RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.93□□□□□ -0.82
SCAF11-203ENST00000395453 DEDDO75618 318 aa9.93□□□□□ -0.82
SCAF11-203ENST00000395453 IGKV1-17P01599 117 aa9.93□□□□□ -0.82
SCAF11-203ENST00000395453 NPPCP23582 126 aa9.93□□□□□ -0.82
SCAF11-203ENST00000395453 CRYBB3P26998 211 aa9.93□□□□□ -0.82
SCAF11-203ENST00000395453 OPRK1P41145 380 aa9.93□□□□□ -0.82
SCAF11-203ENST00000395453 HTR2BP41595 481 aa9.93□□□□□ -0.82
SCAF11-203ENST00000395453 IL18Q14116 193 aa9.93□□□□□ -0.82
SCAF11-203ENST00000395453 OR51S1Q8NGJ8 323 aa9.93□□□□□ -0.82
SCAF11-203ENST00000395453 RNASE11Q8TAA1 199 aaKnown RBP9.93□□□□□ -0.82
SCAF11-203ENST00000395453 PRRT1Q99946 306 aa9.93□□□□□ -0.82
SCAF11-203ENST00000395453 C2orf83Q53S99 150 aa9.92□□□□□ -0.82
SCAF11-203ENST00000395453 SLIRPQ9GZT3 109 aaKnown RBP9.92□□□□□ -0.82
SCAF11-203ENST00000395453 TMEM231Q9H6L2 316 aa9.92□□□□□ -0.82
SCAF11-203ENST00000395453 CACNG5Q9UF02 275 aa9.92□□□□□ -0.82
SCAF11-203ENST00000395453 TRAV30A0A087WSZ9 112 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 IGHV3-66A0A0C4DH42 116 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 A0A1W2PS18 150 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 MPTX1A8MV57 137 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 DNASE2O00115 360 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-203ENST00000395453 TNFSF8P32971 234 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 TMEM187Q14656 261 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 NMSQ5H8A3 153 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 TMEM268Q5VZI3 342 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 LGALS9CQ6DKI2 356 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 PRSS54Q6PEW0 395 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 RNASEH2CQ8TDP1 164 aaKnown RBP9.91□□□□□ -0.82
SCAF11-203ENST00000395453 TMEM170AQ8WVE7 144 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 IL22RA2Q969J5 263 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 TMEM230Q96A57 120 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 HEYLQ9NQ87 328 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-203ENST00000395453 CACFD1Q9UGQ2 172 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 RSL24D1Q9UHA3 163 aaKnown RBP9.91□□□□□ -0.82
SCAF11-203ENST00000395453 KCNIP3Q9Y2W7 256 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 U3KQE9 123 aa9.91□□□□□ -0.82
SCAF11-203ENST00000395453 RPS10-NUDT3A0A1W2PQS6 291 aa9.9□□□□□ -0.82
SCAF11-203ENST00000395453 IGLC1P0CG04 106 aa9.9□□□□□ -0.82
SCAF11-203ENST00000395453 SLC25A4P12235 298 aa9.9□□□□□ -0.82
SCAF11-203ENST00000395453 TIGITQ495A1 244 aa9.9□□□□□ -0.82
SCAF11-203ENST00000395453 FAM24BQ8N5W8 94 aa9.9□□□□□ -0.82
SCAF11-203ENST00000395453 TMEM217Q8N7C4 229 aa9.9□□□□□ -0.82
SCAF11-203ENST00000395453 METTL26Q96S19 204 aa9.9□□□□□ -0.82
SCAF11-203ENST00000395453 SCP2D1Q9UJQ7 156 aa9.9□□□□□ -0.82
SCAF11-203ENST00000395453 H3BMQ9 156 aa9.89□□□□□ -0.83
SCAF11-203ENST00000395453 K7EQG2 157 aa9.89□□□□□ -0.83
SCAF11-203ENST00000395453 SCGB2A1O75556 95 aa9.89□□□□□ -0.83
SCAF11-203ENST00000395453 DEFB131AP59861 70 aa9.89□□□□□ -0.83
SCAF11-203ENST00000395453 YPEL3P61236 119 aaPredicted RBP9.89□□□□□ -0.83
SCAF11-203ENST00000395453 RPL11P62913 178 aaKnown RBP9.89□□□□□ -0.83
SCAF11-203ENST00000395453 SUPT4H1P63272 117 aaKnown RBP9.89□□□□□ -0.83
SCAF11-203ENST00000395453 SLC24A4Q8NFF2 622 aa9.89□□□□□ -0.83
SCAF11-203ENST00000395453 OR1S2Q8NGQ3 325 aa9.89□□□□□ -0.83
SCAF11-203ENST00000395453 GRAMD2BQ96HH9 432 aa9.89□□□□□ -0.83
SCAF11-203ENST00000395453 SCGB3A2Q96PL1 93 aa9.89□□□□□ -0.83
SCAF11-203ENST00000395453 RARRES2Q99969 163 aa9.89□□□□□ -0.83
SCAF11-203ENST00000395453 FABP12A6NFH5 140 aa9.88□□□□□ -0.83
SCAF11-203ENST00000395453 CEBPZOSA8MTT3 80 aa9.88□□□□□ -0.83
SCAF11-203ENST00000395453 NXPH3O95157 252 aa9.88□□□□□ -0.83
SCAF11-203ENST00000395453 SULT1A3P0DMM9 295 aa9.88□□□□□ -0.83
SCAF11-203ENST00000395453 SULT1A4P0DMN0 295 aa9.88□□□□□ -0.83
SCAF11-203ENST00000395453 P2RY1P47900 373 aa9.88□□□□□ -0.83
SCAF11-203ENST00000395453 RND2P52198 227 aa9.88□□□□□ -0.83
SCAF11-203ENST00000395453 RBMS2Q15434 407 aaKnown RBP9.88□□□□□ -0.83
SCAF11-203ENST00000395453 DCANP1Q8TF63 244 aa9.88□□□□□ -0.83
SCAF11-203ENST00000395453 HSPB7Q9UBY9 170 aa9.88□□□□□ -0.83
SCAF11-203ENST00000395453 AGRNO00468 2067 aa9.88□□□□□ -0.83
SCAF11-203ENST00000395453 A0A0B4J2A0 478 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 KRTAP9-6A0A140TA67 174 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 GIG44P09565 113 aaPredicted RBP9.87□□□□□ -0.83
SCAF11-203ENST00000395453 NPY1RP25929 384 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 OR10J1P30954 320 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 CCR6P51684 374 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 LEMD1Q68G75 181 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 ETFRF1Q6IPR1 90 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 C16orf54Q6UWD8 224 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 LYZL2Q7Z4W2 148 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 NOXA1Q86UR1 476 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 OR11H2Q8NH07 326 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 Q8WTZ3 238 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 C11orf68Q9H3H3 251 aaKnown RBP9.87□□□□□ -0.83
SCAF11-203ENST00000395453 PRR13Q9NZ81 148 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 SHPKQ9UHJ6 478 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 RABAC1Q9UI14 185 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 U3KQ87 197 aa9.87□□□□□ -0.83
SCAF11-203ENST00000395453 CA1P00915 261 aaPredicted RBP9.86□□□□□ -0.83
SCAF11-203ENST00000395453 AKR1C4P17516 323 aa9.86□□□□□ -0.83
SCAF11-203ENST00000395453 SMCO1Q147U7 214 aa9.86□□□□□ -0.83
SCAF11-203ENST00000395453 TRPT1Q86TN4 253 aaKnown RBP9.86□□□□□ -0.83
SCAF11-203ENST00000395453 STHQ8IWL8 128 aa9.86□□□□□ -0.83
SCAF11-203ENST00000395453 STXBP6Q8NFX7 210 aa9.86□□□□□ -0.83
SCAF11-203ENST00000395453 MCFD2Q8NI22 146 aa9.86□□□□□ -0.83
SCAF11-203ENST00000395453 GLMPQ8WWB7 406 aa9.86□□□□□ -0.83
SCAF11-203ENST00000395453 NPIPB3Q92617 1050 aa9.86□□□□□ -0.83
SCAF11-203ENST00000395453 NARS2Q96I59 477 aaKnown RBP9.86□□□□□ -0.83
SCAF11-203ENST00000395453 MCUBQ9NWR8 336 aa9.86□□□□□ -0.83
SCAF11-203ENST00000395453 HNRNPCP07910 306 aaKnown RBP eCLIP9.85□□□□□ -0.83
SCAF11-203ENST00000395453 ATP5IP56385 69 aaPredicted RBP9.85□□□□□ -0.83
SCAF11-203ENST00000395453 KLF9Q13886 244 aaPredicted RBP9.85□□□□□ -0.83
SCAF11-203ENST00000395453 LGI3Q8N145 548 aa9.85□□□□□ -0.83
SCAF11-203ENST00000395453 PHLDA1Q8WV24 401 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms