RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 A0A0A6YYH2 397 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 TRBV6-4A0A1B0GX49 114 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 DPRXA6NFQ7 191 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 A6NJ64 397 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 LRRN3E7EW58 273 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 SULT1B1O43704 296 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 OR2J2O76002 312 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 PROSCO94903 275 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 RPS12P25398 132 aaKnown RBP-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 BLVRAP53004 296 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 SNRPD2P62316 118 aaKnown RBP-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 SPINK9Q5DT21 86 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 RNASE10Q5GAN6 216 aaKnown RBP-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 LINC00322Q6ZN03 302 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 CLVS1Q8IUQ0 354 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 HIST3H2BBQ8N257 126 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 PLPP5Q8NEB5 264 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 OR13D1Q8NGV5 346 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 KLK6Q92876 244 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 OR52E6Q96RD3 313 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 GINS4Q9BRT9 223 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 DCSTAMPQ9H295 470 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 COL24A1Q17RW2 1714 aa-0.14□□□□□ -2.43
RNU6-541P-201ENST00000384709 DCTN3O75935 186 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 HLA-DRB1P01911 266 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 ISG15P05161 165 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 MGST1P10620 155 aaKnown RBP-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 MAGEA2P43356 314 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 HIST3H3Q16695 136 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 LPCAT3Q6P1A2 487 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 KRTAP26-1Q6PEX3 210 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 TEX261Q6UWH6 196 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 FAM151BQ6UXP7 276 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 BPIFA4PQ86YQ2 179 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 TSPAN32Q96QS1 320 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 C11orf68Q9H3H3 251 aaKnown RBP-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 NIT2Q9NQR4 276 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 SLC39A9Q9NUM3 307 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 FGFR1OP2Q9NVK5 253 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 TMEM56-RWDD3S4R434 201 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 U3KQ87 197 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 WRNQ14191 1432 aaPredicted RBP eCLIP-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 TNS3Q68CZ2 1445 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 EVC2Q86UK5 1308 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 MYO3BQ8WXR4 1341 aa-0.15□□□□□ -2.43
RNU6-541P-201ENST00000384709 EXOC1LA0A1B0GW35 172 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 FAAHO00519 579 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 CCL16O15467 120 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 NUPR1O60356 82 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 FOXA3P55318 350 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 OR2F1Q13607 317 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 LINC01554Q52M75 96 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 GKN2Q86XP6 184 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 C20orf196Q8IYI0 205 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 OR11H6Q8NGC7 330 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 TEX47Q8TBZ9 253 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 GPR146Q96CH1 333 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 RNF122Q9H9V4 155 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 CMTM6Q9NX76 183 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 EPDR1Q9UM22 224 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 CACNA1HO95180 2353 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 CECR2Q9BXF3 1484 aa-0.16□□□□□ -2.44
RNU6-541P-201ENST00000384709 TRAV9-1A0A075B6T8 112 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 IGHV1-58A0A0C4DH39 117 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 C7orf71A4D174 169 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 CCDC160A6NGH7 325 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 KDM6AO15550 1401 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 DEXIO95424 95 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 ZNF682O95780 498 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 IGLV3-1P01715 115 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 OR4E1P0C645 316 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 SMIM10L2AP0DMW4 78 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 SMIM10L2BP0DMW5 78 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 AP2S1P53680 142 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 TMED1Q13445 227 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 EXOC3-AS1Q8N2X6 119 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 C12orf45Q8N5I9 185 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 OR52R1Q8NGF1 315 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 OR8D4Q8NGM9 314 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 PTH2Q96A98 100 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 TRPM7Q96QT4 1865 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 NABP2Q9BQ15 211 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 C14orf132Q9NPU4 83 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 USE1Q9NZ43 259 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 SLC35A3Q9Y2D2 325 aa-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 LSM5Q9Y4Y9 91 aaKnown RBP-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 V9GYY5 206 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-541P-201ENST00000384709 ROBO3Q96MS0 1386 aa-0.18□□□□□ -2.44
RNU6-541P-201ENST00000384709 MYH3P11055 1940 aa-0.18□□□□□ -2.44
RNU6-541P-201ENST00000384709 N4BP2Q86UW6 1770 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-541P-201ENST00000384709 PQLC2LA1A4F0 135 aa-0.18□□□□□ -2.44
RNU6-541P-201ENST00000384709 HOXA6P31267 233 aa-0.18□□□□□ -2.44
RNU6-541P-201ENST00000384709 CASQ1P31415 396 aa-0.18□□□□□ -2.44
RNU6-541P-201ENST00000384709 RPL5P46777 297 aaKnown RBP-0.18□□□□□ -2.44
RNU6-541P-201ENST00000384709 PSME3P61289 254 aa-0.18□□□□□ -2.44
RNU6-541P-201ENST00000384709 TSNQ15631 228 aaKnown RBP-0.18□□□□□ -2.44
RNU6-541P-201ENST00000384709 TRAPPC6BQ86SZ2 158 aa-0.18□□□□□ -2.44
RNU6-541P-201ENST00000384709 ATOH7Q8N100 152 aa-0.18□□□□□ -2.44
RNU6-541P-201ENST00000384709 DNAJC9Q8WXX5 260 aa-0.18□□□□□ -2.44
RNU6-541P-201ENST00000384709 LYSMD1Q96S90 227 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms