RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 LINC00614P0C842 121 aa11.46□□□□□ -0.57
COL6A1-201ENST00000361866 ZNF138P52744 262 aa11.46□□□□□ -0.57
COL6A1-201ENST00000361866 RELQ04864 619 aaPredicted RBP11.46□□□□□ -0.57
COL6A1-201ENST00000361866 CD69Q07108 199 aa11.46□□□□□ -0.57
COL6A1-201ENST00000361866 OR10AG1Q8NH19 301 aa11.46□□□□□ -0.57
COL6A1-201ENST00000361866 GPR82Q96P67 336 aa11.46□□□□□ -0.57
COL6A1-201ENST00000361866 F2Z2F3 143 aa11.46□□□□□ -0.57
COL6A1-201ENST00000361866 MC5RP33032 325 aa11.46□□□□□ -0.57
COL6A1-201ENST00000361866 NIT1Q86X76 327 aa11.46□□□□□ -0.57
COL6A1-201ENST00000361866 FBXL15Q9H469 300 aa11.46□□□□□ -0.57
COL6A1-201ENST00000361866 A0A1W2PRE2 83 aa11.46□□□□□ -0.58
COL6A1-201ENST00000361866 NUPR1O60356 82 aa11.46□□□□□ -0.58
COL6A1-201ENST00000361866 IL4P05112 153 aa11.46□□□□□ -0.58
COL6A1-201ENST00000361866 NUDT10Q8NFP7 164 aa11.46□□□□□ -0.58
COL6A1-201ENST00000361866 NUDT11Q96G61 164 aa11.46□□□□□ -0.58
COL6A1-201ENST00000361866 OSR1Q8TAX0 266 aaPredicted RBP11.46□□□□□ -0.58
COL6A1-201ENST00000361866 HTTP42858 3142 aa11.45□□□□□ -0.58
COL6A1-201ENST00000361866 TDRG1Q3Y452 100 aa11.45□□□□□ -0.58
COL6A1-201ENST00000361866 RPP21Q9H633 154 aaKnown RBP11.45□□□□□ -0.58
COL6A1-201ENST00000361866 SLC25A33Q9BSK2 321 aa11.45□□□□□ -0.58
COL6A1-201ENST00000361866 hDV102S1A0JD36 115 aa11.45□□□□□ -0.58
COL6A1-201ENST00000361866 IGKV1-16P04430 117 aa11.45□□□□□ -0.58
COL6A1-201ENST00000361866 RIPPLY3P57055 190 aa11.45□□□□□ -0.58
COL6A1-201ENST00000361866 SMIM12Q96EX1 92 aa11.45□□□□□ -0.58
COL6A1-201ENST00000361866 KLK15Q9H2R5 256 aa11.45□□□□□ -0.58
COL6A1-201ENST00000361866 SCGB1C2P0DMR2 95 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 FBLN7Q53RD9 439 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 SCGB1D4Q6XE38 83 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 KIAA1549LQ6ZVL6 1849 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 TRAV8-1A0A0A6YYK1 113 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 F5H697 171 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 KIR2DL2P43627 348 aaPredicted RBP11.44□□□□□ -0.58
COL6A1-201ENST00000361866 CX3CL1P78423 397 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 ECSCRQ19T08 205 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 RNFT1Q5M7Z0 435 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 IGHV1-18A0A0C4DH31 117 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 SH2D7A6NKC9 451 aaPredicted RBP11.44□□□□□ -0.58
COL6A1-201ENST00000361866 SRRM5B3KS81 715 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 CD3EP07766 207 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 CD24P25063 80 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 PRCDQ00LT1 54 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 MPV17L2Q567V2 206 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 RAB1CQ92928 201 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 ASCL2Q99929 193 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 Q9H3A6 140 aa11.44□□□□□ -0.58
COL6A1-201ENST00000361866 A0A1B0GUT8 65 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.43□□□□□ -0.58
COL6A1-201ENST00000361866 AREGP15514 252 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 CLEC7AQ9BXN2 247 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 GP6Q9HCN6 339 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 NUP210Q8TEM1 1887 aaPredicted RBP11.43□□□□□ -0.58
COL6A1-201ENST00000361866 C7orf71A4D174 169 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 NPIPB11E5RHQ5 1161 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 IGHV3-23P01764 117 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 Q6ZVH6 145 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 EPDR1Q9UM22 224 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 LY6G6EA0A0G2JKS1 128 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 DNLZQ5SXM8 178 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 CACNG8Q8WXS5 425 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 U3KQA8 63 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 OR10J3Q5JRS4 329 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 FAM90A1Q86YD7 464 aa11.43□□□□□ -0.58
COL6A1-201ENST00000361866 IGKV1D-17A0A075B6S4 117 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 IGHV3-49A0A0A0MS15 119 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 NPPCP23582 126 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 CEACAM3P40198 252 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 FXYD7P58549 80 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 C1orf185Q5T7R7 199 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 TMEM186Q96B77 213 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 UNC80Q8N2C7 3258 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 A0A1W2PS18 150 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 C9JCJ5 164 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 OR4A5Q8NH83 315 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 ATRXP46100 2492 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 A0A1B0GWJ7 208 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 C2orf83Q53S99 150 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 TIMM23BQ5SRD1 257 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 SPANXN1Q5VSR9 72 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 Q6ZPA2 131 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 RBPMS2Q6ZRY4 209 aaKnown RBP11.42□□□□□ -0.58
COL6A1-201ENST00000361866 NUP35Q8NFH5 326 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 SCRT1Q9BWW7 348 aa11.42□□□□□ -0.58
COL6A1-201ENST00000361866 TYMSP04818 313 aa11.41□□□□□ -0.58
COL6A1-201ENST00000361866 TSKUQ8WUA8 353 aa11.41□□□□□ -0.58
COL6A1-201ENST00000361866 FNDC4Q9H6D8 234 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-201ENST00000361866 FOXA2Q9Y261 457 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-201ENST00000361866 FABP2P12104 132 aa11.41□□□□□ -0.58
COL6A1-201ENST00000361866 RPL7P18124 248 aaKnown RBP11.41□□□□□ -0.58
COL6A1-201ENST00000361866 SRSF9Q13242 221 aaKnown RBP eCLIP11.41□□□□□ -0.58
COL6A1-201ENST00000361866 Q1RN00 199 aa11.41□□□□□ -0.58
COL6A1-201ENST00000361866 AMMECR1LQ6DCA0 310 aa11.41□□□□□ -0.58
COL6A1-201ENST00000361866 FAM181BA6NEQ2 426 aa11.4□□□□□ -0.58
COL6A1-201ENST00000361866 H3BUT2 72 aa11.4□□□□□ -0.58
COL6A1-201ENST00000361866 SMIM17P0DL12 118 aa11.4□□□□□ -0.58
COL6A1-201ENST00000361866 TSPOP30536 169 aa11.4□□□□□ -0.58
COL6A1-201ENST00000361866 CRIP3Q6Q6R5 217 aa11.4□□□□□ -0.58
COL6A1-201ENST00000361866 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.4□□□□□ -0.58
COL6A1-201ENST00000361866 COL25A1Q9BXS0 654 aaPredicted RBP11.4□□□□□ -0.58
COL6A1-201ENST00000361866 PEF1Q9UBV8 284 aaKnown RBP11.4□□□□□ -0.58
COL6A1-201ENST00000361866 TRAV8-6A0A0B4J262 113 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms