RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CMTM2Q8TAZ6 248 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 C22orf15Q8WYQ4 148 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 IGF2BP2-AS1Q96M15 143 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 TMEM133Q9H2Q1 129 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 CADP27708 2225 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 CGB1A6NKQ9 187 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 E7EQL1 145 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 CORTO00230 105 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 CD3EP07766 207 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 GATA2P23769 480 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-203ENST00000374490 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
HMGCL-203ENST00000374490 ADORA2A-AS1P86434 159 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 Q0VG73 95 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 MLANAQ16655 118 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 LBHQ53QV2 105 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-203ENST00000374490 DMRTC2Q8IXT2 367 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-203ENST00000374490 ZCCHC24Q8N2G6 241 aaKnown RBP11.24□□□□□ -0.61
HMGCL-203ENST00000374490 OR5AU1Q8NGC0 362 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 OR2T6Q8NHC8 308 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 C14orf144Q96I85 54 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 PAXXQ9BUH6 204 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 CDC42EP3Q9UKI2 254 aa11.24□□□□□ -0.61
HMGCL-203ENST00000374490 UTP20O75691 2785 aaKnown RBP11.23□□□□□ -0.61
HMGCL-203ENST00000374490 ZNF705GA8MUZ8 300 aaPredicted RBP11.23□□□□□ -0.61
HMGCL-203ENST00000374490 RBP4P02753 201 aa11.23□□□□□ -0.61
HMGCL-203ENST00000374490 CRISP2P16562 243 aa11.23□□□□□ -0.61
HMGCL-203ENST00000374490 CX3CL1P78423 397 aa11.23□□□□□ -0.61
HMGCL-203ENST00000374490 NPIPB3Q92617 1050 aa11.23□□□□□ -0.61
HMGCL-203ENST00000374490 TRGV9Q99603 122 aa11.23□□□□□ -0.61
HMGCL-203ENST00000374490 CHRDL1Q9BU40 450 aa11.23□□□□□ -0.61
HMGCL-203ENST00000374490 PRO1933Q9H354 126 aa11.23□□□□□ -0.61
HMGCL-203ENST00000374490 FCN1O00602 326 aa11.22□□□□□ -0.61
HMGCL-203ENST00000374490 CRYGCP07315 174 aa11.22□□□□□ -0.61
HMGCL-203ENST00000374490 CBLN1P23435 193 aa11.22□□□□□ -0.61
HMGCL-203ENST00000374490 COMPP49747 757 aaPredicted RBP11.22□□□□□ -0.61
HMGCL-203ENST00000374490 OR5I1Q13606 314 aa11.22□□□□□ -0.61
HMGCL-203ENST00000374490 BEND2Q8NDZ0 799 aa11.22□□□□□ -0.61
HMGCL-203ENST00000374490 TMEM190Q8WZ59 177 aa11.22□□□□□ -0.61
HMGCL-203ENST00000374490 PERPQ96FX8 193 aa11.22□□□□□ -0.61
HMGCL-203ENST00000374490 FNDC4Q9H6D8 234 aaPredicted RBP11.22□□□□□ -0.61
HMGCL-203ENST00000374490 ZNF355PQ9NSJ1 428 aa11.22□□□□□ -0.61
HMGCL-203ENST00000374490 SNURFLB1AK76 121 aa11.21□□□□□ -0.61
HMGCL-203ENST00000374490 SLC25A17O43808 307 aa11.21□□□□□ -0.61
HMGCL-203ENST00000374490 IER3P46695 156 aa11.21□□□□□ -0.61
HMGCL-203ENST00000374490 RPL27AP46776 148 aaKnown RBP11.21□□□□□ -0.61
HMGCL-203ENST00000374490 RAB4BP61018 213 aa11.21□□□□□ -0.61
HMGCL-203ENST00000374490 PRSS8Q16651 343 aa11.21□□□□□ -0.61
HMGCL-203ENST00000374490 IBA57Q5T440 356 aaKnown RBP11.21□□□□□ -0.61
HMGCL-203ENST00000374490 RASL11AQ6T310 242 aa11.21□□□□□ -0.61
HMGCL-203ENST00000374490 FAM231DQ6ZW35 169 aa11.21□□□□□ -0.61
HMGCL-203ENST00000374490 OR8I2Q8N0Y5 310 aa11.21□□□□□ -0.61
HMGCL-203ENST00000374490 ZNF664Q8N3J9 261 aa11.21□□□□□ -0.61
HMGCL-203ENST00000374490 SMIM12Q96EX1 92 aa11.21□□□□□ -0.61
HMGCL-203ENST00000374490 MS4A10Q96PG2 267 aa11.21□□□□□ -0.61
HMGCL-203ENST00000374490 AMMECR1Q9Y4X0 333 aaPredicted RBP11.21□□□□□ -0.61
HMGCL-203ENST00000374490 HIVEP3Q5T1R4 2406 aa11.21□□□□□ -0.62
HMGCL-203ENST00000374490 IGKV1D-37A0A075B6S9 117 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 A0A1W2PPI3 338 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 SMIM27A0A1W2PRY6 76 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 A8MWP6 167 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 E7EUB6 86 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 IGLV2-8P01709 118 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 HLA-DQA1P01909 254 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 DIAPH2-AS1Q14236 149 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 C10orf55Q5SWW7 151 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 TMEM256Q8N2U0 113 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 NDUFAF3Q9BU61 184 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 NAGKQ9UJ70 344 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 IGLC7A0M8Q6 106 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 PEX7O00628 323 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 ENSAO43768 121 aaKnown RBP11.2□□□□□ -0.62
HMGCL-203ENST00000374490 AMY1AP04745 511 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 CRYGBP07316 175 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 OR10J3Q5JRS4 329 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 ZNF329Q86UD4 541 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 LINC01560Q8TB33 94 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 RNF5Q99942 180 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 TNFRSF19Q9NS68 423 aa11.2□□□□□ -0.62
HMGCL-203ENST00000374490 PLCE1Q9P212 2302 aa11.19□□□□□ -0.62
HMGCL-203ENST00000374490 IGHV2-26A0A0B4J1V2 119 aa11.19□□□□□ -0.62
HMGCL-203ENST00000374490 TRAV5A0A0B4J249 113 aa11.19□□□□□ -0.62
HMGCL-203ENST00000374490 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.19□□□□□ -0.62
HMGCL-203ENST00000374490 IZUMO1RA6ND01 250 aa11.19□□□□□ -0.62
HMGCL-203ENST00000374490 SCGB1D1O95968 90 aa11.19□□□□□ -0.62
HMGCL-203ENST00000374490 MGST1P10620 155 aaKnown RBP11.19□□□□□ -0.62
HMGCL-203ENST00000374490 MRGPRG-AS1Q2M3A8 158 aa11.19□□□□□ -0.62
HMGCL-203ENST00000374490 PATE2Q6UY27 113 aa11.19□□□□□ -0.62
HMGCL-203ENST00000374490 BAGE3Q86Y29 109 aa11.19□□□□□ -0.62
HMGCL-203ENST00000374490 BAGE2Q86Y30 109 aa11.19□□□□□ -0.62
HMGCL-203ENST00000374490 C11orf42Q8N5U0 333 aa11.19□□□□□ -0.62
HMGCL-203ENST00000374490 SRSF8Q9BRL6 282 aaKnown RBP11.19□□□□□ -0.62
HMGCL-203ENST00000374490 CLEC7AQ9BXN2 247 aa11.19□□□□□ -0.62
HMGCL-203ENST00000374490 RNASE7Q9H1E1 156 aaKnown RBP11.19□□□□□ -0.62
HMGCL-203ENST00000374490 PLP1P60201 277 aa11.18□□□□□ -0.62
HMGCL-203ENST00000374490 SSBP2P81877 361 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-203ENST00000374490 MORN5Q5VZ52 161 aa11.18□□□□□ -0.62
HMGCL-203ENST00000374490 TMEM136Q6ZRR5 245 aa11.18□□□□□ -0.62
HMGCL-203ENST00000374490 LINC00469Q8N7U9 141 aa11.18□□□□□ -0.62
HMGCL-203ENST00000374490 TMEM116Q8NCL8 245 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms