82
TRIM39-204ENST00000396548 GSX1Q9H4S2 264 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-204ENST00000396548 YAE1D1Q9NRH1 226 aa9.92□□□□□ -0.82
TRIM39-204ENST00000396548 CTXND1A0A1B0GTU2 59 aa9.92□□□□□ -0.82
TRIM39-204ENST00000396548 IGKV1-17P01599 117 aa9.92□□□□□ -0.82
TRIM39-204ENST00000396548 UQCC3Q6UW78 93 aa9.92□□□□□ -0.82
TRIM39-204ENST00000396548 VN1R17PQ8TDU5 208 aa9.92□□□□□ -0.82
TRIM39-204ENST00000396548 BTBD17A6NE02 478 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 IGLV1-40P01703 118 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 PATE2Q6UY27 113 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 Q8N2B8 174 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 SFT2D1Q8WV19 159 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 TMEM37Q8WXS4 190 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 RAB24Q969Q5 203 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 TNFRSF19Q9NS68 423 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 OR2J3O76001 311 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 PLP1P60201 277 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 NOL4LQ96MY1 436 aaPredicted RBP9.91□□□□□ -0.82
TRIM39-204ENST00000396548 ACTR3CQ9C0K3 210 aaPredicted RBP9.91□□□□□ -0.82
TRIM39-204ENST00000396548 ZNF702PQ9H963 129 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 SEPSECSQ9HD40 501 aaKnown RBP9.91□□□□□ -0.82
TRIM39-204ENST00000396548 FBXL7Q9UJT9 491 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 CYB5BO43169 146 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 EIF3GO75821 320 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRIM39-204ENST00000396548 SELENOTP62341 195 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 DEFA5Q01523 94 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 FAM122CQ6P4D5 195 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 ZNF502Q8TBZ5 544 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 SLC25A22Q9H936 323 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 LINC00527Q9UJ94 153 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 MYO9AB2RTY4 2548 aa9.91□□□□□ -0.82
TRIM39-204ENST00000396548 OR5G3P0C626 314 aa9.9□□□□□ -0.82
TRIM39-204ENST00000396548 SPATA31B1PQ5VZV4 182 aa9.9□□□□□ -0.82
TRIM39-204ENST00000396548 TXN2Q99757 166 aa9.9□□□□□ -0.82
TRIM39-204ENST00000396548 THYN1Q9P016 225 aa9.9□□□□□ -0.82
TRIM39-204ENST00000396548 MAP1LC3B2A6NCE7 125 aa9.9□□□□□ -0.82
TRIM39-204ENST00000396548 ZFP92A6NM28 416 aa9.9□□□□□ -0.82
TRIM39-204ENST00000396548 C9JQL5 133 aa9.9□□□□□ -0.82
TRIM39-204ENST00000396548 H3BUA1 57 aa9.9□□□□□ -0.82
TRIM39-204ENST00000396548 LY6G6DO95868 133 aa9.9□□□□□ -0.82
TRIM39-204ENST00000396548 CDC34P49427 236 aaPredicted RBP9.9□□□□□ -0.82
TRIM39-204ENST00000396548 NECAP1Q8NC96 275 aa9.9□□□□□ -0.82
TRIM39-204ENST00000396548 C19orf24Q9BVV8 132 aa9.9□□□□□ -0.82
TRIM39-204ENST00000396548 MAP1LC3BQ9GZQ8 125 aa9.9□□□□□ -0.82
TRIM39-204ENST00000396548 AP4M1O00189 453 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 HBE1P02100 147 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 STAG3L2P0CL84 134 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 STAG3L3P0CL85 134 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 FGF8P55075 233 aaPredicted RBP9.89□□□□□ -0.83
TRIM39-204ENST00000396548 RHOGP84095 191 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 TIGITQ495A1 244 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 C9orf152Q5JTZ5 239 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 LCN15Q6UWW0 184 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 C21orf62Q9NYP8 219 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 MFAP4P55083 255 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 TOR2AQ5JU69 321 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 ESM1Q9NQ30 184 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 S4R3C0 116 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 CTSGP08311 255 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 C15orf32Q32M92 178 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 CCDC140Q96MF4 163 aa9.89□□□□□ -0.83
TRIM39-204ENST00000396548 A0A1B0GV50 99 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 PSG1P11464 419 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 YPEL3P61236 119 aaPredicted RBP9.88□□□□□ -0.83
TRIM39-204ENST00000396548 GUK1Q16774 197 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 FUT9Q9Y231 359 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 WI2-2373I1.2A0A1W2PRP0 233 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 FAM223BA6NKX1 122 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 TOMM40O96008 361 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 SRP14P37108 136 aaKnown RBP9.88□□□□□ -0.83
TRIM39-204ENST00000396548 TMEM95Q3KNT9 176 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 MORN5Q5VZ52 161 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 MIR17HGQ75NE6 70 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 FAM223AQ8IWN6 122 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 ZNF503Q96F45 646 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 LINC00052Q96N35 136 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 ATP6V0BQ99437 205 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 RARRES2Q99969 163 aa9.88□□□□□ -0.83
TRIM39-204ENST00000396548 TRAV30A0A087WSZ9 112 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 HMGB3O15347 200 aaKnown RBP9.87□□□□□ -0.83
TRIM39-204ENST00000396548 ADMP35318 185 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 RHOBP62745 196 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 C10orf91Q5T1B1 145 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 GATAD1Q8WUU5 269 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 FAM167A-AS1Q96KT0 104 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 TMPRSS5Q9H3S3 457 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 DNAJC4Q9NNZ3 241 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 RBFOX3A6NFN3 312 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 DNAJC9-AS1A6NH13 148 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 CLDN34H7C241 214 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 NPBWR1P48145 328 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 ICAM4Q14773 271 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 ZNF506Q5JVG8 444 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 TMEM231Q9H6L2 316 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 MRPL27Q9P0M9 148 aaKnown RBP9.87□□□□□ -0.83
TRIM39-204ENST00000396548 IGHV3-23P01764 117 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 IGHG4P01861 327 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 ADCYAP1P18509 176 aa9.87□□□□□ -0.83
TRIM39-204ENST00000396548 KIAA0141Q14154 515 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms