RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 DEFB135Q30KP9 77 aa13.18□□□□□ -0.3
IRF3-202ENST00000377135 ETFRF1Q6IPR1 90 aa13.18□□□□□ -0.3
IRF3-202ENST00000377135 TMED4Q7Z7H5 227 aa13.18□□□□□ -0.3
IRF3-202ENST00000377135 V9GYH0 126 aa13.18□□□□□ -0.3
IRF3-202ENST00000377135 IFNA10P01566 189 aa13.17□□□□□ -0.3
IRF3-202ENST00000377135 NPY1RP25929 384 aa13.17□□□□□ -0.3
IRF3-202ENST00000377135 RND2P52198 227 aa13.17□□□□□ -0.3
IRF3-202ENST00000377135 SRPXP78539 464 aa13.17□□□□□ -0.3
IRF3-202ENST00000377135 TNFRSF9Q07011 255 aa13.17□□□□□ -0.3
IRF3-202ENST00000377135 TMEM170AQ8WVE7 144 aa13.17□□□□□ -0.3
IRF3-202ENST00000377135 RNF183Q96D59 192 aa13.17□□□□□ -0.3
IRF3-202ENST00000377135 NARS2Q96I59 477 aaKnown RBP13.17□□□□□ -0.3
IRF3-202ENST00000377135 CSTL1Q9H114 145 aa13.17□□□□□ -0.3
IRF3-202ENST00000377135 U3KQ87 197 aa13.17□□□□□ -0.3
IRF3-202ENST00000377135 PIGBOS1A0A0B4J2F0 54 aa13.16□□□□□ -0.3
IRF3-202ENST00000377135 CRYBB3P26998 211 aa13.16□□□□□ -0.3
IRF3-202ENST00000377135 TMEM128Q5BJH2 165 aa13.16□□□□□ -0.3
IRF3-202ENST00000377135 OR1S2Q8NGQ3 325 aa13.16□□□□□ -0.3
IRF3-202ENST00000377135 NPIPB3Q92617 1050 aa13.16□□□□□ -0.3
IRF3-202ENST00000377135 TRIM63Q969Q1 353 aa13.16□□□□□ -0.3
IRF3-202ENST00000377135 HSPB7Q9UBY9 170 aa13.16□□□□□ -0.3
IRF3-202ENST00000377135 STARD9Q9P2P6 4700 aa13.16□□□□□ -0.3
IRF3-202ENST00000377135 SACSQ9NZJ4 4579 aa13.15□□□□□ -0.3
IRF3-202ENST00000377135 A0A0J9YWU9 116 aa13.15□□□□□ -0.3
IRF3-202ENST00000377135 MPTX1A8MV57 137 aa13.15□□□□□ -0.3
IRF3-202ENST00000377135 IGLC1P0CG04 106 aa13.15□□□□□ -0.3
IRF3-202ENST00000377135 OR10J1P30954 320 aa13.15□□□□□ -0.3
IRF3-202ENST00000377135 YPEL3P61236 119 aaPredicted RBP13.15□□□□□ -0.3
IRF3-202ENST00000377135 ZNF79Q15937 498 aa13.15□□□□□ -0.3
IRF3-202ENST00000377135 CCDC190Q86UF4 302 aa13.15□□□□□ -0.3
IRF3-202ENST00000377135 OR1S1Q8NH92 325 aa13.15□□□□□ -0.3
IRF3-202ENST00000377135 DTD1Q8TEA8 209 aa13.15□□□□□ -0.3
IRF3-202ENST00000377135 ACY3Q96HD9 319 aa13.15□□□□□ -0.3
IRF3-202ENST00000377135 SLC25A21Q9BQT8 299 aaPredicted RBP13.15□□□□□ -0.3
IRF3-202ENST00000377135 RBKSQ9H477 322 aa13.15□□□□□ -0.3
IRF3-202ENST00000377135 RABAC1Q9UI14 185 aa13.15□□□□□ -0.3
IRF3-202ENST00000377135 TRAV2A0A0B4J234 112 aa13.14□□□□□ -0.31
IRF3-202ENST00000377135 P2RY1P47900 373 aa13.14□□□□□ -0.31
IRF3-202ENST00000377135 DEFB131AP59861 70 aa13.14□□□□□ -0.31
IRF3-202ENST00000377135 RBMS2Q15434 407 aaKnown RBP13.14□□□□□ -0.31
IRF3-202ENST00000377135 LYG2Q86SG7 212 aa13.14□□□□□ -0.31
IRF3-202ENST00000377135 GRAMD2BQ96HH9 432 aa13.14□□□□□ -0.31
IRF3-202ENST00000377135 IFNA4P05014 189 aa13.13□□□□□ -0.31
IRF3-202ENST00000377135 RD3LP0DJH9 198 aa13.13□□□□□ -0.31
IRF3-202ENST00000377135 VAMP1P23763 118 aa13.13□□□□□ -0.31
IRF3-202ENST00000377135 ATP5IP56385 69 aaPredicted RBP13.13□□□□□ -0.31
IRF3-202ENST00000377135 SPANXN2Q5MJ10 180 aa13.13□□□□□ -0.31
IRF3-202ENST00000377135 DEDD2Q8WXF8 326 aa13.13□□□□□ -0.31
IRF3-202ENST00000377135 RBM38Q9H0Z9 239 aaKnown RBP13.13□□□□□ -0.31
IRF3-202ENST00000377135 ZNF701M0R085 212 aaPredicted RBP13.13□□□□□ -0.31
IRF3-202ENST00000377135 LEMD1Q68G75 181 aa13.13□□□□□ -0.31
IRF3-202ENST00000377135 FAM24BQ8N5W8 94 aa13.13□□□□□ -0.31
IRF3-202ENST00000377135 STXBP6Q8NFX7 210 aa13.13□□□□□ -0.31
IRF3-202ENST00000377135 U3KQE9 123 aa13.13□□□□□ -0.31
IRF3-202ENST00000377135 RYR2Q92736 4967 aa13.13□□□□□ -0.31
IRF3-202ENST00000377135 EIF2B2P49770 351 aaKnown RBP13.12□□□□□ -0.31
IRF3-202ENST00000377135 DUXBA0A1W2PPF3 345 aa13.11□□□□□ -0.31
IRF3-202ENST00000377135 HELTA6NFD8 242 aa13.11□□□□□ -0.31
IRF3-202ENST00000377135 K7EQG2 157 aa13.11□□□□□ -0.31
IRF3-202ENST00000377135 PITX3O75364 302 aa13.11□□□□□ -0.31
IRF3-202ENST00000377135 JTBO76095 146 aa13.11□□□□□ -0.31
IRF3-202ENST00000377135 HNRNPCP07910 306 aaKnown RBP eCLIP13.11□□□□□ -0.31
IRF3-202ENST00000377135 GPX4P36969 197 aaPredicted RBP13.11□□□□□ -0.31
IRF3-202ENST00000377135 AP2S1P53680 142 aaPredicted RBP13.11□□□□□ -0.31
IRF3-202ENST00000377135 EWSR1Q01844 656 aaKnown RBP eCLIP13.11□□□□□ -0.31
IRF3-202ENST00000377135 LRTM2Q8N967 370 aa13.11□□□□□ -0.31
IRF3-202ENST00000377135 CXorf65A6NEN9 183 aa13.1□□□□□ -0.31
IRF3-202ENST00000377135 SFT2D2O95562 160 aa13.1□□□□□ -0.31
IRF3-202ENST00000377135 IL4P05112 153 aa13.1□□□□□ -0.31
IRF3-202ENST00000377135 PSG1P11464 419 aa13.1□□□□□ -0.31
IRF3-202ENST00000377135 INPP1P49441 399 aa13.1□□□□□ -0.31
IRF3-202ENST00000377135 C16orf54Q6UWD8 224 aa13.1□□□□□ -0.31
IRF3-202ENST00000377135 TMEM217Q8N7C4 229 aa13.1□□□□□ -0.31
IRF3-202ENST00000377135 GATAD1Q8WUU5 269 aa13.1□□□□□ -0.31
IRF3-202ENST00000377135 RARRES2Q99969 163 aa13.1□□□□□ -0.31
IRF3-202ENST00000377135 TOMM40O96008 361 aa13.09□□□□□ -0.31
IRF3-202ENST00000377135 SLC25A6P12236 298 aa13.09□□□□□ -0.31
IRF3-202ENST00000377135 DHRS2Q13268 280 aa13.09□□□□□ -0.31
IRF3-202ENST00000377135 PPP1R1AQ13522 171 aa13.09□□□□□ -0.31
IRF3-202ENST00000377135 PMS2P11Q13670 270 aa13.09□□□□□ -0.31
IRF3-202ENST00000377135 USF2Q15853 346 aaPredicted RBP13.09□□□□□ -0.31
IRF3-202ENST00000377135 STHQ8IWL8 128 aa13.09□□□□□ -0.31
IRF3-202ENST00000377135 CENPSQ8N2Z9 138 aa13.09□□□□□ -0.31
IRF3-202ENST00000377135 SRRQ9GZT4 340 aa13.09□□□□□ -0.31
IRF3-202ENST00000377135 TMED3Q9Y3Q3 217 aa13.09□□□□□ -0.31
IRF3-202ENST00000377135 ZFP92A6NM28 416 aa13.08□□□□□ -0.32
IRF3-202ENST00000377135 MED6O75586 246 aa13.08□□□□□ -0.32
IRF3-202ENST00000377135 CA1P00915 261 aaPredicted RBP13.08□□□□□ -0.32
IRF3-202ENST00000377135 HOXB5P09067 269 aa13.08□□□□□ -0.32
IRF3-202ENST00000377135 ZNF688P0C7X2 276 aa13.08□□□□□ -0.32
IRF3-202ENST00000377135 RAB11AP62491 216 aa13.08□□□□□ -0.32
IRF3-202ENST00000377135 GAMTQ14353 236 aa13.08□□□□□ -0.32
IRF3-202ENST00000377135 BAK1Q16611 211 aa13.08□□□□□ -0.32
IRF3-202ENST00000377135 OR11H2Q8NH07 326 aa13.08□□□□□ -0.32
IRF3-202ENST00000377135 DCANP1Q8TF63 244 aa13.08□□□□□ -0.32
IRF3-202ENST00000377135 DNAH1Q9P2D7 4330 aa13.08□□□□□ -0.32
IRF3-202ENST00000377135 IAPPP10997 89 aa13.07□□□□□ -0.32
IRF3-202ENST00000377135 ATF4P18848 351 aaPredicted RBP13.07□□□□□ -0.32
IRF3-202ENST00000377135 OR51G1Q8NGK1 321 aa13.07□□□□□ -0.32
IRF3-202ENST00000377135 GLMPQ8WWB7 406 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms