RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FOXL1Q12952 345 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 TMEM54Q969K7 222 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 SRSF8Q9BRL6 282 aaKnown RBP11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 NPIPB11E5RHQ5 1161 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 K7EP34 96 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 NBEAP1P0C6P0 100 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 AMELYQ99218 206 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 C5orf66Q9H5L9 145 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 hCG_38984A0A1B0GV85 526 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 hDV102S1A0JD36 115 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 CD28P10747 220 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 SNRPD3P62318 126 aaKnown RBP11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 WFDC6Q9BQY6 131 aa11.78□□□□□ -0.52
RAPGEF1-202ENST00000372190 LINC00271P0C7V0 271 aa11.77□□□□□ -0.52
RAPGEF1-202ENST00000372190 CCL1P22362 96 aa11.77□□□□□ -0.52
RAPGEF1-202ENST00000372190 FGF12P61328 243 aa11.77□□□□□ -0.52
RAPGEF1-202ENST00000372190 TMEM42Q69YG0 159 aa11.77□□□□□ -0.52
RAPGEF1-202ENST00000372190 GNLYP22749 145 aa11.77□□□□□ -0.52
RAPGEF1-202ENST00000372190 IGLV3-12A0A075B6K2 115 aa11.77□□□□□ -0.53
RAPGEF1-202ENST00000372190 TMEM229AB2RXF0 380 aa11.77□□□□□ -0.53
RAPGEF1-202ENST00000372190 E9PLN8 166 aa11.77□□□□□ -0.53
RAPGEF1-202ENST00000372190 UNQ9370/PRO34162Q6UXP9 181 aa11.77□□□□□ -0.53
RAPGEF1-202ENST00000372190 DCTN5Q9BTE1 182 aa11.77□□□□□ -0.53
RAPGEF1-202ENST00000372190 CCL20P78556 96 aa11.77□□□□□ -0.53
RAPGEF1-202ENST00000372190 C9orf106Q8NAJ2 232 aa11.77□□□□□ -0.53
RAPGEF1-202ENST00000372190 TMEM243Q9BU79 118 aa11.77□□□□□ -0.53
RAPGEF1-202ENST00000372190 PAX4O43316 350 aa11.77□□□□□ -0.53
RAPGEF1-202ENST00000372190 PAX1P15863 534 aa11.77□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM106AQ4KMX7 169 aa11.77□□□□□ -0.53
RAPGEF1-202ENST00000372190 ARPC1AQ92747 370 aa11.77□□□□□ -0.53
RAPGEF1-202ENST00000372190 LOC102723996A0A087X1L8 192 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 PIN1P1O15428 100 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 TEX45Q8NA69 505 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 NPIPB3Q92617 1050 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 DUX5Q96PT3 197 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 CACNG8Q8WXS5 425 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 LEPROTO15243 131 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 NPC2P61916 151 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 NABP1Q96AH0 204 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 SCTP09683 121 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 NPPCP23582 126 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 PRADC1Q9BSG0 188 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 THADAQ6YHU6 1953 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 ABCA7Q8IZY2 2146 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 THY1P04216 161 aa11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 C1orf162Q8NEQ5 155 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF1-202ENST00000372190 IGLV1-36A0A0B4J1U3 117 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 A0A0U1RRA0 63 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 MPV17P39210 176 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 TEX38Q6PEX7 206 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 MRPS18CQ9Y3D5 142 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 CABIN1Q9Y6J0 2220 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A10PA6NDY2 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A18PA6NE21 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A16PA6NEW6 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A20PA6NIJ5 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A8PA6NJQ4 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A7PA6NKC0 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A22PA8MWA6 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A12PA8MX19 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A5PA8MXJ8 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A23PA8MXZ1 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 IQCF6A8MYZ5 107 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 ZIC3O60481 467 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 WNT2P09544 360 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A15PP0C7V4 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A13PP0C7W8 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A14PP0C7W9 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 FAM90A24PP0C7X0 464 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 MTCL1Q9Y4B5 1905 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 PF4P02776 101 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 ETDBQ3ZM63 59 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 RNASE7Q9H1E1 156 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 TCF19Q9Y242 345 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 TRAV13-1A0A0B4J241 112 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 TGFBR3LH3BV60 316 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 IGFBP2P18065 325 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 LAGE3Q14657 143 aa11.75□□□□□ -0.53
RAPGEF1-202ENST00000372190 IGHV3-72A0A0B4J1Y9 119 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 SRD5A1P18405 259 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 C20orf144Q9BQM9 153 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 SNHG12Q9BXW3 62 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 U3KQE9 123 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 CDKN1AP38936 164 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 GNG5P63218 68 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 SPXQ9BT56 116 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 IGHV3-64A0A075B6Q5 118 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 ZXDCQ2QGD7 858 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 IDI2-AS1Q9NZ38 188 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 LHFPL6Q9Y693 200 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 RP1L1Q8IWN7 2480 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 NINQ8N4C6 2090 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 IGHMP01871 453 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 C3orf79P0CE67 100 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 HAMPP81172 84 aa11.74□□□□□ -0.53
RAPGEF1-202ENST00000372190 CECR9P0C854 216 aa11.73□□□□□ -0.53
RAPGEF1-202ENST00000372190 CSRP3P50461 194 aa11.73□□□□□ -0.53
RAPGEF1-202ENST00000372190 CENPVQ7Z7K6 275 aaPredicted RBP11.73□□□□□ -0.53
RAPGEF1-202ENST00000372190 ASCC3Q8N3C0 2202 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms