RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ALKBH7Q9BT30 221 aaPredicted RBP8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 RPP21Q9H633 154 aaKnown RBP8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 DCAF16Q9NXF7 216 aa8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 FAM186AA6NE01 2351 aa8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 A6NNC1 897 aa8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 HIGD1CA8MV81 97 aa8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 OR5AL1P0C617 328 aa8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 MYCNOSP40205 109 aa8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 LRRC10Q5BKY1 277 aa8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 RNASEKQ6P5S7 137 aaKnown RBP8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 IGF2-ASQ6U949 168 aa8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 IGFL3Q6UXB1 125 aa8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 OR8B3Q8NGG8 313 aa8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 DAZAP1Q96EP5 407 aaKnown RBP8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 OR8B2Q96RD0 313 aa8.13□□□□□ -1.11
UBE2D3-208ENST00000394803 IGHV2-26A0A0B4J1V2 119 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 TRAV5A0A0B4J249 113 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 SIAH2O43255 324 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 NDUFB3O43676 98 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 TOMM40O96008 361 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 CD40P25942 277 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 TSPOP30536 169 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 ZNF137PP52743 207 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 PAX2Q02962 417 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 MMDQ15546 238 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 UTF1Q5T230 341 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 SEM1Q6ZVN7 128 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 NHLRC2Q8NBF2 726 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 TMEM70Q9BUB7 260 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 SSBP3Q9BWW4 388 aaPredicted RBP8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 TNFRSF19Q9NS68 423 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 RNF24Q9Y225 148 aa8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 RAI1Q7Z5J4 1906 aaPredicted RBP8.12□□□□□ -1.11
UBE2D3-208ENST00000394803 A0A1B0GXF2 115 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 P01737 135 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 NPSP0C0P6 89 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 PYYP10082 97 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 TNXAQ16473 311 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 PRR27Q6MZM9 219 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 DUX4L9Q6RFH8 374 aaPredicted RBP8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 FAM19A2Q8N3H0 131 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 TEX45Q8NA69 505 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 TNFRSF14Q92956 283 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 CLEC7AQ9BXN2 247 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 ST20Q9HBF5 79 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 GPR179Q6PRD1 2367 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 PPIAL4EA0A075B759 164 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 HSBP1L1C9JCN9 74 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 PPIAL4DF5H284 164 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 PPIAL4FP0DN26 164 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 REG1BP48304 166 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 PLP1P60201 277 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 WT1-ASQ06250 92 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 MLANAQ16655 118 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 DEFB109BQ30KR1 87 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 PATE2Q6UY27 113 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 ZNF738Q8NE65 137 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 ASCL3Q9NQ33 180 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 RNF114Q9Y508 228 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 PPIAL4AQ9Y536 164 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 DSCAMO60469 2012 aa8.11□□□□□ -1.11
UBE2D3-208ENST00000394803 IGHV1-69-2A0A0G2JMI3 117 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 PGPA6NDG6 321 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 C17orf100A8MU93 164 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 CA1P00915 261 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 CRYGCP07315 174 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 NBEAP1P0C6P0 100 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 PVRIGQ6DKI7 326 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 RBPMS2Q6ZRY4 209 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 FAM168AQ92567 244 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 WNT10AQ9GZT5 417 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 C7orf69Q9H7B7 122 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 ZNF318Q5VUA4 2279 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 IGKV1D-37A0A075B6S9 117 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 CRXO43186 299 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 CEACAM8P31997 349 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 CAMPP49913 170 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 MORN5Q5VZ52 161 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 TMEM200BQ69YZ2 307 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 S100A7AQ86SG5 101 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 C8orf46Q8TAG6 207 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 MLST8Q9BVC4 326 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 PRSS22Q9GZN4 317 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 TMEM191AQ9H0A3 160 aa8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 FNDC4Q9H6D8 234 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-208ENST00000394803 INTS1Q8N201 2190 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 TRAV34A0A0B4J273 112 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 TRBV6-1A0A0K0K1D8 114 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 A0A1B0GW15 77 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 CHEK1O14757 476 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 FSTL3O95633 263 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 LTAP01374 205 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 LIPFP07098 398 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 Q56UQ5 140 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 PIP4P1Q86T03 277 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 TMEM116Q8NCL8 245 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 OR1B1Q8NGR6 318 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 H1FXQ92522 213 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 LINC00479Q96M42 142 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 NDFIP1Q9BT67 221 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms