RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 DUSP14O95147 198 aaKnown RBP8.49□□□□□ -1.05
PTCH1-204ENST00000375290 TEX43Q6ZNM6 134 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 SEMA5BQ9P283 1151 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 APOBEC3AP31941 199 aaPredicted RBP8.49□□□□□ -1.05
PTCH1-204ENST00000375290 IMMP1LQ96LU5 166 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 SHISA9B4DS77 424 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 POU2AF1Q16633 256 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 KIR3DL3Q8N743 410 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 PLSCR4Q9NRQ2 329 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 PLXNA2O75051 1894 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 ETV2O00321 342 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-204ENST00000375290 NBR2O15453 112 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 C3orf79P0CE67 100 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 MESP2Q0VG99 397 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 AHCTF1Q8WYP5 2266 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 TRGV11A0A075B6L2 103 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 M0R2P5 195 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 CMC4P56277 68 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-204ENST00000375290 PPP1R27Q86WC6 154 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 WFDC1Q9HC57 220 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 SAA2-SAA4A0A096LPE2 208 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 SMAD7O15105 426 aaKnown RBP8.48□□□□□ -1.05
PTCH1-204ENST00000375290 SAA1P0DJI8 122 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-204ENST00000375290 SAA2P0DJI9 122 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-204ENST00000375290 GUSBP1Q15486 140 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 SPSB3Q6PJ21 355 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 ZNF815PA8K554 130 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 TMEM86BQ8N661 226 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 SIGLEC12Q96PQ1 595 aa8.48□□□□□ -1.05
PTCH1-204ENST00000375290 C9orf118A6NHY6 69 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 SRRM5B3KS81 715 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 TMEM171Q8WVE6 324 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 KIR2DL5BA0A0G2JN68 375 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 KIR2DL5BA0A0G2JPC4 375 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 PFN1P07737 140 aaKnown RBP8.47□□□□□ -1.05
PTCH1-204ENST00000375290 SP9P0CG40 484 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 KIR2DL5AQ8N109 375 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 FAM157AC9JC47 383 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 ZIC3O60481 467 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 SNRPCP09234 159 aaKnown RBP8.47□□□□□ -1.05
PTCH1-204ENST00000375290 MLNRO43193 412 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 LINC01565O15544 149 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 TCRAP04437 139 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 PSG8Q9UQ74 426 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 KLK10O43240 276 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 NDUFB8O95169 186 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 ABHD17AQ96GS6 310 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 KLF12Q9Y4X4 402 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 IGHV3-13P01766 116 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 IGHV3-7P01780 117 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 CCL8P80075 99 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 TPTE2P1Q5T6R2 138 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 GFI1BQ5VTD9 330 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 SLC25A15Q9Y619 301 aa8.47□□□□□ -1.05
PTCH1-204ENST00000375290 OR13A1Q8NGR1 328 aa8.46□□□□□ -1.05
PTCH1-204ENST00000375290 TRPM7Q96QT4 1865 aa8.46□□□□□ -1.05
PTCH1-204ENST00000375290 FOXI3A8MTJ6 420 aaPredicted RBP8.46□□□□□ -1.05
PTCH1-204ENST00000375290 GGTLC3B5MD39 225 aa8.46□□□□□ -1.05
PTCH1-204ENST00000375290 ACYP1P07311 99 aa8.46□□□□□ -1.05
PTCH1-204ENST00000375290 MPV17L2Q567V2 206 aa8.46□□□□□ -1.05
PTCH1-204ENST00000375290 SVILO95425 2214 aa8.46□□□□□ -1.05
PTCH1-204ENST00000375290 IGLC2P0DOY2 106 aa8.46□□□□□ -1.05
PTCH1-204ENST00000375290 IGLC3P0DOY3 106 aa8.46□□□□□ -1.05
PTCH1-204ENST00000375290 KIR3DS1Q14943 382 aa8.46□□□□□ -1.05
PTCH1-204ENST00000375290 PPDPFLQ8WWR9 84 aa8.46□□□□□ -1.05
PTCH1-204ENST00000375290 C11orf52Q96A22 123 aa8.46□□□□□ -1.05
PTCH1-204ENST00000375290 IGHV2-26A0A0B4J1V2 119 aa8.46□□□□□ -1.06
PTCH1-204ENST00000375290 NUP35Q8NFH5 326 aa8.46□□□□□ -1.06
PTCH1-204ENST00000375290 LINC00477Q96M19 166 aa8.46□□□□□ -1.06
PTCH1-204ENST00000375290 A0A0A6YYD4 124 aa8.46□□□□□ -1.06
PTCH1-204ENST00000375290 IGKV1D-13A0A0B4J2D9 117 aa8.46□□□□□ -1.06
PTCH1-204ENST00000375290 IGKV1-13P0DP09 117 aa8.46□□□□□ -1.06
PTCH1-204ENST00000375290 RPL39P5Q59GN2 51 aa8.46□□□□□ -1.06
PTCH1-204ENST00000375290 SPTA1P02549 2419 aa8.46□□□□□ -1.06
PTCH1-204ENST00000375290 IGHV3OR15-7A0A075B7D8 119 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 LGALS9BQ3B8N2 356 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 LGALS9CQ6DKI2 356 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 TMEM141Q96I45 108 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 CRXO43186 299 aaPredicted RBP8.45□□□□□ -1.06
PTCH1-204ENST00000375290 C9orf139Q6ZV77 190 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 C18orf15Q96N68 181 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 TMEM167AQ8TBQ9 72 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 PLAUP00749 431 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 COX8AP10176 69 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 CCL4P13236 92 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 CFHR1Q03591 330 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 CLEC2AQ6UVW9 174 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 CD300EQ496F6 205 aaPredicted RBP8.45□□□□□ -1.06
PTCH1-204ENST00000375290 SNHG12Q9BXW3 62 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 LOC105371242A0A075B767 164 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 RAMP3O60896 148 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 PSG3Q16557 428 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 TPRX1Q8N7U7 411 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 MST1LQ2TV78 715 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 PRSS12P56730 875 aa8.45□□□□□ -1.06
PTCH1-204ENST00000375290 POLR3KQ9Y2Y1 108 aaPredicted RBP8.45□□□□□ -1.06
PTCH1-204ENST00000375290 K7EP34 96 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 ATP6V0BQ99437 205 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 IGHV2OR16-5A0A0B4J2B6 119 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 A0A1W2PR77 199 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms