RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 AKAP14Q86UN6 197 aa10.16□□□□□ -0.78
USP44-202ENST00000393091 TENM1Q9UKZ4 2725 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 CCNKO75909 580 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 CLEC3BP05452 202 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 METTL15P1P0C7V9 234 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 ZNF600Q6ZNG1 722 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 OR2K2Q8NGT1 345 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 TMEM190Q8WZ59 177 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 IGKV1OR2-108A0A075B7D4 117 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 A0A1B0GVG6 124 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 DFFBO76075 338 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 C8orf86Q6ZUL3 223 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 ATP5SQ99766 215 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 TIMM9Q9Y5J7 89 aa10.15□□□□□ -0.78
USP44-202ENST00000393091 SELENOTP62341 195 aa10.14□□□□□ -0.79
USP44-202ENST00000393091 KCNRGQ8N5I3 272 aa10.14□□□□□ -0.79
USP44-202ENST00000393091 OR11H1Q8NG94 326 aa10.14□□□□□ -0.79
USP44-202ENST00000393091 MARC2Q969Z3 335 aa10.14□□□□□ -0.79
USP44-202ENST00000393091 SETD2Q9BYW2 2564 aaPredicted RBP10.14□□□□□ -0.79
USP44-202ENST00000393091 TRBV12-3P01733 135 aa10.14□□□□□ -0.79
USP44-202ENST00000393091 OR10J1P30954 320 aa10.14□□□□□ -0.79
USP44-202ENST00000393091 HOXD3P31249 432 aaPredicted RBP10.14□□□□□ -0.79
USP44-202ENST00000393091 ACSM6Q6P461 480 aa10.14□□□□□ -0.79
USP44-202ENST00000393091 CLEC19AQ6UXS0 136 aa10.14□□□□□ -0.79
USP44-202ENST00000393091 CHRDL1Q9BU40 450 aa10.14□□□□□ -0.79
USP44-202ENST00000393091 MCRIP2Q9BUT9 160 aaKnown RBP10.14□□□□□ -0.79
USP44-202ENST00000393091 MLANAQ16655 118 aa10.14□□□□□ -0.79
USP44-202ENST00000393091 OR8G2PQ6IF36 304 aa10.14□□□□□ -0.79
USP44-202ENST00000393091 UQCC1Q9NVA1 299 aa10.14□□□□□ -0.79
USP44-202ENST00000393091 RND2P52198 227 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 TEPPQ6URK8 271 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 ZNF546Q86UE3 836 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 OR11H4Q8NGC9 324 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 GPR61Q9BZJ8 451 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 A0A0D9SG52 128 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 GNG7O60262 68 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 RPL29P47914 159 aaKnown RBP10.13□□□□□ -0.79
USP44-202ENST00000393091 INSL3P51460 131 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 CAV2P51636 162 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 PRR20EP86478 221 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 PRR20CP86479 221 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 PRR20DP86480 221 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 PRR20BP86481 221 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 PRR20AP86496 221 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 NHLH2Q02577 135 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 OPCMLQ14982 345 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 NPIPB3Q92617 1050 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 RCC1LQ96I51 464 aaKnown RBP10.13□□□□□ -0.79
USP44-202ENST00000393091 HYLS1Q96M11 299 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 UFC1Q9Y3C8 167 aa10.13□□□□□ -0.79
USP44-202ENST00000393091 H3BP45 60 aa10.12□□□□□ -0.79
USP44-202ENST00000393091 NUPL2O15504 423 aaKnown RBP10.12□□□□□ -0.79
USP44-202ENST00000393091 PPP1R14BQ96C90 147 aa10.12□□□□□ -0.79
USP44-202ENST00000393091 GPR183P32249 361 aa10.12□□□□□ -0.79
USP44-202ENST00000393091 FAM106AQ4KMX7 169 aa10.12□□□□□ -0.79
USP44-202ENST00000393091 Q56UQ5 140 aa10.12□□□□□ -0.79
USP44-202ENST00000393091 UBAC2Q8NBM4 344 aa10.12□□□□□ -0.79
USP44-202ENST00000393091 OR2G3Q8NGZ4 309 aa10.12□□□□□ -0.79
USP44-202ENST00000393091 WDR61Q9GZS3 305 aaKnown RBP10.12□□□□□ -0.79
USP44-202ENST00000393091 OR2T8A6NH00 312 aa10.12□□□□□ -0.79
USP44-202ENST00000393091 CRYBB3P26998 211 aa10.12□□□□□ -0.79
USP44-202ENST00000393091 NUP62P37198 522 aaPredicted RBP10.12□□□□□ -0.79
USP44-202ENST00000393091 KPRPQ5T749 579 aaPredicted RBP10.12□□□□□ -0.79
USP44-202ENST00000393091 VSIRQ9H7M9 311 aa10.12□□□□□ -0.79
USP44-202ENST00000393091 PEMTQ9UBM1 199 aa10.12□□□□□ -0.79
USP44-202ENST00000393091 TSPAN15O95858 294 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 IGHV3-11P01762 117 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 LRRC37A5PQ49AS3 106 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 CYP2G1PQ6ZSU1 146 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 OR5C1Q8NGR4 320 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 MGST2Q99735 147 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 KCNIP2Q9NS61 270 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 MRPL27Q9P0M9 148 aaKnown RBP10.11□□□□□ -0.79
USP44-202ENST00000393091 PPP5D1E7EU14 171 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 CD5P06127 495 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 CSN3P07498 182 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 DEFA5Q01523 94 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 INO80EQ8NBZ0 244 aaPredicted RBP10.11□□□□□ -0.79
USP44-202ENST00000393091 OR9G4Q8NGQ1 327 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 PSMG3Q9BT73 122 aaPredicted RBP10.11□□□□□ -0.79
USP44-202ENST00000393091 WFDC1Q9HC57 220 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 CYTL1Q9NRR1 136 aa10.11□□□□□ -0.79
USP44-202ENST00000393091 TECRQ9NZ01 308 aaKnown RBP10.11□□□□□ -0.79
USP44-202ENST00000393091 NUDT19A8MXV4 375 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 LINC00869P0C866 280 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 RPEL1Q2QD12 228 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 NSUN5P1Q3KNT7 163 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 DLX4Q92988 240 aaPredicted RBP10.1□□□□□ -0.79
USP44-202ENST00000393091 ZC4H2Q9NQZ6 224 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 CST7O76096 145 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 TIGITQ495A1 244 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 TRAV2A0A0B4J234 112 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 ZNF266Q14584 549 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 TOMM20LQ6UXN7 152 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 OR51G1Q8NGK1 321 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 STOML3Q8TAV4 291 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 DPF1Q92782 380 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 GGTLC1Q9BX51 225 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 RNF24Q9Y225 148 aa10.1□□□□□ -0.79
USP44-202ENST00000393091 TMEM213A2RRL7 107 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms