RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 FAM25CB3EWG5 89 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 FAM25GB3EWG6 89 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 ZNF688P0C7X2 276 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 IGLC1P0CG04 106 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 ZNF182P17025 639 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 C4BPBP20851 252 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 HLA-DMBP28068 263 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 TAS2R19P59542 299 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 SSBP1Q04837 148 aaKnown RBP12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 SP6Q3SY56 376 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 C2orf83Q53S99 150 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 C16orf54Q6UWD8 224 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 Q6ZRM9 215 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 CENPSQ8N2Z9 138 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 OR13C8Q8NGS7 320 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 Q8WTZ3 238 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 AGRNO00468 2067 aa12.65□□□□□ -0.38
SNRPA1-202ENST00000394082 HNRNPCP07910 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNRPA1-202ENST00000394082 SURF2Q15527 256 aaPredicted RBP12.65□□□□□ -0.38
SNRPA1-202ENST00000394082 TIGITQ495A1 244 aa12.65□□□□□ -0.38
SNRPA1-202ENST00000394082 PRSS54Q6PEW0 395 aa12.65□□□□□ -0.38
SNRPA1-202ENST00000394082 RNASE11Q8TAA1 199 aaKnown RBP12.65□□□□□ -0.38
SNRPA1-202ENST00000394082 GLMPQ8WWB7 406 aa12.65□□□□□ -0.38
SNRPA1-202ENST00000394082 BCL7BQ9BQE9 202 aa12.65□□□□□ -0.38
SNRPA1-202ENST00000394082 RNF126Q9BV68 326 aa12.65□□□□□ -0.38
SNRPA1-202ENST00000394082 C1QTNF4Q9BXJ3 329 aa12.65□□□□□ -0.38
SNRPA1-202ENST00000394082 TBC1D24Q9ULP9 559 aa12.65□□□□□ -0.38
SNRPA1-202ENST00000394082 KNCNA6PVL3 124 aa12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 RAB3DO95716 219 aa12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 TMBIM6P55061 237 aa12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 NUTF2P61970 127 aaKnown RBP12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 ACTL10Q5JWF8 245 aa12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 ETFRF1Q6IPR1 90 aa12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 Q6ZTC4 211 aa12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 NOXA1Q86UR1 476 aa12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 OR4D10Q8NGI6 311 aa12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 GLYATL2Q8WU03 294 aa12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 RBPMSQ93062 196 aaKnown RBP12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 RAB40CQ96S21 281 aa12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 EXTL2Q9UBQ6 330 aa12.64□□□□□ -0.39
SNRPA1-202ENST00000394082 ELOA3CA0A087WX78 387 aaPredicted RBP12.63□□□□□ -0.39
SNRPA1-202ENST00000394082 TEX13DA0A0J9YY54 714 aaPredicted RBP12.63□□□□□ -0.39
SNRPA1-202ENST00000394082 OR10J1P30954 320 aa12.63□□□□□ -0.39
SNRPA1-202ENST00000394082 SNRPD3P62318 126 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-202ENST00000394082 MRPS10P82664 201 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-202ENST00000394082 DHODHQ02127 395 aa12.63□□□□□ -0.39
SNRPA1-202ENST00000394082 DHRS2Q13268 280 aa12.63□□□□□ -0.39
SNRPA1-202ENST00000394082 MEF2DQ14814 521 aa12.63□□□□□ -0.39
SNRPA1-202ENST00000394082 STEAP1BQ6NZ63 245 aa12.63□□□□□ -0.39
SNRPA1-202ENST00000394082 LINC00336Q6ZUF6 198 aa12.63□□□□□ -0.39
SNRPA1-202ENST00000394082 MARCH1Q8TCQ1 289 aa12.63□□□□□ -0.39
SNRPA1-202ENST00000394082 HEYLQ9NQ87 328 aaPredicted RBP12.63□□□□□ -0.39
SNRPA1-202ENST00000394082 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
SNRPA1-202ENST00000394082 GABARAPH6UMI1 98 aa12.62□□□□□ -0.39
SNRPA1-202ENST00000394082 GSTZ1O43708 216 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-202ENST00000394082 AMBPP02760 352 aa12.62□□□□□ -0.39
SNRPA1-202ENST00000394082 OR5AC1P0C628 307 aa12.62□□□□□ -0.39
SNRPA1-202ENST00000394082 RND2P52198 227 aa12.62□□□□□ -0.39
SNRPA1-202ENST00000394082 SPCS2Q15005 226 aa12.62□□□□□ -0.39
SNRPA1-202ENST00000394082 SCGB2B2Q4G0G5 96 aa12.62□□□□□ -0.39
SNRPA1-202ENST00000394082 RNASE12Q5GAN4 147 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-202ENST00000394082 SLC24A4Q8NFF2 622 aa12.62□□□□□ -0.39
SNRPA1-202ENST00000394082 RTBDNQ9BSG5 229 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-202ENST00000394082 C14orf166Q9Y224 244 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-202ENST00000394082 BUB3O43684 328 aa12.61□□□□□ -0.39
SNRPA1-202ENST00000394082 PSMG4Q5JS54 123 aa12.61□□□□□ -0.39
SNRPA1-202ENST00000394082 SELENOHQ8IZQ5 122 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-202ENST00000394082 LHFPL5Q8TAF8 219 aa12.61□□□□□ -0.39
SNRPA1-202ENST00000394082 NAA60Q9H7X0 242 aa12.61□□□□□ -0.39
SNRPA1-202ENST00000394082 NRN1Q9NPD7 142 aa12.61□□□□□ -0.39
SNRPA1-202ENST00000394082 TMEM56-RWDD3S4R434 201 aa12.61□□□□□ -0.39
SNRPA1-202ENST00000394082 FAT2Q9NYQ8 4349 aa12.6□□□□□ -0.39
SNRPA1-202ENST00000394082 FAM90A26D6RGX4 464 aa12.6□□□□□ -0.39
SNRPA1-202ENST00000394082 RGS5O15539 181 aa12.6□□□□□ -0.39
SNRPA1-202ENST00000394082 TOMM40O96008 361 aa12.6□□□□□ -0.39
SNRPA1-202ENST00000394082 USF2Q15853 346 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-202ENST00000394082 NMSQ5H8A3 153 aa12.6□□□□□ -0.39
SNRPA1-202ENST00000394082 IL22RA2Q969J5 263 aa12.6□□□□□ -0.39
SNRPA1-202ENST00000394082 GPR146Q96CH1 333 aa12.6□□□□□ -0.39
SNRPA1-202ENST00000394082 NEU1Q99519 415 aa12.6□□□□□ -0.39
SNRPA1-202ENST00000394082 CCDC59Q9P031 241 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-202ENST00000394082 CACNG5Q9UF02 275 aa12.6□□□□□ -0.39
SNRPA1-202ENST00000394082 KIAA1109Q2LD37 5005 aa12.6□□□□□ -0.39
SNRPA1-202ENST00000394082 CCDC160A6NGH7 325 aa12.59□□□□□ -0.39
SNRPA1-202ENST00000394082 CRYM-AS1A6NIL9 109 aa12.59□□□□□ -0.39
SNRPA1-202ENST00000394082 H3BMM0 161 aa12.59□□□□□ -0.39
SNRPA1-202ENST00000394082 IL4P05112 153 aa12.59□□□□□ -0.39
SNRPA1-202ENST00000394082 RD3LP0DJH9 198 aa12.59□□□□□ -0.39
SNRPA1-202ENST00000394082 NUP62P37198 522 aaPredicted RBP12.59□□□□□ -0.39
SNRPA1-202ENST00000394082 ATP5IP56385 69 aaPredicted RBP12.59□□□□□ -0.39
SNRPA1-202ENST00000394082 C12orf74Q32Q52 190 aa12.59□□□□□ -0.39
SNRPA1-202ENST00000394082 TMEM170AQ8WVE7 144 aa12.59□□□□□ -0.39
SNRPA1-202ENST00000394082 CLEC5AQ9NY25 188 aa12.59□□□□□ -0.39
SNRPA1-202ENST00000394082 GPR132Q9UNW8 380 aa12.59□□□□□ -0.39
SNRPA1-202ENST00000394082 U3KQ87 197 aa12.59□□□□□ -0.39
SNRPA1-202ENST00000394082 DEFB131BA0A096LNP1 70 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 CEBPZOSA8MTT3 80 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 DISC1C4P0D8 188 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 H3BMQ9 156 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 P0DMU3 169 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms