RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 C11orf71Q6IPW1 123 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 TMEM256Q8N2U0 113 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 NBASA2RRP1 2371 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 TRAV5A0A0B4J249 113 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 TCRBV4S1A1TA0A5B7 111 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 IRF2P14316 349 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 TFPI2P48307 235 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 CNN1P51911 297 aaKnown RBP7.67□□□□□ -1.18
TRIM39-202ENST00000376659 ZNF90Q03938 601 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 CENPWQ5EE01 88 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 HCP5Q6MZN7 132 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 OR1L6Q8NGR2 347 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 TMEM133Q9H2Q1 129 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 SLC17A3O00476 420 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 GP9P14770 177 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 GRNP28799 593 aaKnown RBP7.66□□□□□ -1.18
TRIM39-202ENST00000376659 REG1BP48304 166 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 SGMS2Q8NHU3 365 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 RNF2Q99496 336 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 VKORC1Q9BQB6 163 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 WASHC3Q9Y3C0 194 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 CELSR1Q9NYQ6 3014 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 F2Z2F3 143 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 PRRG2O14669 202 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 DLX1P56177 255 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 PLP1P60201 277 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 CLEC12BQ2HXU8 276 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 PQLC2Q6ZP29 291 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 C19orf35Q6ZS72 473 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 OR5B12Q96R08 314 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 LRFN3Q9BTN0 628 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 IGHV2-26A0A0B4J1V2 119 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 KIR2DL5BA0A0G2JN68 375 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 KIR2DL5BA0A0G2JPC4 375 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 A0A1W2PN81 502 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 ZNF785A8K8V0 405 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 SELENOVP59797 346 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 KCNIP4Q6PIL6 250 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 TMEM136Q6ZRR5 245 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 KIR2DL5AQ8N109 375 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 TMEM116Q8NCL8 245 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 FLYWCH2Q96CP2 140 aaKnown RBP7.66□□□□□ -1.18
TRIM39-202ENST00000376659 TMEM167BQ9NRX6 74 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 KLF12Q9Y4X4 402 aa7.66□□□□□ -1.18
TRIM39-202ENST00000376659 LOC102724200A0A096LPH7 203 aaPredicted RBP7.65□□□□□ -1.18
TRIM39-202ENST00000376659 ISLRO14498 428 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 ERVFC1-1P60608 527 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 CX3CL1P78423 397 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 CFHR4Q92496 578 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 OSTCQ9NRP0 149 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 CLEC5AQ9NY25 188 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 TECRQ9NZ01 308 aaKnown RBP7.65□□□□□ -1.18
TRIM39-202ENST00000376659 IGHV1-69-2A0A0G2JMI3 117 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 CRYBB3P26998 211 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 PSG5Q15238 335 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 GFRALQ6UXV0 394 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 FAM231DQ6ZW35 169 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 ZGRF1Q86YA3 2104 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 ST6GALNAC3Q8NDV1 305 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 WIPF2Q8TF74 440 aaPredicted RBP7.65□□□□□ -1.18
TRIM39-202ENST00000376659 MLST8Q9BVC4 326 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 CSTL1Q9H114 145 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 SPTA1P02549 2419 aa7.65□□□□□ -1.18
TRIM39-202ENST00000376659 ODF3BA8MYP8 253 aa7.65□□□□□ -1.19
TRIM39-202ENST00000376659 VWC2LB2RUY7 222 aa7.65□□□□□ -1.19
TRIM39-202ENST00000376659 C8orf88P0DMB2 117 aa7.65□□□□□ -1.19
TRIM39-202ENST00000376659 Q0VG73 95 aa7.65□□□□□ -1.19
TRIM39-202ENST00000376659 WDR73Q6P4I2 378 aa7.65□□□□□ -1.19
TRIM39-202ENST00000376659 TEX45Q8NA69 505 aa7.65□□□□□ -1.19
TRIM39-202ENST00000376659 WFDC12Q8WWY7 111 aa7.65□□□□□ -1.19
TRIM39-202ENST00000376659 ALKBH7Q9BT30 221 aaPredicted RBP7.65□□□□□ -1.19
TRIM39-202ENST00000376659 CDC42EP3Q9UKI2 254 aa7.65□□□□□ -1.19
TRIM39-202ENST00000376659 MALRD1Q5VYJ5 2156 aa7.65□□□□□ -1.19
TRIM39-202ENST00000376659 BUB1B-PAK6H3BSN5 160 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 ACTL6BO94805 426 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 APOBEC3AP31941 199 aaPredicted RBP7.64□□□□□ -1.19
TRIM39-202ENST00000376659 GDF5OSQ5U4N7 250 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 LHFPL4Q7Z7J7 247 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 GNB1LQ9BYB4 327 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.64□□□□□ -1.19
TRIM39-202ENST00000376659 GOSR1O95249 250 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 APOA2P02652 100 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 ADORA2A-AS1P86434 159 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 ZNF672Q499Z4 452 aaPredicted RBP7.64□□□□□ -1.19
TRIM39-202ENST00000376659 Q6ZWC4 215 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 TRGV9Q99603 122 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 RNASE7Q9H1E1 156 aaKnown RBP7.64□□□□□ -1.19
TRIM39-202ENST00000376659 IGHV1-3A0A0C4DH29 117 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 I3L2K1 104 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 PYYP10082 97 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 Q71RC1 249 aaPredicted RBP7.64□□□□□ -1.19
TRIM39-202ENST00000376659 FAM168AQ92567 244 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 SIGLEC9Q9Y336 463 aa7.64□□□□□ -1.19
TRIM39-202ENST00000376659 B9A039 149 aa7.63□□□□□ -1.19
TRIM39-202ENST00000376659 MRPS12O15235 138 aaKnown RBP7.63□□□□□ -1.19
TRIM39-202ENST00000376659 NDUFB3O43676 98 aa7.63□□□□□ -1.19
TRIM39-202ENST00000376659 CBLN1P23435 193 aa7.63□□□□□ -1.19
TRIM39-202ENST00000376659 LRRC10Q5BKY1 277 aa7.63□□□□□ -1.19
TRIM39-202ENST00000376659 VSTM2AQ8TAG5 236 aa7.63□□□□□ -1.19
TRIM39-202ENST00000376659 CCL17Q92583 94 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms