RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 COPZ2Q9P299 210 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 KLK11Q9UBX7 282 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 X6R8D5 127 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 IGHV4-4A0A075B6R2 117 aa7.49□□□□□ -1.21
CLRN3-201ENST00000368671 TRAV10A0A0B4J240 114 aa7.49□□□□□ -1.21
CLRN3-201ENST00000368671 DHRS2Q13268 280 aa7.49□□□□□ -1.21
CLRN3-201ENST00000368671 SCGB2B2Q4G0G5 96 aa7.49□□□□□ -1.21
CLRN3-201ENST00000368671 ZNF767PQ75MW2 155 aa7.49□□□□□ -1.21
CLRN3-201ENST00000368671 ARRDC1Q8N5I2 433 aa7.49□□□□□ -1.21
CLRN3-201ENST00000368671 OR52I2Q8NH67 350 aa7.49□□□□□ -1.21
CLRN3-201ENST00000368671 DCANP1Q8TF63 244 aa7.49□□□□□ -1.21
CLRN3-201ENST00000368671 FUNDC2Q9BWH2 189 aa7.49□□□□□ -1.21
CLRN3-201ENST00000368671 HERC2O95714 4834 aa7.49□□□□□ -1.21
CLRN3-201ENST00000368671 DNAH10Q8IVF4 4471 aa7.49□□□□□ -1.21
CLRN3-201ENST00000368671 TRAV30A0A087WSZ9 112 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 RPS10-NUDT3A0A1W2PQS6 291 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 ZNF705EA8MWA4 302 aaPredicted RBP7.48□□□□□ -1.21
CLRN3-201ENST00000368671 TNFAIP8O95379 198 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 HNRNPCP07910 306 aaKnown RBP eCLIP7.48□□□□□ -1.21
CLRN3-201ENST00000368671 UCP1P25874 307 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 RPL5P46777 297 aaKnown RBP7.48□□□□□ -1.21
CLRN3-201ENST00000368671 EIF2B2P49770 351 aaKnown RBP7.48□□□□□ -1.21
CLRN3-201ENST00000368671 RORCP51449 518 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 PSMG4Q5JS54 123 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 MZT2AQ6P582 158 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 OR4D10Q8NGI6 311 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 OR13C8Q8NGS7 320 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 ZFAND1Q8TCF1 268 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 MARCH1Q8TCQ1 289 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 Q8WTZ3 238 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 EXTL2Q9UBQ6 330 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 TBC1D24Q9ULP9 559 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 CELA1Q9UNI1 258 aa7.48□□□□□ -1.21
CLRN3-201ENST00000368671 HELTA6NFD8 242 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 NXPH3O95157 252 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 RAB3DO95716 219 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 IGKV1-17P01599 117 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 OR5AC1P0C628 307 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 HTR2BP41595 481 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 RND2P52198 227 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 SPCS3P61009 180 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 BSXQ3C1V8 233 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 C16orf54Q6UWD8 224 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 Q6ZRM9 215 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 OR1S2Q8NGQ3 325 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 RAB40CQ96S21 281 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 HEYLQ9NQ87 328 aaPredicted RBP7.47□□□□□ -1.21
CLRN3-201ENST00000368671 MTFP1Q9UDX5 166 aa7.47□□□□□ -1.21
CLRN3-201ENST00000368671 DEFB131BA0A096LNP1 70 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 CEBPZOSA8MTT3 80 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 IL4P05112 153 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 IGLC1P0CG04 106 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 TBPP20226 339 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 OR10J1P30954 320 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 AP2S1P53680 142 aaPredicted RBP7.46□□□□□ -1.22
CLRN3-201ENST00000368671 TAS2R19P59542 299 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 DHODHQ02127 395 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 USF2Q15853 346 aaPredicted RBP7.46□□□□□ -1.22
CLRN3-201ENST00000368671 FAAP20Q6NZ36 180 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 PRSS54Q6PEW0 395 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 TMEM229BQ8NBD8 167 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 CSNK1G2-AS1Q8NCQ2 148 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 SLC24A4Q8NFF2 622 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 TERB2Q8NHR7 220 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 LHFPL5Q8TAF8 219 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 GLMPQ8WWB7 406 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 AP3S1Q92572 193 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 ABHD1Q96SE0 405 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.46□□□□□ -1.22
CLRN3-201ENST00000368671 CACNG5Q9UF02 275 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 C14orf166Q9Y224 244 aaKnown RBP7.46□□□□□ -1.22
CLRN3-201ENST00000368671 AGRNO00468 2067 aa7.46□□□□□ -1.22
CLRN3-201ENST00000368671 VPS13DQ5THJ4 4388 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 TEX13DA0A0J9YY54 714 aaPredicted RBP7.45□□□□□ -1.22
CLRN3-201ENST00000368671 B3GALNT1O75752 331 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 CD74P04233 296 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 SLC25A4P12235 298 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 YPEL3P61236 119 aaPredicted RBP7.45□□□□□ -1.22
CLRN3-201ENST00000368671 MEF2DQ14814 521 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 C12orf74Q32Q52 190 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 C2orf83Q53S99 150 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 STEAP1BQ6NZ63 245 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 FAM219AQ8IW50 185 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 OR52E5Q8NH55 327 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 RNASEH2CQ8TDP1 164 aaKnown RBP7.45□□□□□ -1.22
CLRN3-201ENST00000368671 GPR146Q96CH1 333 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 ACY3Q96HD9 319 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 RNF126Q9BV68 326 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 NAA50Q9GZZ1 169 aaKnown RBP7.45□□□□□ -1.22
CLRN3-201ENST00000368671 TMEM222Q9H0R3 208 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 NAA60Q9H7X0 242 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 XCL2Q9UBD3 114 aa7.45□□□□□ -1.22
CLRN3-201ENST00000368671 DNAH6Q9C0G6 4158 aa7.44□□□□□ -1.22
CLRN3-201ENST00000368671 FAM90A26D6RGX4 464 aa7.44□□□□□ -1.22
CLRN3-201ENST00000368671 CDS2O95674 445 aa7.44□□□□□ -1.22
CLRN3-201ENST00000368671 AMBPP02760 352 aa7.44□□□□□ -1.22
CLRN3-201ENST00000368671 ZNF182P17025 639 aaPredicted RBP7.44□□□□□ -1.22
CLRN3-201ENST00000368671 NUTF2P61970 127 aaKnown RBP7.44□□□□□ -1.22
CLRN3-201ENST00000368671 SNRPD3P62318 126 aaKnown RBP7.44□□□□□ -1.22
CLRN3-201ENST00000368671 ANKRD39Q53RE8 183 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms