RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 HELTA6NFD8 242 aa20.41■□□□□ 0.86
SMARCD3-203ENST00000392811 CORTO00230 105 aa20.41■□□□□ 0.86
SMARCD3-203ENST00000392811 PYYP10082 97 aa20.41■□□□□ 0.86
SMARCD3-203ENST00000392811 CEACAM3P40198 252 aa20.41■□□□□ 0.86
SMARCD3-203ENST00000392811 LCN2P80188 198 aa20.41■□□□□ 0.86
SMARCD3-203ENST00000392811 MMDQ15546 238 aa20.41■□□□□ 0.86
SMARCD3-203ENST00000392811 TRGV9Q99603 122 aa20.41■□□□□ 0.86
SMARCD3-203ENST00000392811 UBTD1Q9HAC8 227 aa20.41■□□□□ 0.86
SMARCD3-203ENST00000392811 TACC2O95359 2948 aa20.41■□□□□ 0.86
SMARCD3-203ENST00000392811 FOXL1Q12952 345 aa20.41■□□□□ 0.86
SMARCD3-203ENST00000392811 SGMS2Q8NHU3 365 aa20.41■□□□□ 0.86
SMARCD3-203ENST00000392811 ELOA3CA0A087WX78 387 aaPredicted RBP20.4■□□□□ 0.86
SMARCD3-203ENST00000392811 A0A1W2PRD5 423 aa20.4■□□□□ 0.86
SMARCD3-203ENST00000392811 A0A1W2PRF3 423 aa20.4■□□□□ 0.86
SMARCD3-203ENST00000392811 A0A1W2PRM7 423 aa20.4■□□□□ 0.86
SMARCD3-203ENST00000392811 GNLYP22749 145 aa20.4■□□□□ 0.86
SMARCD3-203ENST00000392811 PAX2Q02962 417 aa20.4■□□□□ 0.86
SMARCD3-203ENST00000392811 CENPWQ5EE01 88 aa20.4■□□□□ 0.86
SMARCD3-203ENST00000392811 HIST3H2BBQ8N257 126 aa20.4■□□□□ 0.86
SMARCD3-203ENST00000392811 PAXXQ9BUH6 204 aa20.4■□□□□ 0.86
SMARCD3-203ENST00000392811 GNG4P50150 75 aa20.39■□□□□ 0.86
SMARCD3-203ENST00000392811 LINC00305Q7Z4B0 112 aa20.39■□□□□ 0.85
SMARCD3-203ENST00000392811 A6NNC1 897 aa20.38■□□□□ 0.85
SMARCD3-203ENST00000392811 ORM2P19652 201 aa20.38■□□□□ 0.85
SMARCD3-203ENST00000392811 CD24P25063 80 aa20.38■□□□□ 0.85
SMARCD3-203ENST00000392811 PDZD11Q5EBL8 140 aa20.38■□□□□ 0.85
SMARCD3-203ENST00000392811 ACTL10Q5JWF8 245 aa20.38■□□□□ 0.85
SMARCD3-203ENST00000392811 GPR61Q9BZJ8 451 aa20.38■□□□□ 0.85
SMARCD3-203ENST00000392811 OR51M1Q9H341 326 aa20.38■□□□□ 0.85
SMARCD3-203ENST00000392811 GAR1Q9NY12 217 aaKnown RBP20.38■□□□□ 0.85
SMARCD3-203ENST00000392811 NBR2O15453 112 aa20.37■□□□□ 0.85
SMARCD3-203ENST00000392811 CNIH1O95406 144 aa20.37■□□□□ 0.85
SMARCD3-203ENST00000392811 ZFP36P26651 326 aaKnown RBP20.37■□□□□ 0.85
SMARCD3-203ENST00000392811 OR1B1Q8NGR6 318 aa20.37■□□□□ 0.85
SMARCD3-203ENST00000392811 A0A0U1RQK1 487 aa20.37■□□□□ 0.85
SMARCD3-203ENST00000392811 ZNF320A2RRD8 509 aa20.37■□□□□ 0.85
SMARCD3-203ENST00000392811 C19orf84I3L1E1 186 aa20.37■□□□□ 0.85
SMARCD3-203ENST00000392811 VMO1Q7Z5L0 202 aa20.37■□□□□ 0.85
SMARCD3-203ENST00000392811 GSX1Q9H4S2 264 aaPredicted RBP20.37■□□□□ 0.85
SMARCD3-203ENST00000392811 S100A2P29034 98 aa20.36■□□□□ 0.85
SMARCD3-203ENST00000392811 OR5I1Q13606 314 aa20.36■□□□□ 0.85
SMARCD3-203ENST00000392811 C1orf122Q6ZSJ8 110 aa20.36■□□□□ 0.85
SMARCD3-203ENST00000392811 FXYD5Q96DB9 178 aa20.36■□□□□ 0.85
SMARCD3-203ENST00000392811 SRSF8Q9BRL6 282 aaKnown RBP20.36■□□□□ 0.85
SMARCD3-203ENST00000392811 PITPNC1Q9UKF7 332 aa20.36■□□□□ 0.85
SMARCD3-203ENST00000392811 FBLN7Q53RD9 439 aa20.36■□□□□ 0.85
SMARCD3-203ENST00000392811 NPBQ8NG41 125 aa20.36■□□□□ 0.85
SMARCD3-203ENST00000392811 PERPQ96FX8 193 aa20.36■□□□□ 0.85
SMARCD3-203ENST00000392811 BTF3L4Q96K17 158 aa20.36■□□□□ 0.85
SMARCD3-203ENST00000392811 WNT10AQ9GZT5 417 aa20.36■□□□□ 0.85
SMARCD3-203ENST00000392811 SLC17A3O00476 420 aa20.35■□□□□ 0.85
SMARCD3-203ENST00000392811 KIR3DL3Q8N743 410 aa20.35■□□□□ 0.85
SMARCD3-203ENST00000392811 I3L2K1 104 aa20.34■□□□□ 0.85
SMARCD3-203ENST00000392811 NDUFA3O95167 84 aa20.34■□□□□ 0.85
SMARCD3-203ENST00000392811 SSX2Q16385 188 aa20.34■□□□□ 0.85
SMARCD3-203ENST00000392811 NIT2Q9NQR4 276 aa20.34■□□□□ 0.85
SMARCD3-203ENST00000392811 RPL15P61313 204 aaKnown RBP20.34■□□□□ 0.85
SMARCD3-203ENST00000392811 HES1Q14469 280 aa20.34■□□□□ 0.85
SMARCD3-203ENST00000392811 IL36BQ9NZH7 164 aa20.34■□□□□ 0.85
SMARCD3-203ENST00000392811 EFNA4P52798 201 aa20.33■□□□□ 0.85
SMARCD3-203ENST00000392811 ERVFC1-1P60608 527 aa20.33■□□□□ 0.85
SMARCD3-203ENST00000392811 IGF2BP2-AS1Q96M15 143 aa20.33■□□□□ 0.85
SMARCD3-203ENST00000392811 HYPMO75409 117 aa20.32■□□□□ 0.84
SMARCD3-203ENST00000392811 TIGITQ495A1 244 aa20.32■□□□□ 0.84
SMARCD3-203ENST00000392811 ZNF329Q86UD4 541 aa20.32■□□□□ 0.84
SMARCD3-203ENST00000392811 DYNAPQ8N1N2 210 aa20.32■□□□□ 0.84
SMARCD3-203ENST00000392811 SNRPCP09234 159 aaKnown RBP20.32■□□□□ 0.84
SMARCD3-203ENST00000392811 IGLC1P0CG04 106 aa20.32■□□□□ 0.84
SMARCD3-203ENST00000392811 HOXB4P17483 251 aaPredicted RBP20.32■□□□□ 0.84
SMARCD3-203ENST00000392811 IGLV2-8P01709 118 aa20.31■□□□□ 0.84
SMARCD3-203ENST00000392811 FXYD3Q14802 87 aa20.31■□□□□ 0.84
SMARCD3-203ENST00000392811 STXBP6Q8NFX7 210 aa20.31■□□□□ 0.84
SMARCD3-203ENST00000392811 OR10D4PQ8NGN7 298 aa20.31■□□□□ 0.84
SMARCD3-203ENST00000392811 V9GYV3 84 aa20.31■□□□□ 0.84
SMARCD3-203ENST00000392811 PLP1P60201 277 aa20.31■□□□□ 0.84
SMARCD3-203ENST00000392811 FAM103A1Q9BTL3 118 aaKnown RBP20.31■□□□□ 0.84
SMARCD3-203ENST00000392811 XKRY2A2RUG3 117 aa20.3■□□□□ 0.84
SMARCD3-203ENST00000392811 C5orf64Q2M2E5 130 aa20.3■□□□□ 0.84
SMARCD3-203ENST00000392811 TMEM183AQ8IXX5 376 aa20.3■□□□□ 0.84
SMARCD3-203ENST00000392811 LINC00479Q96M42 142 aa20.3■□□□□ 0.84
SMARCD3-203ENST00000392811 SIRPDQ9H106 197 aa20.3■□□□□ 0.84
SMARCD3-203ENST00000392811 TRAPPC1Q9Y5R8 145 aa20.3■□□□□ 0.84
SMARCD3-203ENST00000392811 GCGP01275 180 aa20.29■□□□□ 0.84
SMARCD3-203ENST00000392811 FABP4P15090 132 aa20.29■□□□□ 0.84
SMARCD3-203ENST00000392811 CCDC144NLQ6NUI1 221 aa20.29■□□□□ 0.84
SMARCD3-203ENST00000392811 PSG1P11464 419 aa20.29■□□□□ 0.84
SMARCD3-203ENST00000392811 PYY3Q5JQD4 70 aa20.29■□□□□ 0.84
SMARCD3-203ENST00000392811 COA6Q5JTJ3 125 aaKnown RBP20.29■□□□□ 0.84
SMARCD3-203ENST00000392811 RNASE7Q9H1E1 156 aaKnown RBP20.29■□□□□ 0.84
SMARCD3-203ENST00000392811 CDC42EP3Q9UKI2 254 aa20.29■□□□□ 0.84
SMARCD3-203ENST00000392811 TRAV9-1A0A075B6T8 112 aa20.28■□□□□ 0.84
SMARCD3-203ENST00000392811 K7EIM0 57 aa20.28■□□□□ 0.84
SMARCD3-203ENST00000392811 MYCNOSP40205 109 aa20.28■□□□□ 0.84
SMARCD3-203ENST00000392811 S100A12P80511 92 aa20.28■□□□□ 0.84
SMARCD3-203ENST00000392811 OOSP1A8MZH6 123 aa20.27■□□□□ 0.84
SMARCD3-203ENST00000392811 PEX7O00628 323 aa20.27■□□□□ 0.84
SMARCD3-203ENST00000392811 TAS2R60P59551 318 aa20.27■□□□□ 0.84
SMARCD3-203ENST00000392811 RANP62826 216 aaKnown RBP20.27■□□□□ 0.84
SMARCD3-203ENST00000392811 RPEL1Q2QD12 228 aa20.27■□□□□ 0.84
SMARCD3-203ENST00000392811 MINOS1Q5TGZ0 78 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms