RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 TNFRSF19Q9NS68 423 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 ZNF355PQ9NSJ1 428 aa7.22□□□□□ -1.25
TDP1-202ENST00000393452 ITPR1Q14643 2758 aa7.21□□□□□ -1.25
TDP1-202ENST00000393452 TRAV5A0A0B4J249 113 aa7.21□□□□□ -1.26
TDP1-202ENST00000393452 S100A9P06702 114 aaKnown RBP7.21□□□□□ -1.26
TDP1-202ENST00000393452 CRYBB3P26998 211 aa7.21□□□□□ -1.26
TDP1-202ENST00000393452 CEACAM3P40198 252 aa7.21□□□□□ -1.26
TDP1-202ENST00000393452 FAM209BQ5JX69 171 aa7.21□□□□□ -1.26
TDP1-202ENST00000393452 C19orf35Q6ZS72 473 aa7.21□□□□□ -1.26
TDP1-202ENST00000393452 KIR3DL3Q8N743 410 aa7.21□□□□□ -1.26
TDP1-202ENST00000393452 NPBQ8NG41 125 aa7.21□□□□□ -1.26
TDP1-202ENST00000393452 OR5AU1Q8NGC0 362 aa7.21□□□□□ -1.26
TDP1-202ENST00000393452 OR10G8Q8NGN5 311 aa7.21□□□□□ -1.26
TDP1-202ENST00000393452 KMT2BQ9UMN6 2715 aaPredicted RBP7.21□□□□□ -1.26
TDP1-202ENST00000393452 HELTA6NFD8 242 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 NDUFA3O95167 84 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 PLP1P60201 277 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 SUMO1P63165 101 aaKnown RBP7.2□□□□□ -1.26
TDP1-202ENST00000393452 UBE2L3P68036 154 aaKnown RBP7.2□□□□□ -1.26
TDP1-202ENST00000393452 ACTL10Q5JWF8 245 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 HIST3H2BBQ8N257 126 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 SGMS2Q8NHU3 365 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 C22orf15Q8WYQ4 148 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 NBR2O15453 112 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 APELAP0DMC3 54 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 CDKN1AP38936 164 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 GPR6P46095 362 aaPredicted RBP7.2□□□□□ -1.26
TDP1-202ENST00000393452 UQCRFS1P47985 274 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 KLRD1Q13241 179 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 MMDQ15546 238 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 CLEC12BQ2HXU8 276 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 COA6Q5JTJ3 125 aaKnown RBP7.2□□□□□ -1.26
TDP1-202ENST00000393452 GFI1BQ5VTD9 330 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 LHFPL4Q7Z7J7 247 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 ARL6IP6Q8N6S5 226 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 PAXXQ9BUH6 204 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 GAR1Q9NY12 217 aaKnown RBP7.2□□□□□ -1.26
TDP1-202ENST00000393452 PITPNC1Q9UKF7 332 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 HILPDAQ9Y5L2 63 aa7.2□□□□□ -1.26
TDP1-202ENST00000393452 TRAV9-1A0A075B6T8 112 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 PRSS47A8MTI9 375 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 I3L2K1 104 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 NDUFS7O75251 213 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 MOSP00540 346 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 FABP1P07148 127 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 ZFP36P26651 326 aaKnown RBP7.19□□□□□ -1.26
TDP1-202ENST00000393452 CENPWQ5EE01 88 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 LINC00305Q7Z4B0 112 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 FXYD5Q96DB9 178 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 OR51M1Q9H341 326 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 GSN-AS1Q9NRJ2 163 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 PKD1L2Q7Z442 2459 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 AKAP6Q13023 2319 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 TRAV20A0A0B4J274 112 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 IGLV2-8P01709 118 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 PYYP10082 97 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 MYCNOSP40205 109 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 GNG4P50150 75 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 EFNA4P52798 201 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 LGALS4P56470 323 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 RPL15P61313 204 aaKnown RBP7.19□□□□□ -1.26
TDP1-202ENST00000393452 PLGLAQ15195 96 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 STXBP6Q8NFX7 210 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 PERPQ96FX8 193 aa7.19□□□□□ -1.26
TDP1-202ENST00000393452 USP24Q9UPU5 2620 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 OOSP1A8MZH6 123 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 IGLC1P0CG04 106 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 HNF1AP20823 631 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 GNLYP22749 145 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 MINOS1Q5TGZ0 78 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 VMO1Q7Z5L0 202 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 IGF2BP2-AS1Q96M15 143 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 GPR61Q9BZJ8 451 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 IL36BQ9NZH7 164 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 CDC42EP3Q9UKI2 254 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 MINOS1-NBL1R4GNA1 71 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 V9GYV3 84 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 A0A0U1RQK1 487 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 ZNF320A2RRD8 509 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 C19orf84I3L1E1 186 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 GCGP01275 180 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 HOXB4P17483 251 aaPredicted RBP7.18□□□□□ -1.26
TDP1-202ENST00000393452 S100A2P29034 98 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 PDLIM4P50479 330 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 TAS2R60P59551 318 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 EBI3Q14213 229 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 C5orf64Q2M2E5 130 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 TIGITQ495A1 244 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 FBLN7Q53RD9 439 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 CCDC144NLQ6NUI1 221 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 TMEM183AQ8IXX5 376 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 OR1B1Q8NGR6 318 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 WNT10AQ9GZT5 417 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 SIRPDQ9H106 197 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 UBTD1Q9HAC8 227 aa7.18□□□□□ -1.26
TDP1-202ENST00000393452 IGHV3-21A0A0B4J1V1 117 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 K7EIM0 57 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 HYPMO75409 117 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 CNIH1O95406 144 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 ORM2P19652 201 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms