RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 FCGR2BP31994 310 aaPredicted RBP12.58□□□□□ -0.4
CXCL1-201ENST00000395761 OPRK1P41145 380 aa12.58□□□□□ -0.4
CXCL1-201ENST00000395761 SPANXN5Q5MJ07 72 aa12.58□□□□□ -0.4
CXCL1-201ENST00000395761 SPSB3Q6PJ21 355 aa12.58□□□□□ -0.4
CXCL1-201ENST00000395761 REC114Q7Z4M0 266 aa12.58□□□□□ -0.4
CXCL1-201ENST00000395761 TXN2Q99757 166 aa12.58□□□□□ -0.4
CXCL1-201ENST00000395761 LYRM2Q9NU23 88 aaPredicted RBP12.58□□□□□ -0.4
CXCL1-201ENST00000395761 MBD2Q9UBB5 411 aa12.58□□□□□ -0.4
CXCL1-201ENST00000395761 PEMTQ9UBM1 199 aa12.58□□□□□ -0.4
CXCL1-201ENST00000395761 C2orf70A6NJV1 201 aa12.57□□□□□ -0.4
CXCL1-201ENST00000395761 IGLV1-51P01701 117 aa12.57□□□□□ -0.4
CXCL1-201ENST00000395761 RAB11AP62491 216 aa12.57□□□□□ -0.4
CXCL1-201ENST00000395761 TM4SF20Q53R12 229 aa12.57□□□□□ -0.4
CXCL1-201ENST00000395761 TMEM252Q8N6L7 170 aa12.57□□□□□ -0.4
CXCL1-201ENST00000395761 RNASEH2CQ8TDP1 164 aaKnown RBP12.57□□□□□ -0.4
CXCL1-201ENST00000395761 PRR25Q96S07 402 aa12.57□□□□□ -0.4
CXCL1-201ENST00000395761 IGHV3OR16-8A0A075B7F1 116 aa12.56□□□□□ -0.4
CXCL1-201ENST00000395761 TMEM213A2RRL7 107 aa12.56□□□□□ -0.4
CXCL1-201ENST00000395761 FAM24AA6NFZ4 105 aa12.56□□□□□ -0.4
CXCL1-201ENST00000395761 PMS2P5A8MQ11 134 aa12.56□□□□□ -0.4
CXCL1-201ENST00000395761 K7EIL1 84 aa12.56□□□□□ -0.4
CXCL1-201ENST00000395761 SCAF4O95104 1147 aaKnown RBP12.56□□□□□ -0.4
CXCL1-201ENST00000395761 FOLR2P14207 255 aa12.56□□□□□ -0.4
CXCL1-201ENST00000395761 CACNG8Q8WXS5 425 aa12.56□□□□□ -0.4
CXCL1-201ENST00000395761 SLC25A31Q9H0C2 315 aa12.56□□□□□ -0.4
CXCL1-201ENST00000395761 GAR1Q9NY12 217 aaKnown RBP12.56□□□□□ -0.4
CXCL1-201ENST00000395761 ZNF256Q9Y2P7 627 aaPredicted RBP12.56□□□□□ -0.4
CXCL1-201ENST00000395761 SELENOKQ9Y6D0 94 aa12.56□□□□□ -0.4
CXCL1-201ENST00000395761 A8MWP6 167 aa12.55□□□□□ -0.4
CXCL1-201ENST00000395761 H3BP45 60 aa12.55□□□□□ -0.4
CXCL1-201ENST00000395761 SMLR1H3BR10 107 aa12.55□□□□□ -0.4
CXCL1-201ENST00000395761 NUPL2O15504 423 aaKnown RBP12.55□□□□□ -0.4
CXCL1-201ENST00000395761 GNG7O60262 68 aa12.55□□□□□ -0.4
CXCL1-201ENST00000395761 NPBWR1P48145 328 aa12.55□□□□□ -0.4
CXCL1-201ENST00000395761 CAV2P51636 162 aa12.55□□□□□ -0.4
CXCL1-201ENST00000395761 OR4X1Q8NH49 305 aa12.55□□□□□ -0.4
CXCL1-201ENST00000395761 TMEM190Q8WZ59 177 aa12.55□□□□□ -0.4
CXCL1-201ENST00000395761 SIGLEC8Q9NYZ4 499 aa12.55□□□□□ -0.4
CXCL1-201ENST00000395761 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
CXCL1-201ENST00000395761 HMSDA8MTL9 139 aa12.54□□□□□ -0.4
CXCL1-201ENST00000395761 PRSS46E5RG02 174 aa12.54□□□□□ -0.4
CXCL1-201ENST00000395761 NDUFA4O00483 81 aa12.54□□□□□ -0.4
CXCL1-201ENST00000395761 CLN5O75503 358 aa12.54□□□□□ -0.4
CXCL1-201ENST00000395761 C1QBP02746 253 aa12.54□□□□□ -0.4
CXCL1-201ENST00000395761 IFNA4P05014 189 aa12.54□□□□□ -0.4
CXCL1-201ENST00000395761 CBLN1P23435 193 aa12.54□□□□□ -0.4
CXCL1-201ENST00000395761 GPX4P36969 197 aaPredicted RBP12.54□□□□□ -0.4
CXCL1-201ENST00000395761 ZNF546Q86UE3 836 aa12.54□□□□□ -0.4
CXCL1-201ENST00000395761 OR11H4Q8NGC9 324 aa12.54□□□□□ -0.4
CXCL1-201ENST00000395761 TNFSF18Q9UNG2 199 aa12.54□□□□□ -0.4
CXCL1-201ENST00000395761 RPS10-NUDT3A0A1W2PQS6 291 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 IGSF23A1L1A6 192 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 IZUMO1RA6ND01 250 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 ZNF207O43670 478 aaKnown RBP12.53□□□□□ -0.4
CXCL1-201ENST00000395761 METTL15P1P0C7V9 234 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 RPL12P30050 165 aaKnown RBP12.53□□□□□ -0.4
CXCL1-201ENST00000395761 SULT1A1P50225 295 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 RND2P52198 227 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 CD69Q07108 199 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 BAXQ07812 192 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 CD300CQ08708 224 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 OR10P1Q8NGE3 313 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 MRAPQ8TCY5 172 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 AQP10Q96PS8 301 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 C20orf24Q9BUV8 137 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 PAIP2BQ9ULR5 123 aaKnown RBP12.53□□□□□ -0.4
CXCL1-201ENST00000395761 UFC1Q9Y3C8 167 aa12.53□□□□□ -0.4
CXCL1-201ENST00000395761 FXYD6-FXYD2A0A087WZ82 144 aa12.52□□□□□ -0.41
CXCL1-201ENST00000395761 PFDN1O60925 122 aa12.52□□□□□ -0.41
CXCL1-201ENST00000395761 YIF1AO95070 293 aa12.52□□□□□ -0.41
CXCL1-201ENST00000395761 C8orf88P0DMB2 117 aa12.52□□□□□ -0.41
CXCL1-201ENST00000395761 ELLP55199 621 aaPredicted RBP12.52□□□□□ -0.41
CXCL1-201ENST00000395761 EWSR1Q01844 656 aaKnown RBP eCLIP12.52□□□□□ -0.41
CXCL1-201ENST00000395761 RELQ04864 619 aaPredicted RBP12.52□□□□□ -0.41
CXCL1-201ENST00000395761 DEFB114Q30KQ6 69 aa12.52□□□□□ -0.41
CXCL1-201ENST00000395761 TIGITQ495A1 244 aa12.52□□□□□ -0.41
CXCL1-201ENST00000395761 CD300EQ496F6 205 aaPredicted RBP12.52□□□□□ -0.41
CXCL1-201ENST00000395761 ETFRF1Q6IPR1 90 aa12.52□□□□□ -0.41
CXCL1-201ENST00000395761 SLC16A13Q7RTY0 426 aa12.52□□□□□ -0.41
CXCL1-201ENST00000395761 NPIPB3Q92617 1050 aa12.52□□□□□ -0.41
CXCL1-201ENST00000395761 GGACTQ9BVM4 153 aa12.52□□□□□ -0.41
CXCL1-201ENST00000395761 FNDC10F2Z333 226 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 IGKV1-17P01599 117 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 GP9P14770 177 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 S100A11P31949 105 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 NUP62P37198 522 aaPredicted RBP12.51□□□□□ -0.41
CXCL1-201ENST00000395761 DLK1P80370 383 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 NHLH2Q02577 135 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 ARL16Q0P5N6 197 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 TOMM20LQ6UXN7 152 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 STX12Q86Y82 276 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 INO80EQ8NBZ0 244 aaPredicted RBP12.51□□□□□ -0.41
CXCL1-201ENST00000395761 TMEM116Q8NCL8 245 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 DYNLRB2Q8TF09 96 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 ACY3Q96HD9 319 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 HYLS1Q96M11 299 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 MLXQ9UH92 298 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 HSPB11Q9Y547 144 aa12.51□□□□□ -0.41
CXCL1-201ENST00000395761 PRKDCP78527 4128 aaKnown RBP12.51□□□□□ -0.41
CXCL1-201ENST00000395761 RNF222A6NCQ9 220 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms