RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 RNF152Q8N8N0 203 aa13.58□□□□□ -0.24
PFDN6-201ENST00000374606 TMEM116Q8NCL8 245 aa13.58□□□□□ -0.24
PFDN6-201ENST00000374606 ZNF502Q8TBZ5 544 aa13.58□□□□□ -0.24
PFDN6-201ENST00000374606 WIPF2Q8TF74 440 aaPredicted RBP13.58□□□□□ -0.24
PFDN6-201ENST00000374606 NPIPB3Q92617 1050 aa13.58□□□□□ -0.24
PFDN6-201ENST00000374606 WDR61Q9GZS3 305 aaKnown RBP13.58□□□□□ -0.24
PFDN6-201ENST00000374606 GNG7O60262 68 aa13.57□□□□□ -0.24
PFDN6-201ENST00000374606 CLN5O75503 358 aa13.57□□□□□ -0.24
PFDN6-201ENST00000374606 SCGB2A1O75556 95 aa13.57□□□□□ -0.24
PFDN6-201ENST00000374606 TPT1P13693 172 aaKnown RBP13.57□□□□□ -0.24
PFDN6-201ENST00000374606 PROK1P58294 105 aa13.57□□□□□ -0.24
PFDN6-201ENST00000374606 TEPPQ6URK8 271 aa13.57□□□□□ -0.24
PFDN6-201ENST00000374606 BTNL8Q6UX41 500 aa13.57□□□□□ -0.24
PFDN6-201ENST00000374606 SLC51BQ86UW2 128 aa13.57□□□□□ -0.24
PFDN6-201ENST00000374606 MYOZ3Q8TDC0 251 aa13.57□□□□□ -0.24
PFDN6-201ENST00000374606 WFDC12Q8WWY7 111 aa13.57□□□□□ -0.24
PFDN6-201ENST00000374606 CCDC140Q96MF4 163 aa13.57□□□□□ -0.24
PFDN6-201ENST00000374606 TXN2Q99757 166 aa13.57□□□□□ -0.24
PFDN6-201ENST00000374606 PARD6GQ9BYG4 376 aaPredicted RBP13.57□□□□□ -0.24
PFDN6-201ENST00000374606 GAR1Q9NY12 217 aaKnown RBP13.57□□□□□ -0.24
PFDN6-201ENST00000374606 ZFP92A6NM28 416 aa13.56□□□□□ -0.24
PFDN6-201ENST00000374606 M0QZ24 198 aa13.56□□□□□ -0.24
PFDN6-201ENST00000374606 MPDU1O75352 247 aa13.56□□□□□ -0.24
PFDN6-201ENST00000374606 IGHV3-11P01762 117 aa13.56□□□□□ -0.24
PFDN6-201ENST00000374606 FCGR2BP31994 310 aaPredicted RBP13.56□□□□□ -0.24
PFDN6-201ENST00000374606 RAB31Q13636 194 aa13.56□□□□□ -0.24
PFDN6-201ENST00000374606 KHDC1LQ5JSQ8 128 aa13.56□□□□□ -0.24
PFDN6-201ENST00000374606 THAP8Q8NA92 274 aa13.56□□□□□ -0.24
PFDN6-201ENST00000374606 HSD17B11Q8NBQ5 300 aa13.56□□□□□ -0.24
PFDN6-201ENST00000374606 STOML3Q8TAV4 291 aa13.56□□□□□ -0.24
PFDN6-201ENST00000374606 TRAV30A0A087WSZ9 112 aa13.55□□□□□ -0.24
PFDN6-201ENST00000374606 OR10J1P30954 320 aa13.55□□□□□ -0.24
PFDN6-201ENST00000374606 GPR183P32249 361 aa13.55□□□□□ -0.24
PFDN6-201ENST00000374606 RUNX1Q01196 453 aa13.55□□□□□ -0.24
PFDN6-201ENST00000374606 FAM209BQ5JX69 171 aa13.55□□□□□ -0.24
PFDN6-201ENST00000374606 HIST2H2BDQ6DRA6 164 aa13.55□□□□□ -0.24
PFDN6-201ENST00000374606 ZNF491Q8N8L2 437 aa13.55□□□□□ -0.24
PFDN6-201ENST00000374606 UBE2E2Q96LR5 201 aa13.55□□□□□ -0.24
PFDN6-201ENST00000374606 ATP6V0BQ99437 205 aa13.55□□□□□ -0.24
PFDN6-201ENST00000374606 NPCDR1Q9BY65 106 aa13.55□□□□□ -0.24
PFDN6-201ENST00000374606 KCNIP2Q9NS61 270 aa13.55□□□□□ -0.24
PFDN6-201ENST00000374606 LSM4Q9Y4Z0 139 aaKnown RBP13.55□□□□□ -0.24
PFDN6-201ENST00000374606 IGKV1OR2-108A0A075B7D4 117 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 OR2T8A6NH00 312 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 C17orf112F2Z3M2 114 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 F8W735 103 aaPredicted RBP13.54□□□□□ -0.24
PFDN6-201ENST00000374606 IGLC1P0CG04 106 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 CAMLGP49069 296 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 KIAA0141Q14154 515 aaPredicted RBP13.54□□□□□ -0.24
PFDN6-201ENST00000374606 TCTEX1D4Q5JR98 221 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 ZNF343Q6P1L6 599 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 CLEC19AQ6UXS0 136 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 BAP18Q8IXM2 172 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 ZNF709Q8N972 641 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 ST8SIA2Q92186 375 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 TRGV9Q99603 122 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 MGST2Q99735 147 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 GGTLC1Q9BX51 225 aa13.54□□□□□ -0.24
PFDN6-201ENST00000374606 IGKV1D-37A0A075B6S9 117 aa13.53□□□□□ -0.24
PFDN6-201ENST00000374606 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.53□□□□□ -0.24
PFDN6-201ENST00000374606 TCRBV4S1A1TA0A5B7 111 aa13.53□□□□□ -0.24
PFDN6-201ENST00000374606 AGPAT2O15120 278 aa13.53□□□□□ -0.24
PFDN6-201ENST00000374606 NUPL2O15504 423 aaKnown RBP13.53□□□□□ -0.24
PFDN6-201ENST00000374606 FABP1P07148 127 aa13.53□□□□□ -0.24
PFDN6-201ENST00000374606 CD28P10747 220 aa13.53□□□□□ -0.24
PFDN6-201ENST00000374606 ATP6V0CP27449 155 aa13.53□□□□□ -0.24
PFDN6-201ENST00000374606 GNPNAT1Q96EK6 184 aaPredicted RBP13.53□□□□□ -0.24
PFDN6-201ENST00000374606 OR5B12Q96R08 314 aa13.53□□□□□ -0.24
PFDN6-201ENST00000374606 CITED1Q99966 193 aa13.53□□□□□ -0.24
PFDN6-201ENST00000374606 GINS3Q9BRX5 216 aa13.53□□□□□ -0.24
PFDN6-201ENST00000374606 RSG1Q9BU20 258 aa13.53□□□□□ -0.24
PFDN6-201ENST00000374606 ARV1Q9H2C2 271 aa13.53□□□□□ -0.24
PFDN6-201ENST00000374606 GNB4Q9HAV0 340 aa13.53□□□□□ -0.24
PFDN6-201ENST00000374606 TGOLN2O43493 480 aa13.52□□□□□ -0.25
PFDN6-201ENST00000374606 CLEC3BP05452 202 aa13.52□□□□□ -0.25
PFDN6-201ENST00000374606 LGALS1P09382 135 aaKnown RBP13.52□□□□□ -0.25
PFDN6-201ENST00000374606 ARL3P36405 182 aa13.52□□□□□ -0.25
PFDN6-201ENST00000374606 CDX1P47902 265 aaPredicted RBP13.52□□□□□ -0.25
PFDN6-201ENST00000374606 TIGITQ495A1 244 aa13.52□□□□□ -0.25
PFDN6-201ENST00000374606 SPSB3Q6PJ21 355 aa13.52□□□□□ -0.25
PFDN6-201ENST00000374606 CYP2G1PQ6ZSU1 146 aa13.52□□□□□ -0.25
PFDN6-201ENST00000374606 C11orf44Q8N8P7 122 aa13.52□□□□□ -0.25
PFDN6-201ENST00000374606 TIMM9Q9Y5J7 89 aa13.52□□□□□ -0.25
PFDN6-201ENST00000374606 ANKRD34BA5PLL1 514 aa13.51□□□□□ -0.25
PFDN6-201ENST00000374606 IGKV1-17P01599 117 aa13.51□□□□□ -0.25
PFDN6-201ENST00000374606 SELENOTP62341 195 aa13.51□□□□□ -0.25
PFDN6-201ENST00000374606 C4orf3Q8WVX3 66 aa13.51□□□□□ -0.25
PFDN6-201ENST00000374606 PSMG3Q9BT73 122 aaPredicted RBP13.51□□□□□ -0.25
PFDN6-201ENST00000374606 SH3BGRL3Q9H299 93 aa13.51□□□□□ -0.25
PFDN6-201ENST00000374606 PEF1Q9UBV8 284 aaKnown RBP13.51□□□□□ -0.25
PFDN6-201ENST00000374606 NUDT19A8MXV4 375 aa13.5□□□□□ -0.25
PFDN6-201ENST00000374606 PPP5D1E7EU14 171 aa13.5□□□□□ -0.25
PFDN6-201ENST00000374606 TRBV12-3P01733 135 aa13.5□□□□□ -0.25
PFDN6-201ENST00000374606 CTSGP08311 255 aa13.5□□□□□ -0.25
PFDN6-201ENST00000374606 YPEL3P61236 119 aaPredicted RBP13.5□□□□□ -0.25
PFDN6-201ENST00000374606 ZNF90Q03938 601 aa13.5□□□□□ -0.25
PFDN6-201ENST00000374606 MIC13Q5XKP0 118 aa13.5□□□□□ -0.25
PFDN6-201ENST00000374606 EIF5AL1Q6IS14 154 aaKnown RBP13.5□□□□□ -0.25
PFDN6-201ENST00000374606 KLHL30-AS1Q8NEE0 82 aa13.5□□□□□ -0.25
PFDN6-201ENST00000374606 CHRDL1Q9BU40 450 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms