RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 THAP8Q8NA92 274 aa16.41■□□□□ 0.22
CBWD3-202ENST00000377342 ATP5SQ99766 215 aa16.41■□□□□ 0.22
CBWD3-202ENST00000377342 CHRDL1Q9BU40 450 aa16.41■□□□□ 0.22
CBWD3-202ENST00000377342 ANK2Q01484 3957 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 NUDT19A8MXV4 375 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 BOLA2-SMG1P6H3BVE0 249 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 BMPR1BO00238 502 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 CTSGP08311 255 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 NPBWR1P48145 328 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 NKX2-5P52952 324 aaPredicted RBP16.4■□□□□ 0.22
CBWD3-202ENST00000377342 PEF1Q9UBV8 284 aaKnown RBP16.4■□□□□ 0.22
CBWD3-202ENST00000377342 LSM4Q9Y4Z0 139 aaKnown RBP16.4■□□□□ 0.22
CBWD3-202ENST00000377342 IGHV4OR15-8A0A075B7B6 117 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 A0A087WW49 117 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 TGOLN2O43493 480 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 IGKV1-17P01599 117 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 ATP6V1FQ16864 119 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 LGALSLQ3ZCW2 172 aaPredicted RBP16.4■□□□□ 0.22
CBWD3-202ENST00000377342 C12orf54Q6X4T0 127 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 TMEM144Q7Z5S9 345 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 C9orf62Q8N4C0 152 aa16.4■□□□□ 0.22
CBWD3-202ENST00000377342 WNK1Q9H4A3 2382 aa16.39■□□□□ 0.21
CBWD3-202ENST00000377342 GNG7O60262 68 aa16.39■□□□□ 0.21
CBWD3-202ENST00000377342 OR10J1P30954 320 aa16.39■□□□□ 0.21
CBWD3-202ENST00000377342 NSUN5P1Q3KNT7 163 aa16.39■□□□□ 0.21
CBWD3-202ENST00000377342 LAMTOR1Q6IAA8 161 aa16.39■□□□□ 0.21
CBWD3-202ENST00000377342 DUX3Q96PT4 197 aa16.39■□□□□ 0.21
CBWD3-202ENST00000377342 WDR83OSQ9Y284 106 aa16.39■□□□□ 0.21
CBWD3-202ENST00000377342 VWFP04275 2813 aa16.39■□□□□ 0.21
CBWD3-202ENST00000377342 ARL3P36405 182 aa16.38■□□□□ 0.21
CBWD3-202ENST00000377342 NPVFQ9HCQ7 196 aa16.38■□□□□ 0.21
CBWD3-202ENST00000377342 TIGITQ495A1 244 aa16.37■□□□□ 0.21
CBWD3-202ENST00000377342 FAM209BQ5JX69 171 aa16.37■□□□□ 0.21
CBWD3-202ENST00000377342 C3orf56Q8N813 242 aa16.37■□□□□ 0.21
CBWD3-202ENST00000377342 RAX2Q96IS3 184 aa16.37■□□□□ 0.21
CBWD3-202ENST00000377342 GAR1Q9NY12 217 aaKnown RBP16.37■□□□□ 0.21
CBWD3-202ENST00000377342 A0A0D9SG52 128 aa16.37■□□□□ 0.21
CBWD3-202ENST00000377342 DFFBO76075 338 aa16.37■□□□□ 0.21
CBWD3-202ENST00000377342 FHL3Q13643 280 aa16.37■□□□□ 0.21
CBWD3-202ENST00000377342 SPSB3Q6PJ21 355 aa16.37■□□□□ 0.21
CBWD3-202ENST00000377342 MGST2Q99735 147 aa16.37■□□□□ 0.21
CBWD3-202ENST00000377342 ZFP92A6NM28 416 aa16.36■□□□□ 0.21
CBWD3-202ENST00000377342 HSPB1P04792 205 aaKnown RBP16.36■□□□□ 0.21
CBWD3-202ENST00000377342 TEPPQ6URK8 271 aa16.36■□□□□ 0.21
CBWD3-202ENST00000377342 TMUB2Q71RG4 321 aa16.36■□□□□ 0.21
CBWD3-202ENST00000377342 OR11H1Q8NG94 326 aa16.36■□□□□ 0.21
CBWD3-202ENST00000377342 TRGV9Q99603 122 aa16.36■□□□□ 0.21
CBWD3-202ENST00000377342 CYTL1Q9NRR1 136 aa16.36■□□□□ 0.21
CBWD3-202ENST00000377342 TRAV30A0A087WSZ9 112 aa16.35■□□□□ 0.21
CBWD3-202ENST00000377342 FGF7P21781 194 aa16.35■□□□□ 0.21
CBWD3-202ENST00000377342 ZNF90Q03938 601 aa16.35■□□□□ 0.21
CBWD3-202ENST00000377342 WDR61Q9GZS3 305 aaKnown RBP16.35■□□□□ 0.21
CBWD3-202ENST00000377342 ARL6Q9H0F7 186 aa16.35■□□□□ 0.21
CBWD3-202ENST00000377342 IGHV3-35A0A0C4DH35 117 aa16.34■□□□□ 0.21
CBWD3-202ENST00000377342 NUPL2O15504 423 aaKnown RBP16.34■□□□□ 0.21
CBWD3-202ENST00000377342 BCL2L11O43521 198 aa16.34■□□□□ 0.21
CBWD3-202ENST00000377342 RPL7L1Q6DKI1 246 aaKnown RBP16.34■□□□□ 0.21
CBWD3-202ENST00000377342 BTNL8Q6UX41 500 aa16.34■□□□□ 0.21
CBWD3-202ENST00000377342 TMEM182Q6ZP80 229 aaPredicted RBP16.34■□□□□ 0.21
CBWD3-202ENST00000377342 GGCTO75223 188 aaKnown RBP16.34■□□□□ 0.21
CBWD3-202ENST00000377342 HOXD3P31249 432 aaPredicted RBP16.34■□□□□ 0.21
CBWD3-202ENST00000377342 ZNF616Q08AN1 781 aa16.34■□□□□ 0.21
CBWD3-202ENST00000377342 OR1N2Q8NGR9 330 aa16.34■□□□□ 0.21
CBWD3-202ENST00000377342 ARPC5LQ9BPX5 153 aa16.34■□□□□ 0.21
CBWD3-202ENST00000377342 GGTLC1Q9BX51 225 aa16.34■□□□□ 0.21
CBWD3-202ENST00000377342 PARD6GQ9BYG4 376 aaPredicted RBP16.34■□□□□ 0.21
CBWD3-202ENST00000377342 LINC01619G3V211 115 aa16.33■□□□□ 0.2
CBWD3-202ENST00000377342 CCL24O00175 119 aa16.33■□□□□ 0.2
CBWD3-202ENST00000377342 TAAR5O14804 337 aa16.33■□□□□ 0.2
CBWD3-202ENST00000377342 AGPAT2O15120 278 aa16.33■□□□□ 0.2
CBWD3-202ENST00000377342 OR2C1O95371 312 aa16.33■□□□□ 0.2
CBWD3-202ENST00000377342 SLURP1P55000 103 aa16.33■□□□□ 0.2
CBWD3-202ENST00000377342 YPEL3P61236 119 aaPredicted RBP16.33■□□□□ 0.2
CBWD3-202ENST00000377342 ZNF266Q14584 549 aa16.33■□□□□ 0.2
CBWD3-202ENST00000377342 SHISA2Q6UWI4 295 aa16.33■□□□□ 0.2
CBWD3-202ENST00000377342 NPCDR1Q9BY65 106 aa16.33■□□□□ 0.2
CBWD3-202ENST00000377342 TOMM40O96008 361 aa16.31■□□□□ 0.2
CBWD3-202ENST00000377342 GATA2P23769 480 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-202ENST00000377342 CAMLGP49069 296 aa16.31■□□□□ 0.2
CBWD3-202ENST00000377342 OPCMLQ14982 345 aa16.31■□□□□ 0.2
CBWD3-202ENST00000377342 RPEL1Q2QD12 228 aa16.31■□□□□ 0.2
CBWD3-202ENST00000377342 KRTAP21-3Q3LHN1 58 aa16.31■□□□□ 0.2
CBWD3-202ENST00000377342 ZNF600Q6ZNG1 722 aa16.31■□□□□ 0.2
CBWD3-202ENST00000377342 CYP2G1PQ6ZSU1 146 aa16.31■□□□□ 0.2
CBWD3-202ENST00000377342 RCC1LQ96I51 464 aaKnown RBP16.31■□□□□ 0.2
CBWD3-202ENST00000377342 ZFAND3Q9H8U3 227 aa16.31■□□□□ 0.2
CBWD3-202ENST00000377342 SLC45A2Q9UMX9 530 aa16.31■□□□□ 0.2
CBWD3-202ENST00000377342 KANTRA0A1W2PQU2 76 aa16.3■□□□□ 0.2
CBWD3-202ENST00000377342 MPDU1O75352 247 aa16.3■□□□□ 0.2
CBWD3-202ENST00000377342 SCGB2A1O75556 95 aa16.3■□□□□ 0.2
CBWD3-202ENST00000377342 IFNA5P01569 189 aa16.3■□□□□ 0.2
CBWD3-202ENST00000377342 PSG1P11464 419 aa16.3■□□□□ 0.2
CBWD3-202ENST00000377342 UNQ9165/PRO28630Q6UXU0 137 aa16.3■□□□□ 0.2
CBWD3-202ENST00000377342 RSG1Q9BU20 258 aa16.3■□□□□ 0.2
CBWD3-202ENST00000377342 RFNGQ9Y644 331 aa16.3■□□□□ 0.2
CBWD3-202ENST00000377342 TRRAPQ9Y4A5 3859 aa16.3■□□□□ 0.2
CBWD3-202ENST00000377342 HNRNPCP07910 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
CBWD3-202ENST00000377342 ZP3P21754 424 aa16.3■□□□□ 0.2
CBWD3-202ENST00000377342 RELQ04864 619 aaPredicted RBP16.3■□□□□ 0.2
CBWD3-202ENST00000377342 DPF1Q92782 380 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms