RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 GAGE1Q13065 139 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 RNASEH2CQ8TDP1 164 aaKnown RBP12.14□□□□□ -0.47
PRDM16-203ENST00000378391 DUX5Q96PT3 197 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 RPP21Q9H633 154 aaKnown RBP12.14□□□□□ -0.47
PRDM16-203ENST00000378391 MRPS18CQ9Y3D5 142 aaKnown RBP12.14□□□□□ -0.47
PRDM16-203ENST00000378391 IGLV3-12A0A075B6K2 115 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 IGKV1D-13A0A0B4J2D9 117 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 GPX1P07203 203 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 IGKV1-13P0DP09 117 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 ZNF56Q15929 161 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 TMEM242Q9NWH2 141 aa12.14□□□□□ -0.47
PRDM16-203ENST00000378391 ARHGEF17Q96PE2 2063 aaPredicted RBP12.13□□□□□ -0.47
PRDM16-203ENST00000378391 SERF1AO75920 110 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 APOHP02749 345 aaPredicted RBP12.13□□□□□ -0.47
PRDM16-203ENST00000378391 FAM106AQ4KMX7 169 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 IMMP1LQ96LU5 166 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 KLK15Q9H2R5 256 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 NRN1Q9NPD7 142 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 FOXD3Q9UJU5 478 aaPredicted RBP12.13□□□□□ -0.47
PRDM16-203ENST00000378391 RNF115Q9Y4L5 304 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 CXCL1P09341 107 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 ABHD17AQ96GS6 310 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 FMC1Q96HJ9 113 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 IGHV1-69-2A0A0G2JMI3 117 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 CECR9P0C854 216 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 PSG7Q13046 419 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 DDB2Q92466 427 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 LYZL4Q96KX0 146 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 ZNF585BQ52M93 769 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 GFI1BQ5VTD9 330 aa12.13□□□□□ -0.47
PRDM16-203ENST00000378391 TRBV24-1A0A075B6N3 115 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 C1QTNF9P0C862 333 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 PYY3Q5JQD4 70 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 CEACAM1P13688 526 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 GNG5P63218 68 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 MIR17HGQ75NE6 70 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 IGLV3-32A0A0A0MS00 114 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 SEMA5BQ9P283 1151 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 EPOPA6NHQ4 379 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 CIARTQ8N365 385 aaPredicted RBP12.12□□□□□ -0.47
PRDM16-203ENST00000378391 FER1L6-AS1Q8NA97 138 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 IQCF6A8MYZ5 107 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 EREGO14944 169 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 MLNRO43193 412 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 EVI2AP22794 236 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 TSPOP30536 169 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 ATP5G2Q06055 141 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 FAM19A2Q8N3H0 131 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 SIGLEC12Q96PQ1 595 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 AKAP6Q13023 2319 aa12.12□□□□□ -0.47
PRDM16-203ENST00000378391 HEATR5AQ86XA9 2040 aa12.11□□□□□ -0.47
PRDM16-203ENST00000378391 FOXI3A8MTJ6 420 aaPredicted RBP12.11□□□□□ -0.47
PRDM16-203ENST00000378391 UMODP07911 640 aa12.11□□□□□ -0.47
PRDM16-203ENST00000378391 LGALS1P09382 135 aaKnown RBP12.11□□□□□ -0.47
PRDM16-203ENST00000378391 EEF1AKMT3Q96AZ1 226 aa12.11□□□□□ -0.47
PRDM16-203ENST00000378391 ZNF524Q96C55 264 aa12.11□□□□□ -0.47
PRDM16-203ENST00000378391 OSTCQ9NRP0 149 aa12.11□□□□□ -0.47
PRDM16-203ENST00000378391 ZDBF2Q9HCK1 2354 aa12.11□□□□□ -0.47
PRDM16-203ENST00000378391 B9A039 149 aa12.11□□□□□ -0.47
PRDM16-203ENST00000378391 TEX45Q8NA69 505 aa12.11□□□□□ -0.47
PRDM16-203ENST00000378391 PLPPR1Q8TBJ4 325 aa12.11□□□□□ -0.47
PRDM16-203ENST00000378391 CHTOPQ9Y3Y2 248 aaKnown RBP12.11□□□□□ -0.47
PRDM16-203ENST00000378391 CELA3AP09093 270 aa12.11□□□□□ -0.47
PRDM16-203ENST00000378391 MRPL14Q6P1L8 145 aaKnown RBP12.11□□□□□ -0.47
PRDM16-203ENST00000378391 HIST1H2BLQ99880 126 aa12.11□□□□□ -0.47
PRDM16-203ENST00000378391 GAGE12HA6NDE8 117 aa12.11□□□□□ -0.47
PRDM16-203ENST00000378391 HIST3H2BBQ8N257 126 aa12.1□□□□□ -0.47
PRDM16-203ENST00000378391 WIPF3A6NGB9 483 aa12.1□□□□□ -0.47
PRDM16-203ENST00000378391 HIGD1CA8MV81 97 aa12.1□□□□□ -0.47
PRDM16-203ENST00000378391 YPEL1O60688 119 aa12.1□□□□□ -0.47
PRDM16-203ENST00000378391 CD300EQ496F6 205 aaPredicted RBP12.1□□□□□ -0.47
PRDM16-203ENST00000378391 YPEL2Q96QA6 119 aa12.1□□□□□ -0.47
PRDM16-203ENST00000378391 RFNGQ9Y644 331 aa12.1□□□□□ -0.47
PRDM16-203ENST00000378391 TRAV24A0A0B4J272 114 aa12.1□□□□□ -0.47
PRDM16-203ENST00000378391 TRBV7-9A0A0J9YWB2 115 aa12.1□□□□□ -0.47
PRDM16-203ENST00000378391 WDR82Q6UXN9 313 aa12.1□□□□□ -0.47
PRDM16-203ENST00000378391 DLX4Q92988 240 aaPredicted RBP12.1□□□□□ -0.47
PRDM16-203ENST00000378391 A0A1W2PRE2 83 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 TMEM170BQ5T4T1 132 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 ORMDL3Q8N138 153 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 C18orf15Q96N68 181 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 A0A1B0GW64 132 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 NAPSAO96009 420 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 IGHV2-70P01814 119 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 WFDC12Q8WWY7 111 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 SLC25A15Q9Y619 301 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 TRAV1-1A0A0B4J248 108 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 TMEM126AQ9H061 195 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 DPM3Q9P2X0 92 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 WDR83OSQ9Y284 106 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 MPDZO75970 2070 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 ADMP35318 185 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 DCTN5Q9BTE1 182 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 CACNA1EQ15878 2313 aa12.09□□□□□ -0.47
PRDM16-203ENST00000378391 NCR2O95944 276 aa12.08□□□□□ -0.47
PRDM16-203ENST00000378391 ZNF497Q6ZNH5 498 aa12.08□□□□□ -0.47
PRDM16-203ENST00000378391 WISP1O95388 367 aa12.08□□□□□ -0.48
PRDM16-203ENST00000378391 SRSF7Q16629 238 aaKnown RBP eCLIP12.08□□□□□ -0.48
PRDM16-203ENST00000378391 LINC00312Q9Y6C7 94 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms