RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 FANCD2OSQ96PS1 177 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 TRGV9Q99603 122 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 FOXC2Q99958 501 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 SEC11CQ9BY50 192 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 SLC35B3Q9H1N7 401 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 PDZD2O15018 2839 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 CSMD1Q96PZ7 3565 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 G3V318 75 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 M0QZK8 103 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 COX7A2P2O60397 106 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 CXorf1O96002 111 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 IGHV4-59P01825 116 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 AMY1AP04745 511 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 ARL14EPLP0DKL9 152 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 ADCYAP1P18509 176 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 PSMB3P49720 205 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 TIGITQ495A1 244 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 KHDC3LQ587J8 217 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 MIR17HGQ75NE6 70 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 OR1L4Q8NGR5 311 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 FAM110DQ8TAY7 271 aaPredicted RBP6.8□□□□□ -1.32
TDP1-203ENST00000393454 SMDT1Q9H4I9 107 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 DNAJC4Q9NNZ3 241 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 LINC00527Q9UJ94 153 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 FBXL7Q9UJT9 491 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 FUT9Q9Y231 359 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 BAHCC1Q9P281 2608 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 CLN5O75503 358 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 SCO1O75880 301 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 NDUFB8O95169 186 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 IGHV3-23P01764 117 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 OR5G3P0C626 314 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 HIST1H1BP16401 226 aaKnown RBP6.79□□□□□ -1.32
TDP1-203ENST00000393454 ORM2P19652 201 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 Q56UQ5 140 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 C10orf113Q5VZT2 155 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 SPNS3Q6ZMD2 512 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 OR1B1Q8NGR6 318 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 GATAD1Q8WUU5 269 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 TMEM68Q96MH6 324 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 PFDN5Q99471 154 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 C19orf24Q9BVV8 132 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 VAX2Q9UIW0 290 aa6.79□□□□□ -1.32
TDP1-203ENST00000393454 FLNAP21333 2647 aaKnown RBP6.78□□□□□ -1.32
TDP1-203ENST00000393454 TRAV41A0A0B4J266 112 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 GNG7O60262 68 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 FSHBP01225 129 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 SRP19P09132 144 aaKnown RBP6.78□□□□□ -1.32
TDP1-203ENST00000393454 IGLC1P0CG04 106 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 STAG3L2P0CL84 134 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 STAG3L3P0CL85 134 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 NPBWR1P48145 328 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 MFAP4P55083 255 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 UBE2G2P60604 165 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 BLCAPP62952 87 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 GUCA2BQ16661 112 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 AKIRIN2Q53H80 203 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 SOHLH1Q5JUK2 328 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 C16orf82Q7Z2V1 217 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 TMEM37Q8WXS4 190 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 MS4A10Q96PG2 267 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 RNF2Q99496 336 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 MANBALQ9NQG1 85 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 TECRQ9NZ01 308 aaKnown RBP6.78□□□□□ -1.32
TDP1-203ENST00000393454 PAGE4O60829 102 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 HSPB1P04792 205 aaKnown RBP6.78□□□□□ -1.32
TDP1-203ENST00000393454 FABP1P07148 127 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 RD3LP0DJH9 198 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 IER3P46695 156 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 TAS2R45P59539 299 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 LYZP61626 148 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 RHOGP84095 191 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 C10orf91Q5T1B1 145 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 CST9LP1Q5W188 147 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 IL17RELQ6ZVW7 336 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 SVBPQ8N300 66 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 C21orf62Q9NYP8 219 aa6.78□□□□□ -1.32
TDP1-203ENST00000393454 CARHSP1Q9Y2V2 147 aaKnown RBP6.78□□□□□ -1.32
TDP1-203ENST00000393454 TRAV5A0A0B4J249 113 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 OR7C2O60412 319 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 HYPMO75409 117 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 PSG1P11464 419 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 GCHFRP30047 84 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 TAGLN2P37802 199 aaKnown RBP6.77□□□□□ -1.33
TDP1-203ENST00000393454 PMS2P11Q13670 270 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 PATE2Q6UY27 113 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 C9orf139Q6ZV77 190 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 CYB561D1Q8N8Q1 229 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 OR4F5Q8NH21 305 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 OR5R1Q8NH85 324 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 UHRF2Q96PU4 802 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 OR4F4Q96R69 305 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 MRPL32Q9BYC8 188 aaKnown RBP6.77□□□□□ -1.33
TDP1-203ENST00000393454 TLN2Q9Y4G6 2542 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 TRAV30A0A087WSZ9 112 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 ELOA3CA0A087WX78 387 aaPredicted RBP6.77□□□□□ -1.33
TDP1-203ENST00000393454 PSMB11A5LHX3 300 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 OR2T8A6NH00 312 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 IGHG2P01859 326 aa6.77□□□□□ -1.33
TDP1-203ENST00000393454 C8orf88P0DMB2 117 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms