RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 AWAT1Q58HT5 328 aa17.75■□□□□ 0.43
HLA-C-202ENST00000376237 RPL7L1Q6DKI1 246 aaKnown RBP17.75■□□□□ 0.43
HLA-C-202ENST00000376237 SPSB3Q6PJ21 355 aa17.75■□□□□ 0.43
HLA-C-202ENST00000376237 BTNL8Q6UX41 500 aa17.75■□□□□ 0.43
HLA-C-202ENST00000376237 CLEC19AQ6UXS0 136 aa17.75■□□□□ 0.43
HLA-C-202ENST00000376237 TMEM158Q8WZ71 300 aa17.75■□□□□ 0.43
HLA-C-202ENST00000376237 ZNF471Q9BX82 626 aaPredicted RBP17.75■□□□□ 0.43
HLA-C-202ENST00000376237 TSSC4Q9Y5U2 329 aaPredicted RBP17.75■□□□□ 0.43
HLA-C-202ENST00000376237 SETD2Q9BYW2 2564 aaPredicted RBP17.75■□□□□ 0.43
HLA-C-202ENST00000376237 NUPL2O15504 423 aaKnown RBP17.74■□□□□ 0.43
HLA-C-202ENST00000376237 IGLC1P0CG04 106 aa17.74■□□□□ 0.43
HLA-C-202ENST00000376237 CD28P10747 220 aa17.74■□□□□ 0.43
HLA-C-202ENST00000376237 OR10J1P30954 320 aa17.74■□□□□ 0.43
HLA-C-202ENST00000376237 TRGV9Q99603 122 aa17.74■□□□□ 0.43
HLA-C-202ENST00000376237 C19orf24Q9BVV8 132 aa17.74■□□□□ 0.43
HLA-C-202ENST00000376237 IGKV1OR2-108A0A075B7D4 117 aa17.73■□□□□ 0.43
HLA-C-202ENST00000376237 LGALS1P09382 135 aaKnown RBP17.73■□□□□ 0.43
HLA-C-202ENST00000376237 FGF7P21781 194 aa17.73■□□□□ 0.43
HLA-C-202ENST00000376237 GPR183P32249 361 aa17.73■□□□□ 0.43
HLA-C-202ENST00000376237 SLC51BQ86UW2 128 aa17.73■□□□□ 0.43
HLA-C-202ENST00000376237 PEF1Q9UBV8 284 aaKnown RBP17.73■□□□□ 0.43
HLA-C-202ENST00000376237 OR2T8A6NH00 312 aa17.72■□□□□ 0.43
HLA-C-202ENST00000376237 FABP1P07148 127 aa17.72■□□□□ 0.43
HLA-C-202ENST00000376237 CTSGP08311 255 aa17.72■□□□□ 0.43
HLA-C-202ENST00000376237 KHDC1LQ5JSQ8 128 aa17.72■□□□□ 0.43
HLA-C-202ENST00000376237 C4orf3Q8WVX3 66 aa17.72■□□□□ 0.43
HLA-C-202ENST00000376237 GNB4Q9HAV0 340 aa17.72■□□□□ 0.43
HLA-C-202ENST00000376237 TGOLN2O43493 480 aa17.72■□□□□ 0.43
HLA-C-202ENST00000376237 CAMLGP49069 296 aa17.72■□□□□ 0.43
HLA-C-202ENST00000376237 RUNX1Q01196 453 aa17.72■□□□□ 0.43
HLA-C-202ENST00000376237 C11orf44Q8N8P7 122 aa17.72■□□□□ 0.43
HLA-C-202ENST00000376237 ZNF709Q8N972 641 aa17.72■□□□□ 0.43
HLA-C-202ENST00000376237 CITED2Q99967 270 aaPredicted RBP17.72■□□□□ 0.43
HLA-C-202ENST00000376237 IGKV1D-37A0A075B6S9 117 aa17.71■□□□□ 0.43
HLA-C-202ENST00000376237 C17orf112F2Z3M2 114 aa17.71■□□□□ 0.43
HLA-C-202ENST00000376237 AGPAT2O15120 278 aa17.71■□□□□ 0.43
HLA-C-202ENST00000376237 TPT1P13693 172 aaKnown RBP17.71■□□□□ 0.43
HLA-C-202ENST00000376237 YPEL3P61236 119 aaPredicted RBP17.71■□□□□ 0.43
HLA-C-202ENST00000376237 SELENOTP62341 195 aa17.71■□□□□ 0.43
HLA-C-202ENST00000376237 STOML3Q8TAV4 291 aa17.71■□□□□ 0.43
HLA-C-202ENST00000376237 GNPNAT1Q96EK6 184 aaPredicted RBP17.71■□□□□ 0.43
HLA-C-202ENST00000376237 MGST2Q99735 147 aa17.71■□□□□ 0.43
HLA-C-202ENST00000376237 NPCDR1Q9BY65 106 aa17.71■□□□□ 0.43
HLA-C-202ENST00000376237 ARV1Q9H2C2 271 aa17.71■□□□□ 0.43
HLA-C-202ENST00000376237 KCNIP2Q9NS61 270 aa17.71■□□□□ 0.43
HLA-C-202ENST00000376237 BOLA1Q9Y3E2 137 aa17.71■□□□□ 0.43
HLA-C-202ENST00000376237 I3L521 148 aa17.7■□□□□ 0.42
HLA-C-202ENST00000376237 IGKV1-17P01599 117 aa17.7■□□□□ 0.42
HLA-C-202ENST00000376237 ARL3P36405 182 aa17.7■□□□□ 0.42
HLA-C-202ENST00000376237 HSD17B11Q8NBQ5 300 aa17.7■□□□□ 0.42
HLA-C-202ENST00000376237 OR5B12Q96R08 314 aa17.7■□□□□ 0.42
HLA-C-202ENST00000376237 GINS3Q9BRX5 216 aa17.7■□□□□ 0.42
HLA-C-202ENST00000376237 RELQ04864 619 aaPredicted RBP17.69■□□□□ 0.42
HLA-C-202ENST00000376237 CYP2G1PQ6ZSU1 146 aa17.69■□□□□ 0.42
HLA-C-202ENST00000376237 BAP18Q8IXM2 172 aa17.69■□□□□ 0.42
HLA-C-202ENST00000376237 CHRDL1Q9BU40 450 aa17.69■□□□□ 0.42
HLA-C-202ENST00000376237 SLC45A2Q9UMX9 530 aa17.69■□□□□ 0.42
HLA-C-202ENST00000376237 TIMM9Q9Y5J7 89 aa17.69■□□□□ 0.42
HLA-C-202ENST00000376237 ANKRD34BA5PLL1 514 aa17.68■□□□□ 0.42
HLA-C-202ENST00000376237 GGCTO75223 188 aaKnown RBP17.68■□□□□ 0.42
HLA-C-202ENST00000376237 ADMP35318 185 aa17.68■□□□□ 0.42
HLA-C-202ENST00000376237 RPL29P47914 159 aaKnown RBP17.68■□□□□ 0.42
HLA-C-202ENST00000376237 KRTAP10-3P60369 221 aa17.68■□□□□ 0.42
HLA-C-202ENST00000376237 TIGITQ495A1 244 aa17.68■□□□□ 0.42
HLA-C-202ENST00000376237 KLHL30-AS1Q8NEE0 82 aa17.68■□□□□ 0.42
HLA-C-202ENST00000376237 PSMG3Q9BT73 122 aaPredicted RBP17.68■□□□□ 0.42
HLA-C-202ENST00000376237 GGTLC1Q9BX51 225 aa17.68■□□□□ 0.42
HLA-C-202ENST00000376237 NUDT19A8MXV4 375 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 CFDP00746 253 aaPredicted RBP17.67■□□□□ 0.42
HLA-C-202ENST00000376237 HSPB1P04792 205 aaKnown RBP17.67■□□□□ 0.42
HLA-C-202ENST00000376237 ATP6V0CP27449 155 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 ZNF90Q03938 601 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 NDUFA11Q86Y39 141 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 Q8WTZ3 238 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 PPP5D1E7EU14 171 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 TOMM40O96008 361 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 TRBV12-3P01733 135 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 RD3LP0DJH9 198 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 ZNF616Q08AN1 781 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 EIF5AL1Q6IS14 154 aaKnown RBP17.67■□□□□ 0.42
HLA-C-202ENST00000376237 ZNF600Q6ZNG1 722 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 ST8SIA2Q92186 375 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 RSG1Q9BU20 258 aa17.67■□□□□ 0.42
HLA-C-202ENST00000376237 ATRQ13535 2644 aa17.66■□□□□ 0.42
HLA-C-202ENST00000376237 BMPR1BO00238 502 aa17.66■□□□□ 0.42
HLA-C-202ENST00000376237 PSG1P11464 419 aa17.66■□□□□ 0.42
HLA-C-202ENST00000376237 SERF2P84101 59 aa17.66■□□□□ 0.42
HLA-C-202ENST00000376237 BPIFCQ8NFQ6 507 aa17.66■□□□□ 0.42
HLA-C-202ENST00000376237 CITED1Q99966 193 aa17.66■□□□□ 0.42
HLA-C-202ENST00000376237 SEC11BP0C7V7 166 aa17.65■□□□□ 0.42
HLA-C-202ENST00000376237 RIPPLY3P57055 190 aa17.65■□□□□ 0.42
HLA-C-202ENST00000376237 PRR20EP86478 221 aa17.65■□□□□ 0.42
HLA-C-202ENST00000376237 PRR20CP86479 221 aa17.65■□□□□ 0.42
HLA-C-202ENST00000376237 PRR20DP86480 221 aa17.65■□□□□ 0.42
HLA-C-202ENST00000376237 PRR20BP86481 221 aa17.65■□□□□ 0.42
HLA-C-202ENST00000376237 PRR20AP86496 221 aa17.65■□□□□ 0.42
HLA-C-202ENST00000376237 C18orf65Q6ZTR6 163 aa17.65■□□□□ 0.42
HLA-C-202ENST00000376237 OR51G1Q8NGK1 321 aa17.65■□□□□ 0.42
HLA-C-202ENST00000376237 PXMP4Q9Y6I8 212 aa17.65■□□□□ 0.42
HLA-C-202ENST00000376237 SPP1P10451 314 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms