RNA–Protein interactions for RNA: ENST00000375300.5

SIK3-201, Transcript of SIK family kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIK3, Length 6,213 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-201ENST00000375300 TCRBV4S1A1TA0A5B7 111 aa13.17□□□□□ -0.3
SIK3-201ENST00000375300 NDUFA3O95167 84 aa13.17□□□□□ -0.3
SIK3-201ENST00000375300 IGHV1-46P01743 117 aa13.17□□□□□ -0.3
SIK3-201ENST00000375300 TMEM42Q69YG0 159 aa13.17□□□□□ -0.3
SIK3-201ENST00000375300 TGFAP01135 160 aa13.17□□□□□ -0.3
SIK3-201ENST00000375300 PEF1Q9UBV8 284 aaKnown RBP13.17□□□□□ -0.3
SIK3-201ENST00000375300 STAG3L2P0CL84 134 aa13.17□□□□□ -0.3
SIK3-201ENST00000375300 MEF2CQ06413 473 aaPredicted RBP13.17□□□□□ -0.3
SIK3-201ENST00000375300 PRSS8Q16651 343 aa13.17□□□□□ -0.3
SIK3-201ENST00000375300 Q6P435 159 aa13.17□□□□□ -0.3
SIK3-201ENST00000375300 MLNRO43193 412 aa13.16□□□□□ -0.3
SIK3-201ENST00000375300 AREGP15514 252 aa13.16□□□□□ -0.3
SIK3-201ENST00000375300 FER1L6-AS1Q8NA97 138 aa13.16□□□□□ -0.3
SIK3-201ENST00000375300 GLMPQ8WWB7 406 aa13.16□□□□□ -0.3
SIK3-201ENST00000375300 OSTCQ9NRP0 149 aa13.16□□□□□ -0.3
SIK3-201ENST00000375300 A0A1B0GW64 132 aa13.16□□□□□ -0.3
SIK3-201ENST00000375300 SRSF7Q16629 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
SIK3-201ENST00000375300 CRIM1Q9NZV1 1036 aa13.16□□□□□ -0.3
SIK3-201ENST00000375300 AGMATQ9BSE5 352 aa13.16□□□□□ -0.3
SIK3-201ENST00000375300 NTF4P34130 210 aa13.16□□□□□ -0.3
SIK3-201ENST00000375300 NIT1Q86X76 327 aa13.16□□□□□ -0.3
SIK3-201ENST00000375300 TMEM242Q9NWH2 141 aa13.16□□□□□ -0.3
SIK3-201ENST00000375300 PPP1R27Q86WC6 154 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 PIMREGQ9BSJ6 248 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 STAG3L3P0CL85 134 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 EVI2AP22794 236 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 TMEM14EPQ6UXP3 125 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 IGKV3OR2-268A0A0C4DH90 116 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 TMEM170BQ5T4T1 132 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 SPSB3Q6PJ21 355 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 OTORQ9NRC9 128 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 TRAV1-1A0A0B4J248 108 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 FAM71F2Q6NXP2 309 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 NUDT10Q8NFP7 164 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 ZNF418Q8TF45 676 aaPredicted RBP13.15□□□□□ -0.3
SIK3-201ENST00000375300 NUDT11Q96G61 164 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 GNB1LQ9BYB4 327 aa13.15□□□□□ -0.3
SIK3-201ENST00000375300 IGHV3-11P01762 117 aa13.15□□□□□ -0.31
SIK3-201ENST00000375300 LEPP41159 167 aa13.15□□□□□ -0.31
SIK3-201ENST00000375300 ASCL2Q99929 193 aa13.15□□□□□ -0.31
SIK3-201ENST00000375300 LIME1Q9H400 295 aa13.15□□□□□ -0.31
SIK3-201ENST00000375300 PLXNA2O75051 1894 aa13.15□□□□□ -0.31
SIK3-201ENST00000375300 IGKV1-6A0A0C4DH72 117 aa13.14□□□□□ -0.31
SIK3-201ENST00000375300 FAM159AQ6UWV7 190 aa13.14□□□□□ -0.31
SIK3-201ENST00000375300 MLANAQ16655 118 aa13.14□□□□□ -0.31
SIK3-201ENST00000375300 DMRTC2Q8IXT2 367 aaPredicted RBP13.14□□□□□ -0.31
SIK3-201ENST00000375300 ORMDL3Q8N138 153 aa13.14□□□□□ -0.31
SIK3-201ENST00000375300 COQ2Q96H96 371 aa13.14□□□□□ -0.31
SIK3-201ENST00000375300 A0A1B0GUS0 222 aa13.14□□□□□ -0.31
SIK3-201ENST00000375300 FAM106AQ4KMX7 169 aa13.14□□□□□ -0.31
SIK3-201ENST00000375300 TMEM133Q9H2Q1 129 aa13.14□□□□□ -0.31
SIK3-201ENST00000375300 A0A1W2PRE2 83 aa13.14□□□□□ -0.31
SIK3-201ENST00000375300 RNASE4P34096 147 aaKnown RBP13.14□□□□□ -0.31
SIK3-201ENST00000375300 ACTL10Q5JWF8 245 aa13.14□□□□□ -0.31
SIK3-201ENST00000375300 SFTA2Q6UW10 78 aa13.14□□□□□ -0.31
SIK3-201ENST00000375300 FAM90A2PQ658T7 463 aa13.13□□□□□ -0.31
SIK3-201ENST00000375300 EXOC3-AS1Q8N2X6 119 aa13.13□□□□□ -0.31
SIK3-201ENST00000375300 ALKBH7Q9BT30 221 aaPredicted RBP13.13□□□□□ -0.31
SIK3-201ENST00000375300 FNDC4Q9H6D8 234 aaPredicted RBP13.13□□□□□ -0.31
SIK3-201ENST00000375300 LINC00614P0C842 121 aa13.13□□□□□ -0.31
SIK3-201ENST00000375300 FXYD7P58549 80 aa13.13□□□□□ -0.31
SIK3-201ENST00000375300 VOPP1Q96AW1 172 aa13.13□□□□□ -0.31
SIK3-201ENST00000375300 OR11H12B2RN74 326 aa13.13□□□□□ -0.31
SIK3-201ENST00000375300 H3BUT2 72 aa13.13□□□□□ -0.31
SIK3-201ENST00000375300 OR11H1Q8NG94 326 aa13.13□□□□□ -0.31
SIK3-201ENST00000375300 OR11H2Q8NH07 326 aa13.13□□□□□ -0.31
SIK3-201ENST00000375300 GPR179Q6PRD1 2367 aa13.13□□□□□ -0.31
SIK3-201ENST00000375300 ZNRD1Q9P1U0 126 aa13.13□□□□□ -0.31
SIK3-201ENST00000375300 KIF26AQ9ULI4 1882 aaPredicted RBP13.13□□□□□ -0.31
SIK3-201ENST00000375300 LCN12Q6JVE5 192 aa13.12□□□□□ -0.31
SIK3-201ENST00000375300 RNF125Q96EQ8 232 aa13.12□□□□□ -0.31
SIK3-201ENST00000375300 SCGB3A1Q96QR1 104 aa13.12□□□□□ -0.31
SIK3-201ENST00000375300 SRRM5B3KS81 715 aa13.12□□□□□ -0.31
SIK3-201ENST00000375300 PDLIM4P50479 330 aa13.12□□□□□ -0.31
SIK3-201ENST00000375300 DUX5Q96PT3 197 aa13.12□□□□□ -0.31
SIK3-201ENST00000375300 NBR2O15453 112 aa13.12□□□□□ -0.31
SIK3-201ENST00000375300 CIARTQ8N365 385 aaPredicted RBP13.12□□□□□ -0.31
SIK3-201ENST00000375300 C15orf62A8K5M9 175 aa13.12□□□□□ -0.31
SIK3-201ENST00000375300 TYMSP04818 313 aa13.12□□□□□ -0.31
SIK3-201ENST00000375300 OR10J3Q5JRS4 329 aa13.12□□□□□ -0.31
SIK3-201ENST00000375300 C1orf147Q96MC9 270 aaPredicted RBP13.12□□□□□ -0.31
SIK3-201ENST00000375300 KIR2DL4Q99706 377 aa13.12□□□□□ -0.31
SIK3-201ENST00000375300 MRPL16Q9NX20 251 aaKnown RBP13.12□□□□□ -0.31
SIK3-201ENST00000375300 PSG8Q9UQ74 426 aa13.11□□□□□ -0.31
SIK3-201ENST00000375300 TRAV9-2A0A087WT02 112 aa13.11□□□□□ -0.31
SIK3-201ENST00000375300 TIMM23O14925 209 aa13.11□□□□□ -0.31
SIK3-201ENST00000375300 DEFB104AQ8WTQ1 72 aa13.11□□□□□ -0.31
SIK3-201ENST00000375300 AMMECR1LQ6DCA0 310 aa13.11□□□□□ -0.31
SIK3-201ENST00000375300 DDB2Q92466 427 aa13.11□□□□□ -0.31
SIK3-201ENST00000375300 SCRT1Q9BWW7 348 aa13.11□□□□□ -0.31
SIK3-201ENST00000375300 UBE2L6O14933 153 aa13.11□□□□□ -0.31
SIK3-201ENST00000375300 WFDC12Q8WWY7 111 aa13.11□□□□□ -0.31
SIK3-201ENST00000375300 SOX21Q9Y651 276 aaPredicted RBP13.11□□□□□ -0.31
SIK3-201ENST00000375300 TMEM200BQ69YZ2 307 aa13.11□□□□□ -0.31
SIK3-201ENST00000375300 ZNF585BQ52M93 769 aa13.1□□□□□ -0.31
SIK3-201ENST00000375300 PRR30Q53SZ7 412 aaPredicted RBP13.1□□□□□ -0.31
SIK3-201ENST00000375300 SPCS1Q9Y6A9 102 aa13.1□□□□□ -0.31
SIK3-201ENST00000375300 AKAP6Q13023 2319 aa13.1□□□□□ -0.31
SIK3-201ENST00000375300 C19orf54Q5BKX5 351 aa13.1□□□□□ -0.31
SIK3-201ENST00000375300 RIF1Q5UIP0 2472 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms