RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LYNX1P0DP58 116 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 CD33P20138 364 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 SPSB3Q6PJ21 355 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 KIAA1217Q5T5P2 1943 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 MCM3APO60318 1980 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 LILRA1O75019 489 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 MINOS1Q5TGZ0 78 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 MINOS1-NBL1R4GNA1 71 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 IL18BPO95998 194 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 EFNA4P52798 201 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
VCL-202ENST00000372755 RASL10AQ92737 203 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
VCL-202ENST00000372755 RPUSD1Q9UJJ7 312 aaKnown RBP9.54□□□□□ -0.88
VCL-202ENST00000372755 VMO1Q7Z5L0 202 aa9.53□□□□□ -0.88
VCL-202ENST00000372755 RP1L1Q8IWN7 2480 aaPredicted RBP9.53□□□□□ -0.88
VCL-202ENST00000372755 LGALS1P09382 135 aaKnown RBP9.53□□□□□ -0.88
VCL-202ENST00000372755 TIMP3P35625 211 aa9.53□□□□□ -0.88
VCL-202ENST00000372755 C1QL4Q86Z23 238 aa9.53□□□□□ -0.88
VCL-202ENST00000372755 COL24A1Q17RW2 1714 aa9.53□□□□□ -0.88
VCL-202ENST00000372755 SRD5A1P18405 259 aa9.53□□□□□ -0.88
VCL-202ENST00000372755 TMEM242Q9NWH2 141 aa9.53□□□□□ -0.88
VCL-202ENST00000372755 NPIPB5A8MRT5 1133 aa9.53□□□□□ -0.88
VCL-202ENST00000372755 F8WEM9 126 aa9.53□□□□□ -0.88
VCL-202ENST00000372755 TBX6O95947 436 aaPredicted RBP9.53□□□□□ -0.88
VCL-202ENST00000372755 TFF1P04155 84 aa9.53□□□□□ -0.88
VCL-202ENST00000372755 FOXL1Q12952 345 aa9.53□□□□□ -0.88
VCL-202ENST00000372755 ZNF672Q499Z4 452 aaPredicted RBP9.53□□□□□ -0.88
VCL-202ENST00000372755 TREML4Q6UXN2 200 aa9.53□□□□□ -0.88
VCL-202ENST00000372755 TDRD15B5MCY1 1934 aaKnown RBP9.52□□□□□ -0.88
VCL-202ENST00000372755 IGHV3-64A0A075B6Q5 118 aa9.52□□□□□ -0.88
VCL-202ENST00000372755 FGF16O43320 207 aa9.52□□□□□ -0.88
VCL-202ENST00000372755 C15orf32Q32M92 178 aa9.52□□□□□ -0.88
VCL-202ENST00000372755 GAGE13Q4V321 117 aa9.52□□□□□ -0.88
VCL-202ENST00000372755 RASL11AQ6T310 242 aa9.52□□□□□ -0.88
VCL-202ENST00000372755 C20orf204Q6ZNR8 217 aa9.52□□□□□ -0.88
VCL-202ENST00000372755 TMEM105Q8N8V8 129 aa9.52□□□□□ -0.88
VCL-202ENST00000372755 SIGMAR1Q99720 223 aa9.52□□□□□ -0.88
VCL-202ENST00000372755 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 ZFP36L1Q07352 338 aaKnown RBP9.52□□□□□ -0.89
VCL-202ENST00000372755 LY6G6FQ5SQ64 297 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 TPTE2P1Q5T6R2 138 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 SAMD5Q5TGI4 173 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 C9orf139Q6ZV77 190 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 MAP1BP46821 2468 aaKnown RBP9.52□□□□□ -0.89
VCL-202ENST00000372755 IGKV2-40A0A087WW87 121 aaPredicted RBP9.52□□□□□ -0.89
VCL-202ENST00000372755 IGKV2D-40P01614 121 aaPredicted RBP9.52□□□□□ -0.89
VCL-202ENST00000372755 BTCP35070 178 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 ZCCHC24Q8N2G6 241 aaKnown RBP9.52□□□□□ -0.89
VCL-202ENST00000372755 GATD1Q8NB37 220 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 WFDC12Q8WWY7 111 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 OVOL2Q9BRP0 275 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 TRAV5A0A0B4J249 113 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 A0A1B0GWJ7 208 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 TEX43Q6ZNM6 134 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 SPACA3Q8IXA5 215 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 OR10W1Q8NGF6 305 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 TRBV7-1A0A0A6YYK4 115 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 PAX4O43316 350 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 IGHV1-8P0DP01 117 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 CRYGSP22914 178 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 WFDC1Q9HC57 220 aa9.52□□□□□ -0.89
VCL-202ENST00000372755 SRRM5B3KS81 715 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 ZNF876PQ49A33 203 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 HEPN1Q6WQI6 88 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 ASCL4Q6XD76 172 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 C11orf44Q8N8P7 122 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 VWCEQ96DN2 955 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 TRGV9Q99603 122 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 SLC25A39Q9BZJ4 359 aaPredicted RBP9.51□□□□□ -0.89
VCL-202ENST00000372755 LTBP4Q8N2S1 1624 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 MLNRO43193 412 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 HIST1H2BKO60814 126 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 HIST1H2BJP06899 126 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 HIST1H2BOP23527 126 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 HIST1H2BBP33778 126 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 HIST1H2BDP58876 126 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 HIST1H2BCP62807 126 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 HIST2H2BEQ16778 126 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.51□□□□□ -0.89
VCL-202ENST00000372755 ATRAIDQ6UW56 229 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 HIST1H2BHQ93079 126 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 HIST1H2BNQ99877 126 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 HIST1H2BMQ99879 126 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 PLSCR4Q9NRQ2 329 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 IGHV1-3A0A0C4DH29 117 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 GZMBP10144 247 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 LTBRP36941 435 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 LYPD3O95274 346 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 ZNF138P52744 262 aa9.51□□□□□ -0.89
VCL-202ENST00000372755 SRSF3P84103 164 aaKnown RBP9.51□□□□□ -0.89
VCL-202ENST00000372755 LINC00477Q96M19 166 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 TRGV1A0A0A0MS02 117 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 A0A0A6YYD4 124 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 PINLYPA6NC86 204 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 PMS2P5A8MQ11 134 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 H0YIZ8 118 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 TMEM200BQ69YZ2 307 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 GGTLC1Q9BX51 225 aa9.5□□□□□ -0.89
VCL-202ENST00000372755 C1QTNF4Q9BXJ3 329 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms